Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0493
         (573 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY118889-1|AAM50749.1|  281|Drosophila melanogaster HL08191p pro...    61   1e-09
AE014297-3084|AAF55946.1|  281|Drosophila melanogaster CG6022-PA...    61   1e-09
AE014134-1179|AAF52446.2|  746|Drosophila melanogaster CG31632-P...    29   5.9  

>AY118889-1|AAM50749.1|  281|Drosophila melanogaster HL08191p
           protein.
          Length = 281

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 24/33 (72%), Positives = 32/33 (96%)
 Frame = -2

Query: 563 YQFAMLDVRPAINSVENVWDRMKVMYMRYRYEL 465
           Y+FA+LDVRPA++SV+NVWDRM+V YMR++YEL
Sbjct: 232 YRFALLDVRPAMDSVDNVWDRMRVAYMRWKYEL 264


>AE014297-3084|AAF55946.1|  281|Drosophila melanogaster CG6022-PA
           protein.
          Length = 281

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 24/33 (72%), Positives = 32/33 (96%)
 Frame = -2

Query: 563 YQFAMLDVRPAINSVENVWDRMKVMYMRYRYEL 465
           Y+FA+LDVRPA++SV+NVWDRM+V YMR++YEL
Sbjct: 232 YRFALLDVRPAMDSVDNVWDRMRVAYMRWKYEL 264


>AE014134-1179|AAF52446.2|  746|Drosophila melanogaster CG31632-PA
           protein.
          Length = 746

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 15/49 (30%), Positives = 24/49 (48%)
 Frame = +2

Query: 416 IVNKLFSYLISFVCCRSIHIYTSCTLLSFCPKRFQRSLLLA*HPTLQTD 562
           + NK F + +S    R++H          C KRF+RS  L+ H  + +D
Sbjct: 540 LCNKTFGHEVSLSQHRAVHNVEKVFECKQCGKRFKRSSTLSTHLLIHSD 588


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,774,111
Number of Sequences: 53049
Number of extensions: 424275
Number of successful extensions: 697
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 686
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 697
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)