Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0492
         (415 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    24   0.51 
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    24   0.51 
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    24   0.51 
AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone recepto...    21   6.3  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    20   8.3  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    20   8.3  
AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2 ...    20   8.3  

>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.51
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 187 LMLKGLARLHYPDYGGLNKHLSVSSMCLCVASWSTLSSVLNGVFIFHAELF 339
           ++L     L +P    L   +S+  + L V    TLS++L G  ++H   +
Sbjct: 112 ILLNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAY 162


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.51
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 187 LMLKGLARLHYPDYGGLNKHLSVSSMCLCVASWSTLSSVLNGVFIFHAELF 339
           ++L     L +P    L   +S+  + L V    TLS++L G  ++H   +
Sbjct: 112 ILLNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAY 162


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 24.2 bits (50), Expect = 0.51
 Identities = 13/51 (25%), Positives = 24/51 (47%)
 Frame = +1

Query: 187 LMLKGLARLHYPDYGGLNKHLSVSSMCLCVASWSTLSSVLNGVFIFHAELF 339
           ++L     L +P    L   +S+  + L V    TLS++L G  ++H   +
Sbjct: 112 ILLNKSKNLQFPLLSTLIIIISLGCLILAVVFLLTLSALLEGFTLYHTTAY 162


>AM295015-1|CAL25730.1|  549|Tribolium castaneum ecdysone receptor
           (isoform A) protein.
          Length = 549

 Score = 20.6 bits (41), Expect = 6.3
 Identities = 12/42 (28%), Positives = 19/42 (45%)
 Frame = -3

Query: 155 RHGSSPEFLSSRNASIC*LRRNI*SVPRERRTLTDTWRDRAT 30
           R   SP  L+  +A  C  ++     PR++  L     DRA+
Sbjct: 155 REDLSPSSLNGYSADSCDSKKKKGPTPRQQEELCLVCGDRAS 196


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 HLSVSSMCLCVASWSTLSSVLNGVFIFHAEL 336
           +L++ +  LCV SW+    ++   +   A++
Sbjct: 173 NLTLITYSLCVISWAVGIGIMLAQYYLQADM 203


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/31 (22%), Positives = 17/31 (54%)
 Frame = +1

Query: 244 HLSVSSMCLCVASWSTLSSVLNGVFIFHAEL 336
           +L++ +  LCV SW+    ++   +   A++
Sbjct: 173 NLTLITYSLCVISWAVGIGIMLAQYYLQADM 203


>AJ223614-1|CAA11490.1|  301|Tribolium castaneum orthodenticle-2
           protein protein.
          Length = 301

 Score = 20.2 bits (40), Expect = 8.3
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = -1

Query: 172 SPQPVVVTVQAQSSCHQEMHRYAD 101
           S QPV+ T  + ++C+     Y++
Sbjct: 238 SSQPVLSTTNSTTNCYNNYPYYSN 261


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,110
Number of Sequences: 336
Number of extensions: 1577
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  9068614
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)