Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0494
(244 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_02_0058 + 7879859-7879951,7880844-7881078,7881165-7881535,788... 59 4e-10
03_05_0974 + 29324025-29324117,29325064-29325298,29325385-293257... 59 4e-10
07_03_0994 + 23190344-23190456,23191367-23191581,23191663-231918... 55 7e-09
03_02_0186 - 6243487-6243799,6243892-6244400,6244495-6244557,624... 54 2e-08
05_04_0306 + 20058640-20059159,20060406-20060819,20060921-200611... 36 0.006
01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349 32 0.056
09_03_0118 - 12492206-12492415,12492746-12492816,12493611-124936... 32 0.074
06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379 31 0.13
03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998 31 0.13
03_05_0575 + 25747813-25748206,25748567-25748614,25750296-257505... 31 0.13
03_01_0034 + 318432-318825,318902-319851 31 0.13
02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467 31 0.13
01_06_1060 + 34162161-34162554,34162613-34162675,34163262-341635... 31 0.13
05_01_0412 - 3248405-3248458,3248533-3248637,3248950-3249078,324... 30 0.30
09_02_0383 - 8259156-8261843 29 0.69
01_01_0524 - 3845637-3845727,3845803-3845896,3846415-3846497,384... 28 1.2
09_02_0379 - 8210401-8210567,8210944-8213827 27 1.6
08_02_0019 - 11277241-11277559,11277819-11277951,11277987-112781... 27 1.6
10_08_0501 - 18365871-18366170,18366190-18366372,18366458-18366634 27 2.1
05_01_0235 - 1768049-1769634,1770695-1770815,1770965-1771033,177... 27 2.8
04_04_0294 + 24204563-24204748,24205531-24205620,24205980-242062... 27 2.8
07_03_0741 - 21107566-21107838,21107964-21108102,21108189-211084... 26 3.7
04_04_1399 - 33249210-33249359,33249521-33249597,33249735-332498... 26 3.7
03_05_0870 - 28394857-28395056,28395166-28395361 26 3.7
03_02_0924 + 12429764-12430120,12430562-12430637,12430803-124308... 26 3.7
01_05_0685 + 24273331-24273569,24275429-24275465,24275739-242758... 26 3.7
04_04_0234 - 23805383-23805502,23805652-23805733,23805820-238060... 26 4.9
04_01_0015 - 235068-235231,238714-239701 26 4.9
01_06_0293 - 28254673-28254878,28255189-28255306,28255767-282559... 26 4.9
07_03_0738 + 21093024-21093454,21093540-21093964,21094076-210942... 25 6.4
05_01_0125 - 853691-853984,854027-854659 25 6.4
01_06_0595 - 30485460-30486097,30486721-30487179,30487339-304875... 25 6.4
01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871 25 6.4
10_08_0634 - 19452980-19453206,19453310-19453385 25 8.5
06_03_1314 + 29266320-29266346,29266463-29266556,29266663-292667... 25 8.5
05_01_0191 - 1380872-1382029 25 8.5
04_03_0994 - 21514495-21515610 25 8.5
01_05_0793 + 25278846-25279504,25279598-25279702,25280949-252810... 25 8.5
>11_02_0058 +
7879859-7879951,7880844-7881078,7881165-7881535,
7881648-7882304
Length = 451
Score = 59.3 bits (137), Expect = 4e-10
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +H+GQAG+Q+GNACWELYCL
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCL 26
Score = 31.5 bits (68), Expect = 0.098
Identities = 12/13 (92%), Positives = 12/13 (92%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP D
Sbjct: 27 EHGIQPDGQMPGD 39
>03_05_0974 +
29324025-29324117,29325064-29325298,29325385-29325755,
29325864-29326520
Length = 451
Score = 59.3 bits (137), Expect = 4e-10
Identities = 21/26 (80%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +H+GQAG+Q+GNACWELYCL
