Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0495
(618 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020238-1|AAH20238.1| 596|Homo sapiens SRP68 protein protein. 69 1e-11
AK074698-1|BAC11145.1| 627|Homo sapiens protein ( Homo sapiens ... 69 1e-11
AF195951-1|AAF24308.1| 619|Homo sapiens signal recognition part... 69 1e-11
M14764-1|AAB59544.1| 427|Homo sapiens nerve growth factor recep... 35 0.26
BC050309-1|AAH50309.1| 427|Homo sapiens nerve growth factor rec... 35 0.26
BC099639-1|AAH99639.3| 401|Homo sapiens heparan sulfate 6-O-sul... 32 1.9
BC099638-1|AAH99638.3| 401|Homo sapiens heparan sulfate 6-O-sul... 32 1.9
BC096240-1|AAH96240.3| 401|Homo sapiens heparan sulfate 6-O-sul... 32 1.9
BC096239-1|AAH96239.3| 401|Homo sapiens heparan sulfate 6-O-sul... 32 1.9
AC017079-2|AAY14736.1| 401|Homo sapiens unknown protein. 32 1.9
AB006179-1|BAA25760.1| 410|Homo sapiens heparan-sulfate 6-sulfo... 32 1.9
BC048964-1|AAH48964.1| 1027|Homo sapiens IQ motif containing H p... 31 3.3
BC039292-1|AAH39292.1| 684|Homo sapiens IQCH protein protein. 31 3.3
BC031041-1|AAH31041.2| 305|Homo sapiens IQCH protein protein. 31 3.3
AY014282-1|AAK27307.2| 1027|Homo sapiens protein kinase NYD-SP5 ... 31 3.3
AK022538-1|BAB14087.1| 621|Homo sapiens protein ( Homo sapiens ... 31 3.3
Z98046-1|CAI42344.1| 1313|Homo sapiens inter-alpha (globulin) in... 29 9.9
AY358170-1|AAQ88537.1| 1313|Homo sapiens ITI-like protein protein. 29 9.9
AL022575-1|CAI42356.1| 1313|Homo sapiens inter-alpha (globulin) ... 29 9.9
>BC020238-1|AAH20238.1| 596|Homo sapiens SRP68 protein protein.
Length = 596
Score = 68.9 bits (161), Expect = 1e-11
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3
Query: 369 VIPLLQAERAWAHAMQLRQEANTEPRKKFHLVSRLKKACAHGQML 503
++ L+ AERAW++AMQL+QEANTEPRK+FHL+SRL+KA H + L
Sbjct: 125 LLVLMDAERAWSYAMQLKQEANTEPRKRFHLLSRLRKAVKHAEEL 169
Score = 62.9 bits (146), Expect = 9e-10
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +2
Query: 77 GQESEIENGKVTAVENSDKKNEKAPILLNLEIFRITRDSQQQHGLRHADYQRYRGYCSR 253
G E EN + +A K N++ L+LEI +I ++SQQQHGLRH D+QRYRGYCSR
Sbjct: 34 GGEENKENERPSA---GSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSR 89
>AK074698-1|BAC11145.1| 627|Homo sapiens protein ( Homo sapiens
cDNA FLJ90217 fis, clone MAMMA1002234, highly similar to
SIGNAL RECOGNITION PARTICLE 68 KD PROTEIN. ).
Length = 627
Score = 68.9 bits (161), Expect = 1e-11
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3
Query: 369 VIPLLQAERAWAHAMQLRQEANTEPRKKFHLVSRLKKACAHGQML 503
++ L+ AERAW++AMQL+QEANTEPRK+FHL+SRL+KA H + L
Sbjct: 125 LLVLMDAERAWSYAMQLKQEANTEPRKRFHLLSRLRKAVKHAEEL 169
Score = 62.9 bits (146), Expect = 9e-10
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +2
Query: 77 GQESEIENGKVTAVENSDKKNEKAPILLNLEIFRITRDSQQQHGLRHADYQRYRGYCSR 253
G E EN + +A K N++ L+LEI +I ++SQQQHGLRH D+QRYRGYCSR
Sbjct: 34 GGEENKENERPSA---GSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSR 89
>AF195951-1|AAF24308.1| 619|Homo sapiens signal recognition
particle 68 protein.
