Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0493
         (573 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U36787-1|AAB19007.1|  268|Homo sapiens holocytochrome c-type syn...    47   5e-05
BC095455-1|AAH95455.1|  268|Homo sapiens holocytochrome c syntha...    47   5e-05
BC001691-1|AAH01691.1|  268|Homo sapiens HCCS protein protein.         47   5e-05
AF053015-1|AAC35274.1|  268|Homo sapiens putative holocytochrome...    47   5e-05

>U36787-1|AAB19007.1|  268|Homo sapiens holocytochrome c-type
           synthetase protein.
          Length = 268

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -2

Query: 572 NTKYQFAMLDVRPAINSVENVWDRMKVMYMRY 477
           N  YQF +LDVRPA++S+  VWDRMKV + R+
Sbjct: 235 NKDYQFTILDVRPALDSLSAVWDRMKVAWWRW 266


>BC095455-1|AAH95455.1|  268|Homo sapiens holocytochrome c synthase
           (cytochrome c heme-lyase) protein.
          Length = 268

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -2

Query: 572 NTKYQFAMLDVRPAINSVENVWDRMKVMYMRY 477
           N  YQF +LDVRPA++S+  VWDRMKV + R+
Sbjct: 235 NKDYQFTILDVRPALDSLSAVWDRMKVAWWRW 266


>BC001691-1|AAH01691.1|  268|Homo sapiens HCCS protein protein.
          Length = 268

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -2

Query: 572 NTKYQFAMLDVRPAINSVENVWDRMKVMYMRY 477
           N  YQF +LDVRPA++S+  VWDRMKV + R+
Sbjct: 235 NKDYQFTILDVRPALDSLSAVWDRMKVAWWRW 266


>AF053015-1|AAC35274.1|  268|Homo sapiens putative holocytochrome
           c-type synthetase protein.
          Length = 268

 Score = 46.8 bits (106), Expect = 5e-05
 Identities = 19/32 (59%), Positives = 25/32 (78%)
 Frame = -2

Query: 572 NTKYQFAMLDVRPAINSVENVWDRMKVMYMRY 477
           N  YQF +LDVRPA++S+  VWDRMKV + R+
Sbjct: 235 NKDYQFTILDVRPALDSLSAVWDRMKVAWWRW 266


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 73,776,583
Number of Sequences: 237096
Number of extensions: 1427492
Number of successful extensions: 1880
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1810
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1880
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5872755824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)