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCL 26
Score = 29.5 bits (63), Expect = 0.40
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQ DGQMP+D
Sbjct: 27 EHGIQADGQMPSD 39
>07_03_0994 +
23190344-23190456,23191367-23191581,23191663-23191862,
23192420-23192928,23193048-23193363
Length = 450
Score = 55.2 bits (127), Expect = 7e-09
Identities = 20/26 (76%), Positives = 24/26 (92%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE I +H+GQAG+Q+GNACWELYCL
Sbjct: 1 MREIISIHIGQAGIQVGNACWELYCL 26
Score = 29.1 bits (62), Expect = 0.52
Identities = 10/13 (76%), Positives = 12/13 (92%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGI+PDG MP+D
Sbjct: 27 EHGIEPDGTMPSD 39
>03_02_0186 -
6243487-6243799,6243892-6244400,6244495-6244557,
6245482-6245681,6246125-6246519,6246776-6246888
Length = 530
Score = 54.0 bits (124), Expect = 2e-08
Identities = 19/26 (73%), Positives = 24/26 (92%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE I +H+GQAG+Q+GN+CWELYCL
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCL 26
Score = 29.1 bits (62), Expect = 0.52
Identities = 11/13 (84%), Positives = 11/13 (84%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDG MP D
Sbjct: 27 EHGIQPDGLMPRD 39
>05_04_0306 +
20058640-20059159,20060406-20060819,20060921-20061190,
20062179-20062849
Length = 624
Score = 35.5 bits (78), Expect = 0.006
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +2
Query: 62 KETQIKMRECIYVHVGQAGVQIGNACWELYC 154
K+ + KMRE +++ GQ G QIG+ WE+ C
Sbjct: 175 KKGEEKMREILHIQGGQCGNQIGSKFWEVVC 205
>01_02_0004 - 10097759-10098438,10098973-10099242,10099956-10100349
Length = 447
Score = 32.3 bits (70), Expect = 0.056
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
MRE +++ GQ G QIG+ WE+ C
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVC 25
>09_03_0118 -
12492206-12492415,12492746-12492816,12493611-12493634,
12494061-12494114,12494803-12496345
Length = 633
Score = 31.9 bits (69), Expect = 0.074
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = -3
Query: 221 SSPPRMVIVCGHLAIRLDAVLTGSKAPSRHYRSGLRLGQRVHRCTHAF 78
+ PP ++CG++++ + + K S L+ G + HRC H F
Sbjct: 534 TKPPNPDVLCGYISLAIHSTFLRVKYLLSCNLSILKYGHKFHRCIHTF 581
>06_03_1086 - 27494238-27494914,27495471-27495740,27495986-27496379
Length = 446
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
MRE +++ GQ G QIG WE+ C
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVIC 25
>03_06_0176 + 32158462-32158855,32159960-32160229,32160328-32160998
Length = 444
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
MRE +++ GQ G QIG WE+ C
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVIC 25
>03_05_0575 +
25747813-25748206,25748567-25748614,25750296-25750565,
25750658-25751334
Length = 462
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
MRE +++ GQ G QIG WE+ C
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVIC 25
>03_01_0034 + 318432-318825,318902-319851
Length = 447
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
MRE +++ GQ G QIG WE+ C
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVC 25
>02_01_0499 + 3619909-3620302,3621123-3621392,3621788-3622467
Length = 447
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
MRE +++ GQ G QIG WE+ C
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVIC 25
>01_06_1060 +
