BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= ce--0491 (431 letters) Database: tribolium 336 sequences; 122,585 total letters Searching.......................................................done Score E Sequences producing significant alignments: (bits) Value AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain tran... 23 1.6 AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 ... 23 1.6 AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain tran... 21 3.8 AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia or... 21 3.8 U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. 21 5.0 AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. 21 6.6 >AY043292-1|AAK96031.1| 323|Tribolium castaneum homeodomain transcription factor Prothoraxlessprotein. Length = 323 Score = 22.6 bits (46), Expect = 1.6 Identities = 8/17 (47%), Positives = 8/17 (47%) Frame = +2 Query: 152 GAPPHELPHPAPNGAPP 202 G PPH P G PP Sbjct: 59 GIPPHHYGGPPSGGQPP 75 Score = 21.0 bits (42), Expect = 5.0 Identities = 6/13 (46%), Positives = 8/13 (61%) Frame = +2 Query: 143 PGAGAPPHELPHP 181 P G PP +P+P Sbjct: 69 PSGGQPPQGMPYP 81 >AJ223627-1|CAA11500.1| 371|Tribolium castaneum orthodenticle-1 protein protein. Length = 371 Score = 22.6 bits (46), Expect = 1.6 Identities = 10/34 (29%), Positives = 17/34 (50%) Frame = +2 Query: 101 PVEVQAYPLMVDCRPGAGAPPHELPHPAPNGAPP 202 P +V+A P + A P +P P+ + +PP Sbjct: 201 PTKVKASKASPAAAPRSVATPTGIPTPSTSASPP 234 >AY043293-1|AAK96033.1| 523|Tribolium castaneum homeodomain transcription factor Maxillopediaprotein. Length = 523 Score = 21.4 bits (43), Expect = 3.8 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = +3 Query: 291 LSGYQGVHTCYQYY 332 + GYQG H Y +Y Sbjct: 378 VQGYQGEHPNYNHY 391 >AF187069-1|AAF03889.1| 471|Tribolium castaneum proboscipedia ortholog protein. Length = 471 Score = 21.4 bits (43), Expect = 3.8 Identities = 7/14 (50%), Positives = 9/14 (64%) Frame = +3 Query: 291 LSGYQGVHTCYQYY 332 + GYQG H Y +Y Sbjct: 326 VQGYQGEHPNYNHY 339 >U09586-1|AAC47270.1| 425|Tribolium castaneum ORF 1 protein. Length = 425 Score = 21.0 bits (42), Expect = 5.0 Identities = 7/9 (77%), Positives = 8/9 (88%) Frame = +2 Query: 149 AGAPPHELP 175 AGAPP E+P Sbjct: 10 AGAPPQEMP 18 >AY884062-1|AAX84203.1| 712|Tribolium castaneum laccase 2B protein. Length = 712 Score = 20.6 bits (41), Expect = 6.6 Identities = 8/15 (53%), Positives = 11/15 (73%) Frame = -1 Query: 137 SPPLADMLVLRPEQF 93 SPPL+ + L P+QF Sbjct: 538 SPPLSQIHDLSPDQF 552 Database: tribolium Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 122,585 Number of sequences in database: 336 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 81,469 Number of Sequences: 336 Number of extensions: 1505 Number of successful extensions: 7 Number of sequences better than 10.0: 6 Number of HSP's better than 10.0 without gapping: 6 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7 length of database: 122,585 effective HSP length: 52 effective length of database: 105,113 effective search space used: 9565283 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 40 (21.2 bits)
- SilkBase 1999-2023 -