BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0494
(244 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M14645-1|AAA28987.1| 450|Drosophila melanogaster protein ( D.me... 60 3e-10
M14644-1|AAA28986.1| 449|Drosophila melanogaster protein ( D.me... 60 3e-10
M14643-1|AAA28985.1| 450|Drosophila melanogaster protein ( D.me... 60 3e-10
BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p pro... 60 3e-10
BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p pro... 60 3e-10
BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p pro... 60 3e-10
AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p pro... 60 3e-10
AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p pro... 60 3e-10
AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA... 60 3e-10
AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,... 60 3e-10
AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,... 60 3e-10
AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA ... 60 3e-10
AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p pro... 48 1e-06
AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA... 48 1e-06
M14646-1|AAA28988.1| 462|Drosophila melanogaster protein ( D.me... 46 5e-06
BT011034-1|AAR30194.1| 240|Drosophila melanogaster RE44641p pro... 46 5e-06
AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA... 46 5e-06
M20420-1|AAA28991.1| 446|Drosophila melanogaster protein ( D.me... 30 0.37
AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p pro... 30 0.37
AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p pro... 30 0.37
AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA... 30 0.37
AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA ... 30 0.37
M20419-1|AAA28989.1| 447|Drosophila melanogaster protein ( D.me... 30 0.49
BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p pro... 30 0.49
AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB... 30 0.49
M22335-1|AAA28993.1| 454|Drosophila melanogaster protein ( D.me... 29 0.86
AE014296-3597|AAS65093.1| 299|Drosophila melanogaster CG33292-P... 29 0.86
BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p pro... 27 2.6
AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA... 27 2.6
AY069715-1|AAL39860.1| 786|Drosophila melanogaster LP01394p pro... 27 4.6
AL109630-3|CAB65872.1| 975|Drosophila melanogaster EG:BACR7A4.1... 27 4.6
AE014298-123|ABC67162.1| 786|Drosophila melanogaster CG3711-PB,... 27 4.6
AE014298-122|AAF45563.1| 975|Drosophila melanogaster CG3711-PA,... 27 4.6
>M14645-1|AAA28987.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-3), complete
cds. ).
Length = 450
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 0.070
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>M14644-1|AAA28986.1| 449|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-2), complete
cds. ).
Length = 449
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI VH+GQAGVQIGNACWELYCL
Sbjct: 1 MRECISVHIGQAGVQIGNACWELYCL 26
Score = 30.7 bits (66), Expect = 0.28
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDG MP+D
Sbjct: 27 EHGIQPDGHMPSD 39
>M14643-1|AAA28985.1| 450|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-1), complete
cds. ).
Length = 450
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 0.070
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>BT016118-1|AAV37003.1| 450|Drosophila melanogaster LD07757p
protein.
Length = 450
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 0.070
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>BT012506-1|AAS93777.1| 450|Drosophila melanogaster AT25469p
protein.
Length = 450
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 0.070
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>BT003630-1|AAO39634.1| 450|Drosophila melanogaster AT26363p
protein.
Length = 450
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 0.070
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>AY113631-1|AAM29636.1| 449|Drosophila melanogaster RH71862p
protein.
Length = 449
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI VH+GQAGVQIGNACWELYCL
Sbjct: 1 MRECISVHIGQAGVQIGNACWELYCL 26
Score = 30.7 bits (66), Expect = 0.28
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDG MP+D
Sbjct: 27 EHGIQPDGHMPSD 39
>AY084208-1|AAL89946.1| 450|Drosophila melanogaster SD07763p
protein.
Length = 450
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 0.070
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>AE014297-1015|AAF54433.1| 449|Drosophila melanogaster CG9476-PA
protein.
Length = 449
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI VH+GQAGVQIGNACWELYCL
Sbjct: 1 MRECISVHIGQAGVQIGNACWELYCL 26
Score = 30.7 bits (66), Expect = 0.28
Identities = 11/13 (84%), Positives = 12/13 (92%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDG MP+D
Sbjct: 27 EHGIQPDGHMPSD 39
>AE014297-627|AAN13341.1| 450|Drosophila melanogaster CG2512-PB,
isoform B protein.