34162161-34162554,34162613-34162675,34163262-34163531,
34163944-34164623
Length = 468
Score = 31.1 bits (67), Expect = 0.13
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYC 154
MRE +++ GQ G QIG WE+ C
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVC 25
>05_01_0412 -
3248405-3248458,3248533-3248637,3248950-3249078,
3249279-3249353,3249520-3249624,3249714-3249767,
3249970-3250370,3250583-3250694,3250886-3251086,
3251844-3251972
Length = 454
Score = 29.9 bits (64), Expect = 0.30
Identities = 13/25 (52%), Positives = 15/25 (60%)
Frame = +2
Query: 83 RECIYVHVGQAGVQIGNACWELYCL 157
RE I + VGQ G QIG W+ CL
Sbjct: 3 REIITIQVGQCGNQIGMEFWKQLCL 27
>09_02_0383 - 8259156-8261843
Length = 895
Score = 28.7 bits (61), Expect = 0.69
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = -1
Query: 136 GITDLDSGLANVYIDALTHFDLSFFSMLKCRI 41
G+TDL + Y++ H DLSF SMLKC I
Sbjct: 790 GLTDLTWIIKLPYLE---HLDLSFCSMLKCII 818
>01_01_0524 -
3845637-3845727,3845803-3845896,3846415-3846497,
3846587-3846737,3847113-3847217,3847351-3847420,
3847551-3847587,3848155-3848257,3848441-3848480
Length = 257
Score = 27.9 bits (59), Expect = 1.2
Identities = 9/19 (47%), Positives = 16/19 (84%)
Frame = -1
Query: 202 SLSVGIWPSGWMPCSQAVK 146
+LSV + SGW+PC++++K
Sbjct: 154 NLSVSVGLSGWLPCARSLK 172
>09_02_0379 - 8210401-8210567,8210944-8213827
Length = 1016
Score = 27.5 bits (58), Expect = 1.6
Identities = 13/21 (61%), Positives = 14/21 (66%)
Frame = -1
Query: 103 VYIDALTHFDLSFFSMLKCRI 41
V + L H DLSF SMLKC I
Sbjct: 783 VKLPYLEHLDLSFCSMLKCII 803
>08_02_0019 -
11277241-11277559,11277819-11277951,11277987-11278179,
11278382-11278517,11278776-11278927
Length = 310
Score = 27.5 bits (58), Expect = 1.6
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +3
Query: 39 LILHLSIEKKLKS-KCVSASMYTLAKPESRSVMPAGSFTACEHGIQPDGQMPTDNDHPGW 215
L L+ S K+KS KC+S+S Y+L +VM G+ T + G + + W
Sbjct: 147 LTLYSSQHTKVKSRKCMSSSFYSLHMMVGMAVMEVGAPTTIIERL--SGTLEGQEERSQW 204
Query: 216 R 218
R
Sbjct: 205 R 205
>10_08_0501 - 18365871-18366170,18366190-18366372,18366458-18366634
Length = 219
Score = 27.1 bits (57), Expect = 2.1
Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -1
Query: 220 RLHPGWSLSVGI---WPSGWMPCSQAVKLP 140
RLHP SV P GWMPC A+ +P
Sbjct: 97 RLHPSRRPSVPPPEERPRGWMPCPAAMAMP 126
>05_01_0235 -
1768049-1769634,1770695-1770815,1770965-1771033,
1771199-1771323,1771613-1771712,1771806-1771910,
1772559-1772657,1772751-1772867
Length = 773
Score = 26.6 bits (56), Expect = 2.8
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +1
Query: 121 PDR*CLLGALLPVSTASSL-MARCPQTMTIR 210
P CLL ALLPV+++SS + R P T +R
Sbjct: 4 PSPPCLLRALLPVASSSSRGLRRRPTTSLLR 34
>04_04_0294 +
24204563-24204748,24205531-24205620,24205980-24206211,
24207180-24207457,24207576-24207647,24208054-24208295,
24208781-24209197,24209296-24209497,24209624-24209738,
24209821-24209906,24210235-24210354,24210431-24210519,
24210588-24210669,24211072-24211263,24211546-24211668
Length = 841
Score = 26.6 bits (56), Expect = 2.8
Identities = 13/46 (28%), Positives = 21/46 (45%)
Frame = +3
Query: 51 LSIEKKLKSKCVSASMYTLAKPESRSVMPAGSFTACEHGIQPDGQM 188
+ +EK + KCV A +++L E RS C + P Q+
Sbjct: 109 ICLEKNYQEKCVLALVHSLQSYEDRSPHRKSKALDCSSSLMPRYQL 154
>07_03_0741 -
21107566-21107838,21107964-21108102,21108189-21108426,
21108629-21108836,21108945-21109066,21109146-21109271,
