Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0494
(244 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1... 60 7e-09
UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970; Eukaryot... 60 7e-09
UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome sh... 59 2e-08
UniRef50_Q6AU00 Cluster: Alpha tubulin; n=1; Oryza sativa (japon... 59 2e-08
UniRef50_Q3HRW7 Cluster: Alpha-tubulin-like protein; n=3; Eukary... 59 2e-08
UniRef50_Q3UX10 Cluster: In vitro fertilized eggs cDNA, RIKEN fu... 57 7e-08
UniRef50_UPI00005A03AE Cluster: PREDICTED: similar to tubulin, a... 57 9e-08
UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome sh... 57 9e-08
UniRef50_Q9XFV1 Cluster: Putative uncharacterized protein; n=1; ... 54 6e-07
UniRef50_Q4S633 Cluster: Chromosome 9 SCAF14729, whole genome sh... 52 2e-06
UniRef50_A4H729 Cluster: Alpha tubulin; n=5; Trypanosomatidae|Re... 52 2e-06
UniRef50_A4HVG1 Cluster: Alpha tubulin; n=2; Leishmania|Rep: Alp... 51 6e-06
UniRef50_Q22CD2 Cluster: Tubulin/FtsZ family, GTPase domain cont... 49 2e-05
UniRef50_UPI0000DC0C7D Cluster: UPI0000DC0C7D related cluster; n... 48 5e-05
UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493; Eukaryota... 48 5e-05
UniRef50_Q7PUE2 Cluster: ENSANGP00000013927; n=2; Anopheles gamb... 47 7e-05
UniRef50_Q3SEF9 Cluster: Alpha-tubulin,putative; n=1; Paramecium... 47 7e-05
UniRef50_Q7QW53 Cluster: GLP_457_13116_11626; n=1; Giardia lambl... 46 1e-04
UniRef50_A0EC94 Cluster: Chromosome undetermined scaffold_89, wh... 46 2e-04
UniRef50_A7M6D9 Cluster: Alpha-tubulin; n=1; Dugesia ryukyuensis... 44 9e-04
UniRef50_UPI0000DB78C0 Cluster: PREDICTED: similar to Tubulin al... 42 0.003
UniRef50_UPI0000EB04B1 Cluster: UPI0000EB04B1 related cluster; n... 42 0.003
UniRef50_Q7Z1L8 Cluster: Alpha-tubulin; n=2; Eukaryota|Rep: Alph... 41 0.006
UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1; ... 39 0.019
UniRef50_Q3SEG4 Cluster: Alpha-tubulin,putative; n=1; Paramecium... 39 0.025
UniRef50_A6RQ51 Cluster: Putative uncharacterized protein; n=1; ... 38 0.043
UniRef50_A0BQ86 Cluster: Chromosome undetermined scaffold_120, w... 37 0.075
UniRef50_Q862L2 Cluster: Similar to alpha-tubulin isoform 1; n=1... 36 0.13
UniRef50_UPI00003977B9 Cluster: hypothetical protein Haso0200227... 36 0.17
UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep: Beta-... 36 0.17
UniRef50_Q3SEF7 Cluster: Alpha-tubulin,putative; n=3; Paramecium... 34 0.53
UniRef50_Q23WP5 Cluster: Tubulin/FtsZ family, GTPase domain cont... 34 0.70
UniRef50_UPI0000ECB71B Cluster: UPI0000ECB71B related cluster; n... 33 0.92
UniRef50_Q3SEH2 Cluster: Alpha_tubulin,putative; n=5; Paramecium... 33 1.6
UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain cont... 33 1.6
UniRef50_UPI0000DC0F37 Cluster: UPI0000DC0F37 related cluster; n... 32 2.8
UniRef50_A5HWB6 Cluster: Bacterial tubulin B; n=8; Prosthecobact... 32 2.8
UniRef50_Q4UCK3 Cluster: Tubulin gamma-chain (Gamma-tubulin), pu... 31 3.7
UniRef50_A6G3V1 Cluster: Putative uncharacterized protein; n=1; ... 31 4.9
UniRef50_Q8IK81 Cluster: Tubulin, putative; n=9; Plasmodium|Rep:... 31 4.9
UniRef50_Q3SEH6 Cluster: Iota_tubulin,putative; n=2; Paramecium ... 31 4.9