Length = 450
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 0.070
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>AE014297-626|AAF54007.1| 450|Drosophila melanogaster CG2512-PA,
isoform A protein.
Length = 450
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 0.070
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>AE014297-554|AAF54067.1| 450|Drosophila melanogaster CG1913-PA
protein.
Length = 450
Score = 60.5 bits (140), Expect = 3e-10
Identities = 24/26 (92%), Positives = 25/26 (96%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRECI +HVGQAGVQIGNACWELYCL
Sbjct: 1 MRECISIHVGQAGVQIGNACWELYCL 26
Score = 32.7 bits (71), Expect = 0.070
Identities = 12/13 (92%), Positives = 13/13 (100%)
Frame = +3
Query: 159 EHGIQPDGQMPTD 197
EHGIQPDGQMP+D
Sbjct: 27 EHGIQPDGQMPSD 39
>AY089253-1|AAL89991.1| 455|Drosophila melanogaster AT04270p
protein.
Length = 455
Score = 48.4 bits (110), Expect = 1e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2
Query: 86 ECIYVHVGQAGVQIGNACWELYCL 157
E I +H+GQAGVQI NACWEL+CL
Sbjct: 6 EIIQIHIGQAGVQIANACWELFCL 29
>AE014297-2432|AAF55488.1| 455|Drosophila melanogaster CG7794-PA
protein.
Length = 455
Score = 48.4 bits (110), Expect = 1e-06
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = +2
Query: 86 ECIYVHVGQAGVQIGNACWELYCL 157
E I +H+GQAGVQI NACWEL+CL
Sbjct: 6 EIIQIHIGQAGVQIANACWELFCL 29
>M14646-1|AAA28988.1| 462|Drosophila melanogaster protein (
D.melanogaster alpha-tubulin gene (alpha-4), complete
cds. ).
Length = 462
Score = 46.4 bits (105), Expect = 5e-06
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE + + +GQ G+QIGNACWELY L
Sbjct: 1 MREVVSIQIGQCGIQIGNACWELYLL 26
>BT011034-1|AAR30194.1| 240|Drosophila melanogaster RE44641p
protein.
Length = 240
Score = 46.4 bits (105), Expect = 5e-06
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE + + +GQ G+QIGNACWELY L
Sbjct: 1 MREVVSIQIGQCGIQIGNACWELYLL 26
>AE014296-1707|AAF50226.2| 462|Drosophila melanogaster CG8308-PA
protein.
Length = 462
Score = 46.4 bits (105), Expect = 5e-06
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWELYCL 157
MRE + + +GQ G+QIGNACWELY L
Sbjct: 1 MREVVSIQIGQCGIQIGNACWELYLL 26
>M20420-1|AAA28991.1| 446|Drosophila melanogaster protein (
D.melanogaster beta-2 tubulin mRNA, complete cds. ).
Length = 446
Score = 30.3 bits (65), Expect = 0.37
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE +++ GQ G QIG WE+
Sbjct: 1 MREIVHIQAGQCGNQIGGKFWEV 23
>AY118725-1|AAM50585.1| 446|Drosophila melanogaster GH02051p
protein.
Length = 446
Score = 30.3 bits (65), Expect = 0.37
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE +++ GQ G QIG WE+
Sbjct: 1 MREIVHIQAGQCGNQIGGKFWEV 23
>AY118611-1|AAM49980.1| 457|Drosophila melanogaster LP10436p
protein.
Length = 457
Score = 30.3 bits (65), Expect = 0.37
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE +++ GQ G QIG+ WE+
Sbjct: 1 MREIVHLQAGQCGNQIGSKFWEI 23
>AE014297-4213|AAF56770.2| 522|Drosophila melanogaster CG4869-PA
protein.
Length = 522
Score = 30.3 bits (65), Expect = 0.37
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE +++ GQ G QIG+ WE+
Sbjct: 1 MREIVHLQAGQCGNQIGSKFWEI 23
>AE014297-930|AAF54373.1| 446|Drosophila melanogaster CG9359-PA
protein.