21109356-21109774,21109844-21110268
Length = 649
Score = 26.2 bits (55), Expect = 3.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 142 PAGITDLDSGLANVYI 95
PAGI D D G+ N Y+
Sbjct: 21 PAGIADCDEGVGNTYV 36
>04_04_1399 -
33249210-33249359,33249521-33249597,33249735-33249814,
33249904-33250094,33250183-33250469,33250595-33250721,
33250878-33250994,33251085-33251198,33251510-33251671,
33252909-33252974,33253098-33253269,33253377-33253584,
33253728-33253776,33254132-33254305
Length = 657
Score = 26.2 bits (55), Expect = 3.7
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +3
Query: 147 FTACEHGIQPDGQMPTDNDHPGWRRISFQHYY 242
F A +HGI GQ+ + P W ++ F Y
Sbjct: 306 FKAQKHGISIIGQLKCGLNRPSWDKLLFDPQY 337
>03_05_0870 - 28394857-28395056,28395166-28395361
Length = 131
Score = 26.2 bits (55), Expect = 3.7
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = -1
Query: 208 GWSLSVGIWPSG 173
GWSL G WPSG
Sbjct: 45 GWSLGSGSWPSG 56
>03_02_0924 +
12429764-12430120,12430562-12430637,12430803-12430849,
12431850-12431962,12432056-12432129,12432258-12432353,
12432440-12432559,12432660-12432893,12433486-12433634,
12434145-12434301,12434387-12434542,12435359-12435735,
12435871-12436020,12437071-12437253,12437440-12437643,
12437869-12437975,12438253-12438406,12438796-12438917,
12439541-12439787
Length = 1040
Score = 26.2 bits (55), Expect = 3.7
Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Frame = -1
Query: 208 GW--SLSVGIWPSGWMPCSQAVKLPAGITDLDSGLANVY 98
GW SLS G+ G S A I DSGL N+Y
Sbjct: 386 GWASSLSAGVGTDGTQRSSYAYIFEMSIRLTDSGLKNLY 424
>01_05_0685 +
24273331-24273569,24275429-24275465,24275739-24275808,
24275978-24276082,24276205-24276355,24276454-24276536,
24276619-24276712,24276796-24276883
Length = 288
Score = 26.2 bits (55), Expect = 3.7
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -1
Query: 202 SLSVGIWPSGWMPCSQAVK 146
+LS I SGW+PCS+ +K
Sbjct: 186 TLSAVIGLSGWLPCSRTLK 204
>04_04_0234 -
23805383-23805502,23805652-23805733,23805820-23806088,
23806384-23806524,23806751-23806936,23807186-23807422,
23807505-23807720,23807816-23808146,23808257-23808369,
23808691-23808996,23809078-23809187,23810226-23810363,
23811230-23811497
Length = 838
Score = 25.8 bits (54), Expect = 4.9
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -1
Query: 187 IWPSGWMPCSQAVKLPAGITDLD 119
+ P G+ CS AV +P G +D D
Sbjct: 798 LMPHGFFNCSPAVDVPPGSSDAD 820
>04_01_0015 - 235068-235231,238714-239701
Length = 383
Score = 25.8 bits (54), Expect = 4.9
Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Frame = +3
Query: 93 SMYTLAKPESRSVMPAGSFTACEHGIQP--DGQMPTDN 200
S+YT RS G FT C QP D + P+D+
Sbjct: 299 SLYTQPVDPCRSYDTCGPFTICNGNSQPFCDSRWPSDS 336
>01_06_0293 -
28254673-28254878,28255189-28255306,28255767-28255961,
28256701-28256800,28256887-28256972,28257078-28257239,
28257965-28258101,28258233-28258281,28258688-28258746,
28258862-28258896,28259384-28259433,28260173-28260332,
28260898-28260963,28261065-28261162,28261649-28261696,
28262114-28262242,28262667-28262769,28262858-28262954,
28263181-28263241,28263659-28263740,28263845-28263962,
28264039-28266325
Length = 1481
Score = 25.8 bits (54), Expect = 4.9
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = -1
Query: 229 KDIRLHPGWSLSVGIWPSGWM 167
K+I + G++ +VG P+GWM
Sbjct: 310 KEIMVERGYNKAVGFVPTGWM 330
>07_03_0738 +
21093024-21093454,21093540-21093964,21094076-21094201,
