Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0493
         (573 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_04_0191 + 23468410-23468455,23468560-23468699,23469119-234692...    27   8.0  
02_04_0402 + 22618998-22619043,22619206-22619345,22620067-226201...    27   8.0  

>04_04_0191 +
           23468410-23468455,23468560-23468699,23469119-23469201,
           23469346-23469550,23469632-23469735,23470290-23470449
          Length = 245

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 431 FSYLISFVCCRSIHIYTSCTLLSFCPKRFQ 520
           ++YL  ++      +  SC LL F  KRFQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQ 32


>02_04_0402 +
           22618998-22619043,22619206-22619345,22620067-22620149,
           22620234-22620438,22620524-22620592,22621099-22621188
          Length = 210

 Score = 27.5 bits (58), Expect = 8.0
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 431 FSYLISFVCCRSIHIYTSCTLLSFCPKRFQ 520
           ++YL  ++      +  SC LL F  KRFQ
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQ 32


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,668,477
Number of Sequences: 37544
Number of extensions: 222852
Number of successful extensions: 421
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 415
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 421
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)