Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0482
         (585 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory recept...    24   1.1  
X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.       23   1.4  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    23   1.4  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    23   1.4  
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   1.4  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   1.4  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    23   1.4  
AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax pr...    23   1.4  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           23   1.4  
AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax pr...    23   1.4  
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    23   1.4  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    23   1.4  
AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A prot...    23   1.4  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    23   1.4  
AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax pr...    22   3.3  
AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax prot...    22   3.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    22   4.4  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   7.7  
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   7.7  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   7.7  

>AM292322-1|CAL23134.1|  373|Tribolium castaneum gustatory receptor
           candidate 1 protein.
          Length = 373

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -2

Query: 437 LASLITRREILFGIGQYILFC-NYLFLT 357
           L+ L+TR   +FG+G  ++F  ++L +T
Sbjct: 229 LSKLVTRFNEIFGLGLLLMFAVSFLIIT 256


>X72339-1|CAA51066.1|  133|Tribolium castaneum abdominal protein.
          Length = 133

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 32  TRRRRIEIAHALCLTERQIKIWFQNR 57


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 246 TRRRRIEIAHALCLTERQIKIWFQNR 271


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 246 TRRRRIEIAHALCLTERQIKIWFQNR 271


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 268 TRRRRIEIAHALCLTERQIKIWFQNR 293


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/28 (35%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
 Frame = -2

Query: 437 LASLITRREILFGIGQYILF-CNYLFLT 357
           L+ L+TR   +FG+G  ++F  ++L +T
Sbjct: 585 LSKLVTRFNEIFGLGLLLMFGVSFLLIT 612


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 246 TRRRRIEIAHALCLTERQIKIWFQNR 271


>AF416773-1|AAL09697.1|  268|Tribolium castaneum cephalothorax
           protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 202 TRRRRIEIAHALCLTERQIKIWFQNR 227


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 246 TRRRRIEIAHALCLTERQIKIWFQNR 271


>AF264695-1|AAG13009.1|  100|Tribolium castaneum cephalothorax
           protein.
          Length = 100

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 34  TRRRRIEIAHALCLTERQIKIWFQNR 59


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 270 TRRRRIEIAHALCLTERQIKIWFQNR 295


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 246 TRRRRIEIAHALCLTERQIKIWFQNR 271


>AF017415-2|AAB70263.1|  284|Tribolium castaneum abdominal-A
           protein.
          Length = 284

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 183 TRRRRIEIAHALCLTERQIKIWFQNR 208


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 242 TRRRRIEIAHALCLTERQIKIWFQNR 267


>AY074761-1|AAL71874.1|  314|Tribolium castaneum ultrabithorax
           protein.
          Length = 314

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    + + LCL +R+I   F NR
Sbjct: 249 TRRRRIEMAHALCLTERQIKIWFQNR 274


>AF146649-1|AAD38009.1|   96|Tribolium castaneum ultrathorax
           protein.
          Length = 96

 Score = 22.2 bits (45), Expect = 3.3
 Identities = 9/26 (34%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    + + LCL +R+I   F NR
Sbjct: 31  TRRRRIEMAHALCLTERQIKIWFQNR 56


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.8 bits (44), Expect = 4.4
 Identities = 9/17 (52%), Positives = 12/17 (70%)
 Frame = -3

Query: 241 DKAKNIKYRSVTLTRLR 191
           D+ KNIKYR++  T  R
Sbjct: 115 DEEKNIKYRNLLETTTR 131


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 433 HHSLHEGKSYLGLANTYY 380
           HH LHE K  L + + Y+
Sbjct: 128 HHFLHENKYQLEVDSGYH 145


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 433 HHSLHEGKSYLGLANTYY 380
           HH LHE K  L + + Y+
Sbjct: 128 HHFLHENKYQLEVDSGYH 145


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.0 bits (42), Expect = 7.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -3

Query: 433 HHSLHEGKSYLGLANTYY 380
           HH LHE K  L + + Y+
Sbjct: 128 HHFLHENKYQLEVDSGYH 145


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 138,322
Number of Sequences: 336
Number of extensions: 2914
Number of successful extensions: 20
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14621740
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)