Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0491
         (431 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q48919 Cluster: Alanine and proline-rich secreted prote...    35   0.84 
UniRef50_UPI0001552B7E Cluster: PREDICTED: similar to ankyrin re...    33   1.9  
UniRef50_Q9JIK7 Cluster: TCE4; n=5; Mammalia|Rep: TCE4 - Mus mus...    33   2.6  
UniRef50_A7CX35 Cluster: Acetyl xylan esterase; n=1; Opitutaceae...    33   2.6  
UniRef50_A3IFL7 Cluster: SpoVID-dependent spore coat assembly fa...    33   2.6  
UniRef50_Q6PG95 Cluster: Protein cramped-like; n=17; Amniota|Rep...    33   2.6  
UniRef50_Q82EC4 Cluster: Putative uncharacterized protein; n=2; ...    33   3.4  
UniRef50_Q7RYK5 Cluster: Predicted protein; n=1; Neurospora cras...    33   3.4  
UniRef50_Q46ZU0 Cluster: Outer membrane autotransporter barrel; ...    32   5.9  
UniRef50_Q1RQQ9 Cluster: Putative chain length factor protein; n...    31   7.8  
UniRef50_A2ECZ0 Cluster: Putative uncharacterized protein; n=1; ...    31   7.8  
UniRef50_Q6C1S8 Cluster: Similarity; n=1; Yarrowia lipolytica|Re...    31   7.8  

>UniRef50_Q48919 Cluster: Alanine and proline-rich secreted protein
           apa precursor; n=18; Mycobacterium|Rep: Alanine and
           proline-rich secreted protein apa precursor -
           Mycobacterium avium
          Length = 381

 Score = 34.7 bits (76), Expect = 0.84
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +2

Query: 143 PGAGAPPHELPHPAPNGAPP 202
           P AGAPP+  P  APNGAPP
Sbjct: 98  PPAGAPPNGAPPAAPNGAPP 117


>UniRef50_UPI0001552B7E Cluster: PREDICTED: similar to ankyrin
           repeat domain 34; n=2; Theria|Rep: PREDICTED: similar to
           ankyrin repeat domain 34 - Mus musculus
          Length = 400

 Score = 33.5 bits (73), Expect = 1.9
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 89  G*IVPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAP 199
           G + P+ V  +P + D RP  G     LP P P+GAP
Sbjct: 327 GFLPPLNVSPHPPIPDIRPQPGGRAPSLPAPPPSGAP 363


>UniRef50_Q9JIK7 Cluster: TCE4; n=5; Mammalia|Rep: TCE4 - Mus
           musculus (Mouse)
          Length = 153

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 146 GAGAPPHELPHPA-PNGAPPDNHH 214
           GA APP  LP P+ P G+P D HH
Sbjct: 55  GAPAPPRGLPTPSPPQGSPQDQHH 78


>UniRef50_A7CX35 Cluster: Acetyl xylan esterase; n=1; Opitutaceae
           bacterium TAV2|Rep: Acetyl xylan esterase - Opitutaceae
           bacterium TAV2
          Length = 363

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 15/28 (53%), Positives = 17/28 (60%)
 Frame = -1

Query: 152 PLPACSPPLADMLVLRPEQFIPLPPSVF 69
           P PA SPPL    V RPE+ I  PP +F
Sbjct: 7   PAPAGSPPLLRGFVWRPEETITAPPGLF 34


>UniRef50_A3IFL7 Cluster: SpoVID-dependent spore coat assembly
           factor SafA; n=1; Bacillus sp. B14905|Rep:
           SpoVID-dependent spore coat assembly factor SafA -
           Bacillus sp. B14905
          Length = 349

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 16/37 (43%), Positives = 19/37 (51%)
 Frame = +2

Query: 101 PVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPPDNH 211
           PV++Q  P      P A   PH +PHP P  APP  H
Sbjct: 162 PVQIQPAPPPPP-PPVAKPMPHPMPHPMPQPAPPPMH 197


>UniRef50_Q6PG95 Cluster: Protein cramped-like; n=17; Amniota|Rep:
           Protein cramped-like - Mus musculus (Mouse)
          Length = 1285

 Score = 33.1 bits (72), Expect = 2.6
 Identities = 14/24 (58%), Positives = 16/24 (66%), Gaps = 1/24 (4%)
 Frame = +2

Query: 146 GAGAPPHELPHPA-PNGAPPDNHH 214
           GA APP  LP P+ P G+P D HH
Sbjct: 55  GAPAPPRGLPTPSPPQGSPQDQHH 78


>UniRef50_Q82EC4 Cluster: Putative uncharacterized protein; n=2;
           Streptomyces|Rep: Putative uncharacterized protein -
           Streptomyces avermitilis
          Length = 240

 Score = 32.7 bits (71), Expect = 3.4
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 191 RSEQGAGAREAERPLPACSPPLADMLVLRPEQFIPLPPSVF 69
           R+ +G   + AE+P PA +P        RP++ IP P  VF
Sbjct: 169 RAAEGPDGKPAEKPAPAPTPKPTPQKTPRPDRPIPTPGEVF 209


>UniRef50_Q7RYK5 Cluster: Predicted protein; n=1; Neurospora
           crassa|Rep: Predicted protein - Neurospora crassa
          Length = 1568

 Score = 32.7 bits (71), Expect = 3.4
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = +2

Query: 143 PGAGAPPHELPHPAPNGAPPDNHH 214
           P A   P++ P P PN APP  HH
Sbjct: 452 PAAQQGPNQTPRPPPNSAPPGFHH 475


>UniRef50_Q46ZU0 Cluster: Outer membrane autotransporter barrel;
           n=1; Ralstonia eutropha JMP134|Rep: Outer membrane
           autotransporter barrel - Ralstonia eutropha (strain
           JMP134) (Alcaligenes eutrophus)
          Length = 947

 Score = 31.9 bits (69), Expect = 5.9
 Identities = 14/24 (58%), Positives = 16/24 (66%)
 Frame = +2

Query: 131 VDCRPGAGAPPHELPHPAPNGAPP 202
           +DC PGAGAP    P P P+ APP
Sbjct: 588 LDC-PGAGAPSPPCPAPKPSPAPP 610


>UniRef50_Q1RQQ9 Cluster: Putative chain length factor protein; n=4;
           Streptomyces ambofaciens|Rep: Putative chain length
           factor protein - Streptomyces ambofaciens ATCC 23877
          Length = 422

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 16/45 (35%), Positives = 18/45 (40%)
 Frame = +2

Query: 155 APPHELPHPAPNGAPPDNHHNXXXXXXXXXXXXEGAAGTWELTTS 289
           APP   PHPAP+G PP  H               GA   W+   S
Sbjct: 5   APPARSPHPAPDG-PPHTHQALVTGIGITAPNGLGAPAYWDALLS 48


>UniRef50_A2ECZ0 Cluster: Putative uncharacterized protein; n=1;
            Trichomonas vaginalis G3|Rep: Putative uncharacterized
            protein - Trichomonas vaginalis G3
          Length = 2151

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 17/38 (44%), Positives = 19/38 (50%)
 Frame = +2

Query: 98   VPVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPPDNH 211
            VPVE+Q  PL +  R     PP   P P P G PP  H
Sbjct: 1217 VPVEIQTQPL-IHKRKHPPPPPANQP-PPPRGPPPRKH 1252


>UniRef50_Q6C1S8 Cluster: Similarity; n=1; Yarrowia lipolytica|Rep:
           Similarity - Yarrowia lipolytica (Candida lipolytica)
          Length = 1094

 Score = 31.5 bits (68), Expect = 7.8
 Identities = 12/24 (50%), Positives = 13/24 (54%)
 Frame = +2

Query: 143 PGAGAPPHELPHPAPNGAPPDNHH 214
           P   APPH   HP P+G P   HH
Sbjct: 175 PQQHAPPHGPAHPPPHGQPHQPHH 198


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 338,342,747
Number of Sequences: 1657284
Number of extensions: 5457357
Number of successful extensions: 26762
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 23481
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26583
length of database: 575,637,011
effective HSP length: 93
effective length of database: 421,509,599
effective search space used: 21075479950
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)