Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0487
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   4.1  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   4.1  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   4.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.5  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    21   9.5  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 416 SLAQILLFVLSSKEIHLRHPTRTLEQCYFLFAIIWL 523
           S A  LLF+L      LR     LE+ YF ++  +L
Sbjct: 294 SFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFL 329


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 416 SLAQILLFVLSSKEIHLRHPTRTLEQCYFLFAIIWL 523
           S A  LLF+L      LR     LE+ YF ++  +L
Sbjct: 294 SFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFL 329


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 22.2 bits (45), Expect = 4.1
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +2

Query: 416 SLAQILLFVLSSKEIHLRHPTRTLEQCYFLFAIIWL 523
           S A  LLF+L      LR     LE+ YF ++  +L
Sbjct: 294 SFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFL 329


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 579 VFPNYMKSRSKIY 541
           VFPNY+++ S ++
Sbjct: 62  VFPNYIRTTSMVF 74


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 6/13 (46%), Positives = 11/13 (84%)
 Frame = -2

Query: 579 VFPNYMKSRSKIY 541
           VFPNY+++ S ++
Sbjct: 62  VFPNYIRTTSMVF 74


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,201
Number of Sequences: 336
Number of extensions: 2781
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)