Length = 446
Score = 30.3 bits (65), Expect = 0.37
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE +++ GQ G QIG WE+
Sbjct: 1 MREIVHIQAGQCGNQIGGKFWEV 23
>M20419-1|AAA28989.1| 447|Drosophila melanogaster protein (
D.melanogaster beta-1 tubulin mRNA, complete cds. ).
Length = 447
Score = 29.9 bits (64), Expect = 0.49
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE +++ GQ G QIG WE+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEI 23
>BT003242-1|AAO24999.1| 447|Drosophila melanogaster LD43681p
protein.
Length = 447
Score = 29.9 bits (64), Expect = 0.49
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE +++ GQ G QIG WE+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEI 23
>AE013599-2891|AAF57555.1| 447|Drosophila melanogaster CG9277-PB,
isoform B protein.
Length = 447
Score = 29.9 bits (64), Expect = 0.49
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE +++ GQ G QIG WE+
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEI 23
>M22335-1|AAA28993.1| 454|Drosophila melanogaster protein (
D.melanogaster beta-3 tubulin gene, exons 2, 3 and 4. ).
Length = 454
Score = 29.1 bits (62), Expect = 0.86
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE +++ GQ G QIG WE+
Sbjct: 1 MREIVHLQAGQCGNQIGAKFWEI 23
>AE014296-3597|AAS65093.1| 299|Drosophila melanogaster CG33292-PA
protein.
Length = 299
Score = 29.1 bits (62), Expect = 0.86
Identities = 20/61 (32%), Positives = 29/61 (47%), Gaps = 2/61 (3%)
Frame = +3
Query: 36 NLILHLSIEKKLKSKCVSASMYTLAKPESRSVMPAGSFTACEH--GIQPDGQMPTDNDHP 209
N ++++ IE + SA + T+AKP V P S C+ G DG D+D P
Sbjct: 182 NGVINIRIEGNYRR--ASALVETVAKPTLAVVAPTKSECDCDAALGDNDDGNADDDSDDP 239
Query: 210 G 212
G
Sbjct: 240 G 240
>BT015991-1|AAV36876.1| 454|Drosophila melanogaster RE53159p
protein.
Length = 454
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE + + GQ G QIG WE+
Sbjct: 1 MREIVNLQAGQCGNQIGAKFWEI 23
>AE013599-3851|AAF47193.2| 454|Drosophila melanogaster CG3401-PA
protein.
Length = 454
Score = 27.5 bits (58), Expect = 2.6
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 80 MRECIYVHVGQAGVQIGNACWEL 148
MRE + + GQ G QIG WE+
Sbjct: 1 MREIVNLQAGQCGNQIGAKFWEI 23
>AY069715-1|AAL39860.1| 786|Drosophila melanogaster LP01394p
protein.
Length = 786
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 83 RECIYVHVGQAGVQIGNACWELY 151
R+ +YV GQ+G+QI N+ +E +
Sbjct: 419 RDAMYVFSGQSGLQITNSLFEFH 441
>AL109630-3|CAB65872.1| 975|Drosophila melanogaster EG:BACR7A4.19
protein.
Length = 975
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 83 RECIYVHVGQAGVQIGNACWELY 151
R+ +YV GQ+G+QI N+ +E +
Sbjct: 419 RDAMYVFSGQSGLQITNSLFEFH 441
>AE014298-123|ABC67162.1| 786|Drosophila melanogaster CG3711-PB,
isoform B protein.
Length = 786
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 83 RECIYVHVGQAGVQIGNACWELY 151
R+ +YV GQ+G+QI N+ +E +
Sbjct: 419 RDAMYVFSGQSGLQITNSLFEFH 441
>AE014298-122|AAF45563.1| 975|Drosophila melanogaster CG3711-PA,
isoform A protein.
Length = 975
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +2
Query: 83 RECIYVHVGQAGVQIGNACWELY 151
R+ +YV GQ+G+QI N+ +E +
Sbjct: 419 RDAMYVFSGQSGLQITNSLFEFH 441
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,152,896
Number of Sequences: 53049
Number of extensions: 231786
Number of successful extensions: 847
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 813
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 24,988,368
effective HSP length: 60
effective length of database: 21,805,428
effective search space used: 436108560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -