Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0495
         (618 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    23   1.6  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    23   1.6  
AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.      23   2.1  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      23   2.1  
AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.        22   3.6  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   6.3  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   6.3  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    21   8.3  

>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 210 SDMLIIRDIVAIVRAHKKTAK 272
           +D   +RDI+  +R H  TAK
Sbjct: 373 TDTYFLRDIIFAIRQHAVTAK 393


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 210 SDMLIIRDIVAIVRAHKKTAK 272
           +D   +RDI+  +R H  TAK
Sbjct: 375 TDTYFLRDIIFAIRQHAVTAK 395


>AJ845187-1|CAH60164.1|  515|Tribolium castaneum esterase protein.
          Length = 515

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 210 SDMLIIRDIVAIVRAHKKTAK 272
           +D   +RDI+  +R H  TAK
Sbjct: 373 TDTYFLRDIIFAIRQHAITAK 393


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +3

Query: 210 SDMLIIRDIVAIVRAHKKTAK 272
           +D   +RDI+  +R H  TAK
Sbjct: 375 TDTYFLRDIIFAIRQHAITAK 395


>AY008296-1|AAG22858.1|  556|Tribolium castaneum Dorsal protein.
          Length = 556

 Score = 22.2 bits (45), Expect = 3.6
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 116 VENSDKKNEKAPILLNL 166
           VE SDK+    P LLN+
Sbjct: 368 VEESDKQRTHQPFLLNI 384


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 8/28 (28%), Positives = 17/28 (60%)
 Frame = +1

Query: 151 HPPQLRNISDNKRQSAAAWSPTC*LSEI 234
           +PP  + ++D+   S A  +PT  ++E+
Sbjct: 295 YPPLAQGVNDDAFNSVATPTPTSVMTEL 322


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 6.3
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 3/29 (10%)
 Frame = -1

Query: 600 PTANTPPQAKKANAPASSTVRAS---HLP 523
           P A  PP    + +PAS    AS   H+P
Sbjct: 30  PAAAPPPATTSSGSPASVASNASAPLHIP 58


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 21.0 bits (42), Expect = 8.3
 Identities = 10/27 (37%), Positives = 18/27 (66%), Gaps = 1/27 (3%)
 Frame = +2

Query: 80  QESEIENGKVTAVENSDK-KNEKAPIL 157
           ++ + ++ +  +VE S K KN+ APIL
Sbjct: 125 RQQQKQHNQQQSVEKSSKLKNKSAPIL 151


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 144,917
Number of Sequences: 336
Number of extensions: 3132
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15770591
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)