Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0493
         (573 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P53703 Cluster: Probable cytochrome c-type heme lyase; ...    50   3e-05
UniRef50_P53701 Cluster: Cytochrome c-type heme lyase; n=37; Euk...    47   4e-04
UniRef50_Q7ZTL8 Cluster: Hccs-prov protein; n=2; Xenopus|Rep: Hc...    44   0.003
UniRef50_Q8I5H1 Cluster: Cytochrome c heme lyase, putative; n=5;...    36   0.51 
UniRef50_Q2NDZ9 Cluster: CobD; n=1; Methanosphaera stadtmanae DS...    36   0.89 
UniRef50_A2FKJ6 Cluster: Putative uncharacterized protein; n=1; ...    33   3.6  
UniRef50_Q4Y8S7 Cluster: Putative uncharacterized protein; n=2; ...    33   6.3  

>UniRef50_P53703 Cluster: Probable cytochrome c-type heme lyase;
           n=2; Caenorhabditis|Rep: Probable cytochrome c-type heme
           lyase - Caenorhabditis elegans
          Length = 280

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 18/33 (54%), Positives = 26/33 (78%)
 Frame = -2

Query: 557 FAMLDVRPAINSVENVWDRMKVMYMRYRYELIG 459
           F +LDVRPA+N + N+WDRM V Y R+++E +G
Sbjct: 231 FTILDVRPAVNDIGNIWDRMVVAYWRFKFETLG 263


>UniRef50_P53701 Cluster: Cytochrome c-type heme lyase; n=37;
           Eukaryota|Rep: Cytochrome c-type heme lyase - Homo
           sapiens (Human)
          Length = 268

 Score = 46.8 bits (106), Expect = 4e-04
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -2

Query: 572 NTKYQFAMLDVRPAINSVENVWDRMKVMYMRY 477
           N  YQF +LDVRPA++S+  VWDRMKV + R+
Sbjct: 235 NKDYQFTILDVRPALDSLSAVWDRMKVAWWRW 266


>UniRef50_Q7ZTL8 Cluster: Hccs-prov protein; n=2; Xenopus|Rep:
           Hccs-prov protein - Xenopus laevis (African clawed frog)
          Length = 301

 Score = 44.0 bits (99), Expect = 0.003
 Identities = 17/32 (53%), Positives = 25/32 (78%)
 Frame = -2

Query: 572 NTKYQFAMLDVRPAINSVENVWDRMKVMYMRY 477
           +  YQF++LDVRPA +S+  +WDRMKV + R+
Sbjct: 268 DNNYQFSILDVRPAFDSMGAIWDRMKVAWWRW 299


>UniRef50_Q8I5H1 Cluster: Cytochrome c heme lyase, putative; n=5;
           Plasmodium|Rep: Cytochrome c heme lyase, putative -
           Plasmodium falciparum (isolate 3D7)
          Length = 250

 Score = 36.3 bits (80), Expect = 0.51
 Identities = 12/29 (41%), Positives = 21/29 (72%)
 Frame = -2

Query: 548 LDVRPAINSVENVWDRMKVMYMRYRYELI 462
           +DVRPA+NS  NVWDR++  +  + ++ +
Sbjct: 215 IDVRPAMNSFSNVWDRLRYPFYEFYFKYV 243


>UniRef50_Q2NDZ9 Cluster: CobD; n=1; Methanosphaera stadtmanae DSM
           3091|Rep: CobD - Methanosphaera stadtmanae (strain DSM
           3091)
          Length = 319

 Score = 35.5 bits (78), Expect = 0.89
 Identities = 17/41 (41%), Positives = 24/41 (58%)
 Frame = +1

Query: 436 LLNFVCLLPINSYLYLMYITFILSQTFSTEFIAGLTSNIAN 558
           LL  + L+ IN +LYL++   ILS TFS  F+     +I N
Sbjct: 70  LLFLIILMLINQWLYLIFAALILSTTFSINFLIKSVQDIQN 110


>UniRef50_A2FKJ6 Cluster: Putative uncharacterized protein; n=1;
           Trichomonas vaginalis G3|Rep: Putative uncharacterized
           protein - Trichomonas vaginalis G3
          Length = 458

 Score = 33.5 bits (73), Expect = 3.6
 Identities = 23/87 (26%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
 Frame = +2

Query: 281 HKEFLQ*QTMSTEELHKIILTQQNILTRYLRI*LSTLVCTLSKD---YIVNKLFSYLISF 451
           H ++L  +T S   +  +IL+ Q I+ ++    LS  +  +S +   Y++N+ + YLI+ 
Sbjct: 315 HHQYLYQKTFSFSHISDMILSVQTIINKFCPS-LSNSIAEISLENFEYVINQFYCYLINV 373

Query: 452 VCCRSIHIYTSCTLLSFCPKRFQRSLL 532
                I +  S  L +  P  F R L+
Sbjct: 374 RPNEDIILLVSSILANPQPGIFMRCLI 400


>UniRef50_Q4Y8S7 Cluster: Putative uncharacterized protein; n=2;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 261

 Score = 32.7 bits (71), Expect = 6.3
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = -2

Query: 281 DHVSLKVYISVIGLFTHNPPIISSDK*CNVK*KMIFSSLLIYKSH*LIKYFIN 123
           D V +K Y  +I  F     +  + K CN + K     ++ Y S+ L+KYF N
Sbjct: 2   DEVRIKKYTDLISSFEKKSELELNSKKCNTEDKTNLLEMIEYFSNTLVKYFYN 54


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 507,688,835
Number of Sequences: 1657284
Number of extensions: 9383529
Number of successful extensions: 17236
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17236
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)