UniRef50_Q22YZ9 Cluster: Tubulin/FtsZ family, GTPase domain cont... 31 4.9
UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115; Bilateria|... 31 4.9
UniRef50_UPI0000E1EF15 Cluster: PREDICTED: similar to alpha-2-tu... 31 6.5
UniRef50_Q64UZ7 Cluster: Putative uncharacterized protein; n=2; ... 31 6.5
UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-P... 30 8.6
UniRef50_Q24D62 Cluster: Tubulin/FtsZ family, GTPase domain cont... 30 8.6
>UniRef50_Q8N532 Cluster: TUBA1C protein; n=9; Amniota|Rep: TUBA1C
protein - Homo sapiens (Human)
Length = 325
Score = 60.5 bits (140), Expect = 7e-09
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>UniRef50_P68363 Cluster: Tubulin alpha-1B chain; n=970;
Eukaryota|Rep: Tubulin alpha-1B chain - Homo sapiens
(Human)
Length = 451
Score = 60.5 bits (140), Expect = 7e-09
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>UniRef50_Q4S6A2 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=6; Euteleostomi|Rep: Chromosome 9
SCAF14729, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 416
Score = 59.3 bits (137), Expect = 2e-08
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
+RECI +HVGQAGVQIGNACWELYCL
Sbjct: 2 LRECISIHVGQAGVQIGNACWELYCL 27
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 28 EHGIQPDGQMPSD 40
>UniRef50_Q6AU00 Cluster: Alpha tubulin; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Alpha tubulin - Oryza sativa subsp.
japonica (Rice)
Length = 195
Score = 59.3 bits (137), Expect = 2e-08
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +H+GQAG+Q+GNACWELYCL
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCL 26
>UniRef50_Q3HRW7 Cluster: Alpha-tubulin-like protein; n=3;
Eukaryota|Rep: Alpha-tubulin-like protein - Solanum
tuberosum (Potato)
Length = 237
Score = 59.3 bits (137), Expect = 2e-08
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +H+GQAG+Q+GNACWELYCL
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCL 26
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>UniRef50_Q3UX10 Cluster: In vitro fertilized eggs cDNA, RIKEN
full-length enriched library, clone:7420443F16
product:similar to Alpha tubulin; n=4; Murinae|Rep: In
vitro fertilized eggs cDNA, RIKEN full-length enriched
library, clone:7420443F16 product:similar to Alpha
tubulin - Mus musculus (Mouse)
Length = 446
Score = 57.2 bits (132), Expect = 7e-08
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MREC+ +H+GQAGVQIG+ACWELYCL
Sbjct: 1 MRECLSIHIGQAGVQIGDACWELYCL 26
>UniRef50_UPI00005A03AE Cluster: PREDICTED: similar to tubulin,
alpha 1; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to tubulin, alpha 1 - Canis familiaris
Length = 300
Score = 56.8 bits (131), Expect = 9e-08
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 83 RECIYVHVGQAGVQIGNACWELYC 154
RECI +HVGQAGVQIGNACWELYC
Sbjct: 46 RECISIHVGQAGVQIGNACWELYC 69
Score = 30.7 bits (66), Expect = 6.5
Identities = 12/18 (66%), Positives = 13/18 (72%)
Frame = +3
Query: 159 EHGIQPDGQMPTDNDHPG 212
EHGIQPD QMP+D G
Sbjct: 71 EHGIQPDAQMPSDKTTGG 88
>UniRef50_Q4SEQ2 Cluster: Chromosome 3 SCAF14614, whole genome
shotgun sequence; n=2; Euteleostomi|Rep: Chromosome 3
SCAF14614, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 407
Score = 56.8 bits (131), Expect = 9e-08
