Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0481
         (602 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK058072-1|BAB71650.2|  633|Homo sapiens protein ( Homo sapiens ...    33   1.0  
AB051516-1|BAB21820.1| 1020|Homo sapiens KIAA1729 protein protein.     33   1.0  
AJ253074-1|CAB76526.1|   99|Homo sapiens immunoglobulin heavy ch...    32   1.4  
AJ245035-1|CAB44169.1|  123|Homo sapiens immunoglobulin mu heavy...    31   2.4  
AF304492-1|AAG25648.1|  106|Homo sapiens immunoglobulin heavy ch...    31   2.4  
AJ245051-1|CAB44184.1|  125|Homo sapiens immunoglobulin mu heavy...    31   4.1  
AJ244937-1|CAB44072.1|  119|Homo sapiens immunoglobulin mu heavy...    29   9.5  
AF304511-1|AAG25666.1|  113|Homo sapiens immunoglobulin heavy ch...    29   9.5  
AF283784-1|AAG44858.1|  128|Homo sapiens immunoglobulin heavy ch...    29   9.5  
AF062217-1|AAC18253.1|  138|Homo sapiens immunoglobulin heavy ch...    29   9.5  

>AK058072-1|BAB71650.2|  633|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25343 fis, clone TST01040. ).
          Length = 633

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 6   PPPQPDRAGRRARTHHS*YPH--DLTSQQRHDRVARRRPMFTGVHVPMG 146
           PP      G R  TH   YPH  D ++++   RVAR+  + T V +P G
Sbjct: 286 PPNDGGITGNRQLTHQQIYPHFADGSNRKTKSRVARKAHVATPVLIPKG 334


>AB051516-1|BAB21820.1| 1020|Homo sapiens KIAA1729 protein protein.
          Length = 1020

 Score = 32.7 bits (71), Expect = 1.0
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 2/49 (4%)
 Frame = +3

Query: 6   PPPQPDRAGRRARTHHS*YPH--DLTSQQRHDRVARRRPMFTGVHVPMG 146
           PP      G R  TH   YPH  D ++++   RVAR+  + T V +P G
Sbjct: 673 PPNDGGITGNRQLTHQQIYPHFADGSNRKTKSRVARKAHVATPVLIPKG 721


>AJ253074-1|CAB76526.1|   99|Homo sapiens immunoglobulin heavy chain
           protein.
          Length = 99

 Score = 32.3 bits (70), Expect = 1.4
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 3/73 (4%)
 Frame = +2

Query: 116 YVYWCARPNGRPLMWN*SQNHDRAKNMLLSVRVNSPL---QSRHPLNMKKNTL*AQTKTV 286
           Y  W  +P G+ L W    NH  + N   S++    +    S++  ++K N++ A   T 
Sbjct: 24  YWTWIRQPPGKGLEWIGEINHSGSTNKTPSLKSRVTMSVDSSKNQFSLKLNSVTA-ADTA 82

Query: 287 AHYCSTRNGQQKL 325
            +YC+ R G   L
Sbjct: 83  VYYCARRFGDNDL 95


>AJ245035-1|CAB44169.1|  123|Homo sapiens immunoglobulin mu heavy
           chain variable region protein.
          Length = 123

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 22/78 (28%), Positives = 35/78 (44%), Gaps = 3/78 (3%)
 Frame = +2

Query: 116 YVYWCARPNGRPLMWN*SQNHDRAKNMLLSVRVNSPLQ---SRHPLNMKKNTL*AQTKTV 286
           Y  W  +P GR L W    NH    N   S++    +    S++  ++K +++ A    V
Sbjct: 33  YWSWIRQPPGRGLEWIGEVNHSGRINYNPSLKSRVTISVDTSKNQFSLKLSSVTAADTAV 92

Query: 287 AHYCSTRNGQQKL*LHSY 340
             YC  R G+  + LH Y
Sbjct: 93  --YCCARGGRTWIELHRY 108


>AF304492-1|AAG25648.1|  106|Homo sapiens immunoglobulin heavy chain
           VDJ region protein.
          Length = 106

