Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0482
         (585 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.    25   2.4  
AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeot...    23   5.5  
AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeo...    23   5.5  
AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced ...    23   5.5  
AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.            23   7.3  
AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    23   9.6  

>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
          Length = 1133

 Score = 24.6 bits (51), Expect = 2.4
 Identities = 8/19 (42%), Positives = 15/19 (78%)
 Frame = -2

Query: 539 IMKIVMFNFICLSKMILEY 483
           ++KIV+ NF+C   M++E+
Sbjct: 87  VLKIVLKNFMCHRHMVVEF 105


>AF080566-1|AAC31946.1|  308|Anopheles gambiae abdominal-A homeotic
           protein protein.
          Length = 308

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 164 TRRRRIEIAHALCLTERQIKIWFQNR 189


>AF080565-1|AAC31945.1|  324|Anopheles gambiae Antennapedia homeotic
           protein protein.
          Length = 324

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 270 TRRRRIEIAHALCLTERQIKIWFQNR 295


>AF080564-1|AAC31944.1|  372|Anopheles gambiae Sex combs reduced
           homeotic protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 5.5
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 197 SRQSYRSILYVLCLVKRKINFVFDNR 274
           +R+    I + LCL +R+I   F NR
Sbjct: 306 TRRRRIEIAHALCLTERQIKIWFQNR 331


>AY578807-1|AAT07312.1|  438|Anopheles gambiae punt protein.
          Length = 438

 Score = 23.0 bits (47), Expect = 7.3
 Identities = 7/20 (35%), Positives = 15/20 (75%)
 Frame = -2

Query: 71  NGHVCEYLVSFPLTFTGLCQ 12
           NG +C++L +  +++T LC+
Sbjct: 200 NGSLCDFLKAHTVSWTELCK 219


>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
            protein.
          Length = 3325

 Score = 22.6 bits (46), Expect = 9.6
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -2

Query: 518  NFICLSKMILEYQDFCMHYDYSRLIGVLASLITRREILFG 399
            NF+       ++Q+FC  Y Y R +     LI     ++G
Sbjct: 1513 NFLGSFNYYCDHQNFCHPYCYRRHMRAATKLIRAIRKIYG 1552


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 597,540
Number of Sequences: 2352
Number of extensions: 12105
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 55927431
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)