Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0493
         (573 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    24   0.80 
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       22   4.3  
DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase rever...    21   5.6  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    21   5.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    21   5.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   7.5  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.9  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 24.2 bits (50), Expect = 0.80
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
 Frame = +1

Query: 448 VCLLPINSYLYLMYITF--ILSQTFSTEF 528
           VCL+P+N Y + + + +  I+  TF+  F
Sbjct: 22  VCLVPLNPYQFFLAVQYPRIVVSTFNIVF 50


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = +3

Query: 471 ISIPHVHYFHSVPNVFNGVYCWPDIQHCKL 560
           +++P V +       F G YC  +I  CK+
Sbjct: 45  VNLPGVGHRCQCQPGFTGKYCHENINDCKV 74


>DQ372925-1|ABD17350.1|  596|Tribolium castaneum telomerase reverse
           transcriptase protein.
          Length = 596

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 9/25 (36%), Positives = 11/25 (44%)
 Frame = +3

Query: 456 VADQFISIPHVHYFHSVPNVFNGVY 530
           V D F   PH H  +    +  GVY
Sbjct: 342 VDDYFFCSPHPHKVYDFELLIKGVY 366


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 317 EELHKIILTQQNILTRYLRI*LSTLVCTLS 406
           +  H I L    ILT  L I ++  VC L+
Sbjct: 274 QNFHDIFLPLLCILTNTLEILITVTVCELT 303


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 5.6
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = +2

Query: 317 EELHKIILTQQNILTRYLRI*LSTLVCTLS 406
           +  H I L    ILT  L I ++  VC L+
Sbjct: 99  QNFHDIFLPLLCILTNTLEILITVTVCELT 128


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +1

Query: 439 LNFVCLLPINSYLYLMYITFIL 504
           L F C+L I   +Y  Y  FIL
Sbjct: 226 LLFYCVLIILLCIYYFYYAFIL 247



 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -3

Query: 352 ILLCKYYFVEFF 317
           ILLC YYF   F
Sbjct: 294 ILLCIYYFCRAF 305


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 427 TV*LLNFVCLLPINSYLYLMYI 492
           TV L  F+CLLP  +  + + +
Sbjct: 296 TVVLAFFICLLPFRALTFWIIV 317


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,615
Number of Sequences: 336
Number of extensions: 2960
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14203976
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)