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2
Query: 83 RECIYVHVGQAGVQIGNACWELYCL 157
RECI +HVGQAG QIGNACWELYCL
Sbjct: 7 RECISIHVGQAGAQIGNACWELYCL 31
Score = 32.7 bits (71), Expect = 1.6
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 32 EHGIQPDGQMPSD 44
>UniRef50_Q9XFV1 Cluster: Putative uncharacterized protein; n=1;
Chlamydomonas sp. HS-5|Rep: Putative uncharacterized
protein - Chlamydomonas sp. HS-5
Length = 91
Score = 54.0 bits (124), Expect = 6e-07
Identities = 20/26 (76%), Positives = 23/26 (88%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE I +H+GQAG Q+GNACWELYCL
Sbjct: 1 MREAISIHIGQAGCQVGNACWELYCL 26
Score = 33.1 bits (72), Expect = 1.2
Identities = 14/23 (60%), Positives = 16/23 (69%)
Frame = +3
Query: 159 EHGIQPDGQMPTDNDHPGWRRIS 227
EHGIQPDGQMP+D G +S
Sbjct: 27 EHGIQPDGQMPSDKTIGGGDDVS 49
>UniRef50_Q4S633 Cluster: Chromosome 9 SCAF14729, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 9 SCAF14729, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 404
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/25 (80%), Positives = 23/25 (92%)
Frame = +2
Query: 83 RECIYVHVGQAGVQIGNACWELYCL 157
RE + +HVGQAGVQIGNACWEL+CL
Sbjct: 3 REVVSIHVGQAGVQIGNACWELFCL 27
>UniRef50_A4H729 Cluster: Alpha tubulin; n=5; Trypanosomatidae|Rep:
Alpha tubulin - Leishmania braziliensis
Length = 267
Score = 52.4 bits (120), Expect = 2e-06
Identities = 19/26 (73%), Positives = 23/26 (88%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE I +H+GQAG Q+GNACWEL+CL
Sbjct: 35 MREAICIHIGQAGCQVGNACWELFCL 60
Score = 30.7 bits (66), Expect = 6.5
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDG MP+D
Sbjct: 61 EHGIQPDGSMPSD 73
>UniRef50_A4HVG1 Cluster: Alpha tubulin; n=2; Leishmania|Rep: Alpha
tubulin - Leishmania infantum
Length = 327
Score = 50.8 bits (116), Expect = 6e-06
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE I +H+GQAG Q+GN CWEL+CL
Sbjct: 93 MREAICIHIGQAGCQVGNTCWELFCL 118
Score = 30.7 bits (66), Expect = 6.5
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDG MP+D
Sbjct: 119 EHGIQPDGSMPSD 131
>UniRef50_Q22CD2 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 443
Score = 49.2 bits (112), Expect = 2e-05
Identities = 16/26 (61%), Positives = 23/26 (88%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
M E I +H+GQ+G+Q+GN+CWEL+CL
Sbjct: 1 MEEIISIHIGQSGIQVGNSCWELFCL 26
>UniRef50_UPI0000DC0C7D Cluster: UPI0000DC0C7D related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0C7D UniRef100 entry -
Rattus norvegicus
Length = 366
Score = 47.6 bits (108), Expect = 5e-05
Identities = 17/27 (62%), Positives = 22/27 (81%)
Frame = +2
Query: 74 IKMRECIYVHVGQAGVQIGNACWELYC 154
+ M E I +++GQAG+QI NACWELYC
Sbjct: 3 LNMHEYISIYIGQAGIQISNACWELYC 29
>UniRef50_P09733 Cluster: Tubulin alpha-1 chain; n=493;
Eukaryota|Rep: Tubulin alpha-1 chain - Saccharomyces
cerevisiae (Baker's yeast)
Length = 447
Score = 47.6 bits (108), Expect = 5e-05
Identities = 20/26 (76%), Positives = 22/26 (84%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE I ++VGQAG QIGNACWELY L
Sbjct: 1 MREVISINVGQAGCQIGNACWELYSL 26
>UniRef50_Q7PUE2 Cluster: ENSANGP00000013927; n=2; Anopheles
gambiae|Rep: ENSANGP00000013927 - Anopheles gambiae str.
PEST
Length = 89
Score = 47.2 bits (107), Expect = 7e-05
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +2
Query: 83 RECIYVHVGQAGVQIGNACW 142
RECI VHVGQAGVQIGNACW
Sbjct: 1 RECISVHVGQAGVQIGNACW 20
>UniRef50_Q3SEF9 Cluster: Alpha-tubulin,putative; n=1; Paramecium
tetraurelia|Rep: Alpha-tubulin,putative - Paramecium
tetraurelia
Length = 551
Score = 47.2 bits (107), Expect = 7e-05
Identities = 18/26 (69%), Positives = 23/26 (88%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE I +H+GQAG+QIGN+ WEL+CL
Sbjct: 1 MREIISLHIGQAGLQIGNSLWELFCL 26
>UniRef50_Q7QW53 Cluster: GLP_457_13116_11626; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_457_13116_11626 - Giardia lamblia
ATCC 50803
Length = 496
Score = 46.4 bits (105), Expect = 1e-04
Identities = 21/30 (70%), Positives = 25/30 (83%)
Frame = -1
Query: 166 PCSQAVKLPAGITDLDSGLANVYIDALTHF 77
P +AV+LPAG+ DLDSGLA+V DALTHF
Sbjct: 451 PVLEAVELPAGVADLDSGLADVDRDALTHF 480
>UniRef50_A0EC94 Cluster: Chromosome undetermined scaffold_89, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_89,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 624
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/26 (69%), Positives = 20/26 (76%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE + HVGQAG+QIGN WEL CL
Sbjct: 1 MREILQFHVGQAGIQIGNTAWELLCL 26
>UniRef50_A7M6D9 Cluster: Alpha-tubulin; n=1; Dugesia
ryukyuensis|Rep: Alpha-tubulin - Dugesia ryukyuensis
Length = 534
Score = 43.6 bits (98), Expect = 9e-04
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE I ++VGQAG+Q+ NA WEL+C+
Sbjct: 1 MREVISINVGQAGIQMANAAWELFCI 26
>UniRef50_UPI0000DB78C0 Cluster: PREDICTED: similar to Tubulin
alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
M-alpha-6); n=1; Apis mellifera|Rep: PREDICTED: similar
to Tubulin alpha-6 chain (Alpha-tubulin 6)
(Alpha-tubulin isotype M-alpha-6) - Apis mellifera
Length = 542
Score = 41.9 bits (94), Expect = 0.003
Identities = 15/24 (62%), Positives = 19/24 (79%)
Frame = +2
Query: 86 ECIYVHVGQAGVQIGNACWELYCL 157
E I + +GQAG Q+ NACWEL+CL
Sbjct: 6 EIITIFIGQAGTQLANACWELFCL 29
>UniRef50_UPI0000EB04B1 Cluster: UPI0000EB04B1 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB04B1 UniRef100
entry - Canis familiaris
Length = 387
Score = 41.5 bits (93), Expect = 0.003
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 110 QAGVQIGNACWELYCL 157
QAGVQIGNACWELYCL
Sbjct: 13 QAGVQIGNACWELYCL 28
>UniRef50_Q7Z1L8 Cluster: Alpha-tubulin; n=2; Eukaryota|Rep:
Alpha-tubulin - Schmidtea polychroa (Freshwater
planarian flatworm) (Dugesiapolychroa)
Length = 489
Score = 40.7 bits (91), Expect = 0.006
Identities = 14/25 (56%), Positives = 21/25 (84%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
M+E I +++GQAG+Q+ NA WEL+C
Sbjct: 1 MKEIICINIGQAGIQMANAIWELFC 25
>UniRef50_Q5B300 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 804
Score = 39.1 bits (87), Expect = 0.019
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +2