Length = 619
Score = 68.9 bits (161), Expect = 1e-11
Identities = 29/45 (64%), Positives = 39/45 (86%)
Frame = +3
Query: 369 VIPLLQAERAWAHAMQLRQEANTEPRKKFHLVSRLKKACAHGQML 503
++ L+ AERAW++AMQL+QEANTEPRK+FHL+SRL+KA H + L
Sbjct: 117 LLVLMDAERAWSYAMQLKQEANTEPRKRFHLLSRLRKAVKHAEEL 161
Score = 62.9 bits (146), Expect = 9e-10
Identities = 31/59 (52%), Positives = 40/59 (67%)
Frame = +2
Query: 77 GQESEIENGKVTAVENSDKKNEKAPILLNLEIFRITRDSQQQHGLRHADYQRYRGYCSR 253
G E EN + +A K N++ L+LEI +I ++SQQQHGLRH D+QRYRGYCSR
Sbjct: 26 GGEENKENERPSA---GSKANKEFGDSLSLEILQIIKESQQQHGLRHGDFQRYRGYCSR 81
>M14764-1|AAB59544.1| 427|Homo sapiens nerve growth factor receptor
protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.26
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 461 CVSTEESMCTWADAFALCEESGRCEARTVLEAGAFAFLAC 580
CV ++++C A + E +GRCEA V EAG+ +C
Sbjct: 99 CVEADDAVCRCAYGYYQDETTGRCEACRVCEAGSGLVFSC 138
>BC050309-1|AAH50309.1| 427|Homo sapiens nerve growth factor
receptor (TNFR superfamily, member 16) protein.
Length = 427
Score = 34.7 bits (76), Expect = 0.26
Identities = 15/40 (37%), Positives = 23/40 (57%)
Frame = +2
Query: 461 CVSTEESMCTWADAFALCEESGRCEARTVLEAGAFAFLAC 580
CV ++++C A + E +GRCEA V EAG+ +C
Sbjct: 99 CVEADDAVCRCAYGYYQDETTGRCEACRVCEAGSGLVFSC 138
>BC099639-1|AAH99639.3| 401|Homo sapiens heparan sulfate
6-O-sulfotransferase 1 protein.
Length = 401
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -2
Query: 488 CTCFLQSRHKMKLFSRFSVSFLTQLHG----MSPCPLGLQQRYDS 366
CTC+ +R + LFSRFS + LH ++ C G+ R DS
Sbjct: 115 CTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDS 159
>BC099638-1|AAH99638.3| 401|Homo sapiens heparan sulfate
6-O-sulfotransferase 1 protein.
Length = 401
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -2
Query: 488 CTCFLQSRHKMKLFSRFSVSFLTQLHG----MSPCPLGLQQRYDS 366
CTC+ +R + LFSRFS + LH ++ C G+ R DS
Sbjct: 115 CTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDS 159
>BC096240-1|AAH96240.3| 401|Homo sapiens heparan sulfate
6-O-sulfotransferase 1 protein.
Length = 401
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -2
Query: 488 CTCFLQSRHKMKLFSRFSVSFLTQLHG----MSPCPLGLQQRYDS 366
CTC+ +R + LFSRFS + LH ++ C G+ R DS
Sbjct: 115 CTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDS 159
>BC096239-1|AAH96239.3| 401|Homo sapiens heparan sulfate
6-O-sulfotransferase 1 protein.
Length = 401
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -2
Query: 488 CTCFLQSRHKMKLFSRFSVSFLTQLHG----MSPCPLGLQQRYDS 366
CTC+ +R + LFSRFS + LH ++ C G+ R DS
Sbjct: 115 CTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDS 159
>AC017079-2|AAY14736.1| 401|Homo sapiens unknown protein.
Length = 401
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -2
Query: 488 CTCFLQSRHKMKLFSRFSVSFLTQLHG----MSPCPLGLQQRYDS 366
CTC+ +R + LFSRFS + LH ++ C G+ R DS
Sbjct: 115 CTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDS 159
>AB006179-1|BAA25760.1| 410|Homo sapiens heparan-sulfate
6-sulfotransferase protein.