 Score = 31.5 bits (68), Expect = 2.4
 Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
 Frame = +2

Query: 116 YVYWCARPNGRPLMWN*SQNHDRAKNM--LLSVRVNSPLQ-SRHPLNMKKNTL*AQTKTV 286
           Y  W  +P G+ L W    NH  + N    L  RV   +  S+H  ++K +++ A  +T 
Sbjct: 17  YWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTMSVDTSKHHFSLKLSSVTA-AETA 75

Query: 287 AHYCSTRNGQQKL*LHSY*FRFY 355
            +YC+ R   +   LH + F ++
Sbjct: 76  VYYCARRRRGE---LHPFYFDYW 95


>AJ245051-1|CAB44184.1|  125|Homo sapiens immunoglobulin mu heavy
           chain variable region protein.
          Length = 125

 Score = 30.7 bits (66), Expect = 4.1
 Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +2

Query: 116 YVYWCARPNGRPLMWN*SQNHDRAKNMLLSVRVNSPLQ---SRHPLNMKKNTL*AQTKTV 286
           Y  W  +P G+ L W    NH  + N   S++    +    S++  ++K N++ A   T 
Sbjct: 33  YWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLNSVTA-ADTA 91

Query: 287 AHYCSTRN 310
            +YC+T N
Sbjct: 92  VYYCATVN 99


>AJ244937-1|CAB44072.1|  119|Homo sapiens immunoglobulin mu heavy
           chain variable region protein.
          Length = 119

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
 Frame = +2

Query: 116 YVYWCARPNGRPLMWN*SQNHDRAKNMLLSVRVNSPLQ---SRHPLNMKKNTL*AQTKTV 286
           Y  W  +P G+ L W    NH  + N   S++    +    S++  ++K +++ A   T 
Sbjct: 33  YWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTA-ADTA 91

Query: 287 AHYCSTRNG 313
            +YC+ R G
Sbjct: 92  VYYCARRGG 100


>AF304511-1|AAG25666.1|  113|Homo sapiens immunoglobulin heavy chain
           VDJ region protein.
          Length = 113

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 18/67 (26%), Positives = 32/67 (47%), Gaps = 3/67 (4%)
 Frame = +2

Query: 116 YVYWCARPNGRPLMWN*SQNHDRAKNMLLSVRVNSPLQ---SRHPLNMKKNTL*AQTKTV 286
           Y  W  +P G+ L W    NH  + N   SV+    +    S++  ++K N++ A   T 
Sbjct: 17  YWTWIRQPPGKGLEWIGEINHSGSTNYNASVKSRVTISVDTSKNQFSLKLNSVTA-ADTA 75

Query: 287 AHYCSTR 307
            +YC+ +
Sbjct: 76  LYYCARK 82


>AF283784-1|AAG44858.1|  128|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 128

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
 Frame = +2

Query: 116 YVYWCARPNGRPLMWN*SQNHDRAKNMLLSVRVNSPLQ---SRHPLNMKKNTL*AQTKTV 286
           Y  W  +P G+ L W    NH  + N   S++    +    S++  ++K N++ A   T 
Sbjct: 51  YWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLNSVTA-ADTA 109

Query: 287 AHYCSTRN 310
            +YC++ N
Sbjct: 110 VYYCASGN 117


>AF062217-1|AAC18253.1|  138|Homo sapiens immunoglobulin heavy chain
           variable region protein.
          Length = 138

 Score = 29.5 bits (63), Expect = 9.5
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
 Frame = +2

Query: 116 YVYWCARPNGRPLMWN*SQNHDRAKNM--LLSVRVNSPLQ-SRHPLNMKKNTL*AQTKTV 286
           Y +W  +P G+ L W    NH  + N    L  RV   +  S++  ++K +++ A   T 
Sbjct: 52  YWHWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTMSVDTSKNQFSLKLSSVTA-ADTA 110

Query: 287 AHYCST-RNG 313
            +YC+  RNG
Sbjct: 111 VYYCARGRNG 120


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 85,408,414
Number of Sequences: 237096
Number of extensions: 1732306
Number of successful extensions: 9360
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 9231
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9359
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)