Query: 95 YVHVGQAGVQIGNACWELYCL 157
++H+GQAG Q+GNA WELY L
Sbjct: 478 HLHIGQAGTQMGNAAWELYLL 498
>UniRef50_Q3SEG4 Cluster: Alpha-tubulin,putative; n=1; Paramecium
tetraurelia|Rep: Alpha-tubulin,putative - Paramecium
tetraurelia
Length = 461
Score = 38.7 bits (86), Expect = 0.025
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE I H GQ+G Q+ + WELYCL
Sbjct: 1 MREIISFHFGQSGAQLASPLWELYCL 26
>UniRef50_A6RQ51 Cluster: Putative uncharacterized protein; n=1;
Botryotinia fuckeliana B05.10|Rep: Putative
uncharacterized protein - Botryotinia fuckeliana B05.10
Length = 573
Score = 37.9 bits (84), Expect = 0.043
Identities = 14/28 (50%), Positives = 21/28 (75%)
Frame = +2
Query: 74 IKMRECIYVHVGQAGVQIGNACWELYCL 157
I ++ + +H+GQAG Q+GN+ WELY L
Sbjct: 5 ITVQLILTLHIGQAGTQLGNSAWELYLL 32
>UniRef50_A0BQ86 Cluster: Chromosome undetermined scaffold_120,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_120,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 289
Score = 37.1 bits (82), Expect = 0.075
Identities = 15/35 (42%), Positives = 26/35 (74%), Gaps = 1/35 (2%)
Frame = +2
Query: 56 HRKETQIKMRE-CIYVHVGQAGVQIGNACWELYCL 157
H+ +++ K+ E I ++ GQAG+++GN CWEL+ L
Sbjct: 40 HQIQSENKLDERIISLYKGQAGIELGNNCWELFVL 74
>UniRef50_Q862L2 Cluster: Similar to alpha-tubulin isoform 1; n=1;
Bos taurus|Rep: Similar to alpha-tubulin isoform 1 - Bos
taurus (Bovine)
Length = 99
Score = 36.3 bits (80), Expect = 0.13
Identities = 19/32 (59%), Positives = 20/32 (62%)
Frame = +3
Query: 81 CVSASMYTLAKPESRSVMPAGSFTACEHGIQP 176
CVSAS TLA+ SRS MPAGS TA P
Sbjct: 1 CVSASPSTLARLVSRSAMPAGSSTAWNTAFSP 32
Score = 30.3 bits (65), Expect = 8.6
Identities = 16/26 (61%), Positives = 18/26 (69%)
Frame = +1
Query: 160 STASSLMARCPQTMTIRGGDEYPFNT 237
+TA S MARC T TI GGD+ FNT
Sbjct: 27 NTAFSPMARCQVTKTIGGGDD-SFNT 51
>UniRef50_UPI00003977B9 Cluster: hypothetical protein Haso02002277;
n=1; Haemophilus somnus 2336|Rep: hypothetical protein
Haso02002277 - Haemophilus somnus 2336
Length = 198
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = -1
Query: 157 QAVKLPAGITDLDSGLANVYIDALTH 80
+AV+LPA ++DLD+GLA+V DAL H
Sbjct: 154 EAVELPARVSDLDTGLADVDRDALPH 179
>UniRef50_Q26236 Cluster: Beta-tubulin; n=5; Eukaryota|Rep:
Beta-tubulin - Reticulomyxa filosa
Length = 473
Score = 35.9 bits (79), Expect = 0.17
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
+RE ++V VGQ G QIGN WE C
Sbjct: 2 VREIVHVQVGQCGNQIGNVFWETMC 26
>UniRef50_Q3SEF7 Cluster: Alpha-tubulin,putative; n=3; Paramecium
tetraurelia|Rep: Alpha-tubulin,putative - Paramecium
tetraurelia
Length = 426
Score = 34.3 bits (75), Expect = 0.53
Identities = 13/24 (54%), Positives = 17/24 (70%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELY 151
M I++H+G AGV IGN W+LY
Sbjct: 1 MCSAIHLHIGGAGVMIGNELWKLY 24
>UniRef50_Q23WP5 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 450
Score = 33.9 bits (74), Expect = 0.70
Identities = 11/25 (44%), Positives = 19/25 (76%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
M++ I + +GQ G++IGN W+L+C
Sbjct: 1 MKQIITICLGQCGIRIGNQVWKLFC 25
>UniRef50_UPI0000ECB71B Cluster: UPI0000ECB71B related cluster; n=1;
Gallus gallus|Rep: UPI0000ECB71B UniRef100 entry -
Gallus gallus
Length = 57
Score = 33.5 bits (73), Expect = 0.92
Identities = 13/19 (68%), Positives = 15/19 (78%)
Frame = -1
Query: 211 PGWSLSVGIWPSGWMPCSQ 155
P LS+GI PSGWMPCS+
Sbjct: 23 PPMVLSLGICPSGWMPCSR 41
Score = 32.3 bits (70), Expect = 2.1
Identities = 14/17 (82%), Positives = 14/17 (82%)
Frame = -2
Query: 156 RQ*SSQQALPIWTPAWP 106
RQ SSQ ALPI TPAWP
Sbjct: 41 RQYSSQHALPICTPAWP 57
>UniRef50_Q3SEH2 Cluster: Alpha_tubulin,putative; n=5; Paramecium
tetraurelia|Rep: Alpha_tubulin,putative - Paramecium
tetraurelia
Length = 425
Score = 32.7 bits (71), Expect = 1.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELY 151
M ++H+G AGV IG+ W+LY
Sbjct: 1 MSSAFHIHIGGAGVMIGDMLWQLY 24
>UniRef50_Q227Z6 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 436
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/22 (59%), Positives = 16/22 (72%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWE 145
MRE + + +GQAG QIG A WE
Sbjct: 1 MREILNIQIGQAGNQIGTAYWE 22
>UniRef50_UPI0000DC0F37 Cluster: UPI0000DC0F37 related cluster; n=1;
Rattus norvegicus|Rep: UPI0000DC0F37 UniRef100 entry -
Rattus norvegicus
Length = 410
Score = 31.9 bits (69), Expect = 2.8
Identities = 12/15 (80%), Positives = 12/15 (80%)
Frame = +2
Query: 113 AGVQIGNACWELYCL 157
A QI NACWELYCL
Sbjct: 18 AWCQISNACWELYCL 32
>UniRef50_A5HWB6 Cluster: Bacterial tubulin B; n=8;
Prosthecobacter|Rep: Bacterial tubulin B -
Prosthecobacter vanneervenii
Length = 442
Score = 31.9 bits (69), Expect = 2.8
Identities = 15/34 (44%), Positives = 19/34 (55%)
Frame = +2
Query: 47 TFKHRKETQIKMRECIYVHVGQAGVQIGNACWEL 148
T KHR +RE + +HVGQ G QI + W L
Sbjct: 8 TDKHRFFGGTPVREILSIHVGQCGNQIADRFWRL 41
>UniRef50_Q4UCK3 Cluster: Tubulin gamma-chain (Gamma-tubulin),
putative; n=2; Theileria|Rep: Tubulin gamma-chain
(Gamma-tubulin), putative - Theileria annulata
Length = 490
Score = 31.5 bits (68), Expect = 3.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 83 RECIYVHVGQAGVQIGNACWELYCL 157
+E + +HVGQ G IGN W CL
Sbjct: 3 KEIVTLHVGQCGNNIGNEFWNQICL 27
>UniRef50_A6G3V1 Cluster: Putative uncharacterized protein; n=1;
Plesiocystis pacifica SIR-1|Rep: Putative
uncharacterized protein - Plesiocystis pacifica SIR-1
Length = 556
Score = 31.1 bits (67), Expect = 4.9
Identities = 16/41 (39%), Positives = 20/41 (48%), Gaps = 6/41 (14%)
Frame = -1
Query: 214 HPGWSL------SVGIWPSGWMPCSQAVKLPAGITDLDSGL 110
HPGWSL S W W P + + + AG+T LD L
Sbjct: 66 HPGWSLVRRLDLSHAHWAKPWRPATLSSEAGAGLTQLDLNL 106
>UniRef50_Q8IK81 Cluster: Tubulin, putative; n=9; Plasmodium|Rep:
Tubulin, putative - Plasmodium falciparum (isolate 3D7)
Length = 519
Score = 31.1 bits (67), Expect = 4.9
