Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0492
         (415 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.              25   0.45 
DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.              25   0.45 
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              23   1.0  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   1.4  

>DQ435332-1|ABD92647.1|  135|Apis mellifera OBP15 protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = +1

Query: 238 NKHLSVSSMCLCVASWSTLSSVLN 309
           N HL ++ +  C+  + T++ +LN
Sbjct: 111 NVHLKITKIFQCITKFKTINDILN 134


>DQ435331-1|ABD92646.1|  135|Apis mellifera OBP14 protein.
          Length = 135

 Score = 24.6 bits (51), Expect = 0.45
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 238 NKHLSVSSMCLCVASWSTLSSV 303
           N HL  S +  CV+ + T+ SV
Sbjct: 111 NPHLKASKLVQCVSKYKTMKSV 132


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 23.4 bits (48), Expect = 1.0
 Identities = 7/24 (29%), Positives = 14/24 (58%)
 Frame = +1

Query: 238 NKHLSVSSMCLCVASWSTLSSVLN 309
           N H+ +S +  C   + T++ +LN
Sbjct: 111 NVHIKISKIFQCFMKYKTITDILN 134


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 244 HLSVSSMCLCVASWSTLSSVLN 309
           HL  S +  C A + TL  ++N
Sbjct: 113 HLKSSKLIKCFAKYKTLKEIMN 134


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,659
Number of Sequences: 438
Number of extensions: 1771
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10503195
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)