Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0487
         (691 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CA520 Cluster: hypothetical protein TTHERM_0067...    33   6.6  

>UniRef50_UPI00006CA520 Cluster: hypothetical protein
           TTHERM_00678500; n=1; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00678500 - Tetrahymena
           thermophila SB210
          Length = 507

 Score = 33.1 bits (72), Expect = 6.6
 Identities = 35/130 (26%), Positives = 51/130 (39%), Gaps = 4/130 (3%)
 Frame = -1

Query: 640 IIVLPNYGKSIPKEVNVHNNSVSELY----EI*I*DLRLGIKS*PNYCE*EVTLFQSASW 473
           I +  NY  ++ K + VH NS  +L     +I I  L    K    Y        Q    
Sbjct: 80  IQIQKNYILNLQKSIKVHQNSQLQLQKTKNKIQISQLNSLQKENKKYEVMPCLAIQGKKK 139

Query: 472 MTQVNLFTGQHE**DLSKTRSKISTVATTCYSGDNLSSTSLSCLESVLVSRFLTNSFLTN 293
             Q+ +   +++  DL K +S++        SGDNL   S   L+    S    N  L N
Sbjct: 140 EMQLQVLKRENKKQDLEKEKSQVKEEKKNLISGDNLKVES-QLLQQAYESNPCINQ-LNN 197

Query: 292 KCFSRKSDLI 263
           KC  RK   +
Sbjct: 198 KCEKRKEGFV 207


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 581,533,067
Number of Sequences: 1657284
Number of extensions: 10183975
Number of successful extensions: 22542
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 21924
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22539
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 54132236449
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)