Identities = 11/23 (47%), Positives = 17/23 (73%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
+RE I++HVGQ G Q+G+ W +
Sbjct: 2 VREIIFLHVGQCGNQLGHEFWSV 24
>UniRef50_Q3SEH6 Cluster: Iota_tubulin,putative; n=2; Paramecium
tetraurelia|Rep: Iota_tubulin,putative - Paramecium
tetraurelia
Length = 408
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/21 (57%), Positives = 16/21 (76%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACW 142
M++ I + VGQ+G QIGNA W
Sbjct: 1 MKQIITIQVGQSGNQIGNAIW 21
>UniRef50_Q22YZ9 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 498
Score = 31.1 bits (67), Expect = 4.9
Identities = 14/23 (60%), Positives = 15/23 (65%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE I + VGQ G QIG WEL
Sbjct: 1 MRELITIQVGQCGNQIGAKFWEL 23
>UniRef50_P52275 Cluster: Tubulin beta-2 chain; n=115;
Bilateria|Rep: Tubulin beta-2 chain - Caenorhabditis
elegans
Length = 450
Score = 31.1 bits (67), Expect = 4.9
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE ++V GQ G QIG+ WE+
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEV 23
>UniRef50_UPI0000E1EF15 Cluster: PREDICTED: similar to
alpha-2-tubulin; n=1; Pan troglodytes|Rep: PREDICTED:
similar to alpha-2-tubulin - Pan troglodytes
Length = 137
Score = 30.7 bits (66), Expect = 6.5
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +2
Query: 125 IGNACWELYCL 157
+GNACWELYCL
Sbjct: 1 MGNACWELYCL 11
>UniRef50_Q64UZ7 Cluster: Putative uncharacterized protein; n=2;
Bacteroides fragilis|Rep: Putative uncharacterized
protein - Bacteroides fragilis
Length = 790
Score = 30.7 bits (66), Expect = 6.5
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = -1
Query: 175 GWMPCSQAVKLPAGITDLDSGLANVYIDALT 83
GWM S+ + P+ ITD+ SGL + + A+T
Sbjct: 119 GWMHRSRLILSPSSITDVQSGLHDKLLTAIT 149
>UniRef50_Q9VAX7 Cluster: CG4869-PA; n=8; Eukaryota|Rep: CG4869-PA -
Drosophila melanogaster (Fruit fly)
Length = 522
Score = 30.3 bits (65), Expect = 8.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE +++ GQ G QIG+ WE+
Sbjct: 1 MREIVHLQAGQCGNQIGSKFWEI 23
>UniRef50_Q24D62 Cluster: Tubulin/FtsZ family, GTPase domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Tubulin/FtsZ family, GTPase domain containing
protein - Tetrahymena thermophila SB210
Length = 459
Score = 30.3 bits (65), Expect = 8.6
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
MRE I + +GQ G +IG WE C
Sbjct: 1 MREIINLQIGQGGNKIGQCFWESLC 25
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,997,107
Number of Sequences: 1657284
Number of extensions: 4912126
Number of successful extensions: 14628
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 14356
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14627
length of database: 575,637,011
effective HSP length: 59
effective length of database: 477,857,255
effective search space used: 10035002355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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