Length = 410
Score = 31.9 bits (69), Expect = 1.9
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
Frame = -2
Query: 488 CTCFLQSRHKMKLFSRFSVSFLTQLHG----MSPCPLGLQQRYDS 366
CTC+ +R + LFSRFS + LH ++ C G+ R DS
Sbjct: 124 CTCYRPNRRETWLFSRFSTGWSCGLHADWTELTNCVPGVLDRRDS 168
>BC048964-1|AAH48964.1| 1027|Homo sapiens IQ motif containing H
protein.
Length = 1027
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 232 ISWLLFAPIRRLRKVLKIPQGDRRHYRRRDVTTTHLTAN 348
I+WLL+ RL+K+LK + +RH + HL AN
Sbjct: 404 IAWLLYCHKTRLKKILK--ESRQRHLENFRIRAKHLAAN 440
>BC039292-1|AAH39292.1| 684|Homo sapiens IQCH protein protein.
Length = 684
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 232 ISWLLFAPIRRLRKVLKIPQGDRRHYRRRDVTTTHLTAN 348
I+WLL+ RL+K+LK + +RH + HL AN
Sbjct: 152 IAWLLYCHKTRLKKILK--ESRQRHLENFRIRAKHLAAN 188
>BC031041-1|AAH31041.2| 305|Homo sapiens IQCH protein protein.
Length = 305
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 232 ISWLLFAPIRRLRKVLKIPQGDRRHYRRRDVTTTHLTAN 348
I+WLL+ RL+K+LK + +RH + HL AN
Sbjct: 231 IAWLLYCHKTRLKKILK--ESRQRHLENFRIRAKHLAAN 267
>AY014282-1|AAK27307.2| 1027|Homo sapiens protein kinase NYD-SP5
protein.
Length = 1027
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 232 ISWLLFAPIRRLRKVLKIPQGDRRHYRRRDVTTTHLTAN 348
I+WLL+ RL+K+LK + +RH + HL AN
Sbjct: 404 IAWLLYCHKTRLKKILK--ESRQRHLENFRIRAKHLAAN 440
>AK022538-1|BAB14087.1| 621|Homo sapiens protein ( Homo sapiens
cDNA FLJ12476 fis, clone NT2RM1000978. ).
Length = 621
Score = 31.1 bits (67), Expect = 3.3
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +1
Query: 232 ISWLLFAPIRRLRKVLKIPQGDRRHYRRRDVTTTHLTAN 348
I+WLL+ RL+K+LK + +RH + HL AN
Sbjct: 156 IAWLLYCHKTRLKKILK--ESRQRHLENFRIRAKHLAAN 192
>Z98046-1|CAI42344.1| 1313|Homo sapiens inter-alpha (globulin)
inhibitor H5-like protein.
Length = 1313
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 256 IRRLRKVLKIPQGDRRHYRRRDVTTTHLTANNAENRLLSYRCCKP 390
IRRL + I + H++ RD TT HL A N L Y P
Sbjct: 560 IRRLWAYVTIGELLDAHFQARDTTTRHLLAAKVLNLSLEYNFVTP 604
>AY358170-1|AAQ88537.1| 1313|Homo sapiens ITI-like protein protein.
Length = 1313
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 256 IRRLRKVLKIPQGDRRHYRRRDVTTTHLTANNAENRLLSYRCCKP 390
IRRL + I + H++ RD TT HL A N L Y P
Sbjct: 560 IRRLWAYVTIGELLDAHFQARDTTTRHLLAAKVLNLSLEYNFVTP 604
>AL022575-1|CAI42356.1| 1313|Homo sapiens inter-alpha (globulin)
inhibitor H5-like protein.
Length = 1313
Score = 29.5 bits (63), Expect = 9.9
Identities = 17/45 (37%), Positives = 21/45 (46%)
Frame = +1
Query: 256 IRRLRKVLKIPQGDRRHYRRRDVTTTHLTANNAENRLLSYRCCKP 390
IRRL + I + H++ RD TT HL A N L Y P
Sbjct: 560 IRRLWAYVTIGELLDAHFQARDTTTRHLLAAKVLNLSLEYNFVTP 604
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,380,331
Number of Sequences: 237096
Number of extensions: 1975425
Number of successful extensions: 12250
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 11953
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12250
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6635341780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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