21094277-21094398,21094496-21094706,21095038-21095275,
21095351-21095498,21095640-21095975
Length = 678
Score = 25.4 bits (53), Expect = 6.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 142 PAGITDLDSGLANVYI 95
PAGI D D G+ N Y+
Sbjct: 22 PAGIADCDLGVGNTYV 37
>05_01_0125 - 853691-853984,854027-854659
Length = 308
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/35 (28%), Positives = 19/35 (54%)
Frame = -1
Query: 181 PSGWMPCSQAVKLPAGITDLDSGLANVYIDALTHF 77
P GW PC+ ++PA + GL V+++ ++
Sbjct: 218 PGGWRPCTG--RVPASAANFLPGLPPVFVNGYLYW 250
>01_06_0595 -
30485460-30486097,30486721-30487179,30487339-30487558,
30488229-30489980
Length = 1022
Score = 25.4 bits (53), Expect = 6.4
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 72 KSKCVSASMYTLAKPESRSVMPAGSFTACEHGI 170
K+ ++A++ LA P+ + V+P+ S T+ HG+
Sbjct: 686 KTTWLTAALLQLA-PDKQYVLPSSSSTSLNHGV 717
>01_01_1044 + 8231933-8231941,8232091-8232166,8232423-8232871
Length = 177
Score = 25.4 bits (53), Expect = 6.4
Identities = 10/35 (28%), Positives = 21/35 (60%)
Frame = +3
Query: 3 LNRARCTTTDYNLILHLSIEKKLKSKCVSASMYTL 107
++ +CT T ++ + I +KL+ KC SA + ++
Sbjct: 35 IDAEKCTLTVVGIVDPVRIVRKLRKKCFSACIVSV 69
>10_08_0634 - 19452980-19453206,19453310-19453385
Length = 100
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -3
Query: 215 PPRMVIVCGHLAIRLDAVLTGSKAPSRHYRSGLRLGQRV 99
PP ++IV A + A TG++A Y SG+ G+ +
Sbjct: 16 PPCLLIVLVAAAAMVAAAATGARAAWVDYPSGVPCGETI 54
>06_03_1314 +
29266320-29266346,29266463-29266556,29266663-29266712,
29266798-29266847,29266945-29267053,29267135-29267195,
29267291-29267343,29267629-29267721,29268091-29268166,
29268401-29268508,29268596-29268840
Length = 321
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 93 SMYTLAKPESRSVMPAGSFTACEHGIQPDGQMPTDNDH 206
S T AKP+S +F CE+ P+G D H
Sbjct: 189 SQVTFAKPKSSRNSSIEAFAVCENYSPPEGFKEKDLYH 226
>05_01_0191 - 1380872-1382029
Length = 385
Score = 25.0 bits (52), Expect = 8.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Frame = -2
Query: 198 CLWASGHQAGCRAHRQ*SSQQALPI 124
C WA+G +G R H ++ A P+
Sbjct: 356 CFWANGGSSGRRRHAPAAAAAATPV 380
>04_03_0994 - 21514495-21515610
Length = 371
Score = 25.0 bits (52), Expect = 8.5
Identities = 13/39 (33%), Positives = 23/39 (58%)
Frame = -3
Query: 236 VLKGYSSPPRMVIVCGHLAIRLDAVLTGSKAPSRHYRSG 120
++ G S ++ + G+ +I+ DAV G+ SRH+R G
Sbjct: 19 IVGGTESGQHLLEINGYSSIK-DAVSIGNCVQSRHFRVG 56
>01_05_0793 +
25278846-25279504,25279598-25279702,25280949-25281071,
25281167-25281337,25281440-25281569,25281797-25282039,
25282084-25282202,25282269-25282331,25282423-25282486
Length = 558
Score = 25.0 bits (52), Expect = 8.5
Identities = 14/41 (34%), Positives = 19/41 (46%)
Frame = -2
Query: 243 SNSVERIFVSTPDGHCLWASGHQAGCRAHRQ*SSQQALPIW 121
+N VER ST D HQ G R+ R+ + L +W
Sbjct: 504 ANKVERTGSSTSDSLGYDVIDHQCGYRSDREMIGRYMLVLW 544
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,452,829
Number of Sequences: 37544
Number of extensions: 140947
Number of successful extensions: 488
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 475
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 488
length of database: 14,793,348
effective HSP length: 59
effective length of database: 12,578,252
effective search space used: 264143292
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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