Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0480
(708 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 150 8e-37
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 150 8e-37
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 150 8e-37
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 150 8e-37
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 149 1e-36
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 149 1e-36
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 146 2e-35
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 91 9e-19
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 89 3e-18
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 89 3e-18
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 89 3e-18
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 87 8e-18
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 87 1e-17
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 87 1e-17
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 86 2e-17
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 82 3e-16
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 55 5e-08
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 54 7e-08
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 2.3
At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid t... 29 3.0
At2g31690.1 68415.m03868 lipase class 3 family protein similar t... 28 5.3
At5g59380.1 68418.m07441 methyl-CpG-binding domain-containing pr... 28 7.0
At4g10440.1 68417.m01716 dehydration-responsive family protein s... 27 9.2
At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger) fa... 27 9.2
At2g15480.1 68415.m01771 UDP-glucoronosyl/UDP-glucosyl transfera... 27 9.2
At1g52160.1 68414.m05887 metallo-beta-lactamase family protein 27 9.2
At1g33170.1 68414.m04096 dehydration-responsive family protein s... 27 9.2
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 150 bits (364), Expect = 8e-37
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 436 LADQCTGLQGFLIFH 480
LAD CTGLQGFL+F+
Sbjct: 125 LADNCTGLQGFLVFN 139
Score = 140 bits (338), Expect = 1e-33
Identities = 56/63 (88%), Positives = 62/63 (98%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 245 HVP 253
HVP
Sbjct: 61 HVP 63
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYN + S + LEH + + NE
Sbjct: 151 SLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS-LLEHTDVSILLD-NEA 208
Query: 693 IYDIC 707
IYDIC
Sbjct: 209 IYDIC 213
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 150 bits (364), Expect = 8e-37
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 436 LADQCTGLQGFLIFH 480
LAD CTGLQGFL+F+
Sbjct: 125 LADNCTGLQGFLVFN 139
Score = 140 bits (338), Expect = 1e-33
Identities = 56/63 (88%), Positives = 62/63 (98%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 245 HVP 253
HVP
Sbjct: 61 HVP 63
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYN + S + LEH + + NE
Sbjct: 151 SLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS-LLEHTDVSILLD-NEA 208
Query: 693 IYDIC 707
IYDIC
Sbjct: 209 IYDIC 213
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 150 bits (364), Expect = 8e-37
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 436 LADQCTGLQGFLIFH 480
LAD CTGLQGFL+F+
Sbjct: 125 LADNCTGLQGFLVFN 139
Score = 141 bits (341), Expect = 5e-34
Identities = 56/63 (88%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 245 HVP 253
HVP
Sbjct: 61 HVP 63
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYN + S + LEH + + NE
Sbjct: 151 SLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS-LLEHTDVSILLD-NEA 208
Query: 693 IYDIC 707
IYDIC
Sbjct: 209 IYDIC 213
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 150 bits (364), Expect = 8e-37
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRK 124
Query: 436 LADQCTGLQGFLIFH 480
LAD CTGLQGFL+F+
Sbjct: 125 LADNCTGLQGFLVFN 139
Score = 141 bits (341), Expect = 5e-34
Identities = 56/63 (88%), Positives = 63/63 (100%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRECIS+H+GQAG+Q+GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 245 HVP 253
HVP
Sbjct: 61 HVP 63
Score = 79.0 bits (186), Expect = 3e-15
Identities = 41/65 (63%), Positives = 49/65 (75%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
SLL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYN + S + LEH + + NE
Sbjct: 151 SLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSVLSTHS-LLEHTDVSILLD-NEA 208
Query: 693 IYDIC 707
IYDIC
Sbjct: 209 IYDIC 213
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 149 bits (362), Expect = 1e-36
Identities = 66/75 (88%), Positives = 73/75 (97%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 436 LADQCTGLQGFLIFH 480
LAD CTGLQGFL+F+
Sbjct: 125 LADNCTGLQGFLVFN 139
Score = 122 bits (295), Expect = 2e-28
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 245 HVP 253
HVP
Sbjct: 61 HVP 63
Score = 81.0 bits (191), Expect = 7e-16
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYN + S + LEH + + NE
Sbjct: 151 SLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHS-LLEHTDVAVLLD-NEA 208
Query: 693 IYDIC 707
IYDIC
Sbjct: 209 IYDIC 213
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 149 bits (362), Expect = 1e-36
Identities = 66/75 (88%), Positives = 73/75 (97%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AVFVDLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RK
Sbjct: 65 AVFVDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRK 124
Query: 436 LADQCTGLQGFLIFH 480
LAD CTGLQGFL+F+
Sbjct: 125 LADNCTGLQGFLVFN 139
Score = 122 bits (295), Expect = 2e-28
Identities = 49/63 (77%), Positives = 57/63 (90%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 245 HVP 253
HVP
Sbjct: 61 HVP 63
Score = 81.0 bits (191), Expect = 7e-16
Identities = 43/65 (66%), Positives = 49/65 (75%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
SLL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYN + S + LEH + + NE
Sbjct: 151 SLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHS-LLEHTDVAVLLD-NEA 208
Query: 693 IYDIC 707
IYDIC
Sbjct: 209 IYDIC 213
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 146 bits (353), Expect = 2e-35
Identities = 66/91 (72%), Positives = 76/91 (83%)
Frame = +1
Query: 208 FQHFLQRDRSWQARTPAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHY 387
F F S Q AVF+DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHY
Sbjct: 49 FNTFFSETSSGQHVPRAVFLDLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHY 108
Query: 388 TIGKEIVDLVLDRIRKLADQCTGLQGFLIFH 480
T+G+EIVD L+R+RKLAD CTGLQGFL+F+
Sbjct: 109 TVGREIVDTCLERLRKLADNCTGLQGFLVFN 139
Score = 117 bits (282), Expect = 7e-27
Identities = 46/63 (73%), Positives = 56/63 (88%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE IS+H+GQAG+Q+GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 245 HVP 253
HVP
Sbjct: 61 HVP 63
Score = 81.0 bits (191), Expect = 7e-16
Identities = 43/65 (66%), Positives = 50/65 (76%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
SLL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYN + S + LEH +V+ NE
Sbjct: 151 SLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSVLSTHS-LLEHTDVVVLLD-NEA 208
Query: 693 IYDIC 707
IYDIC
Sbjct: 209 IYDIC 213
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 90.6 bits (215), Expect = 9e-19
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
A+ +DLEP +D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AILMDLEPGTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 122
Query: 436 LADQCTGLQGFLIFH 480
A+ C LQGF + H
Sbjct: 123 EAENCDCLQGFQVCH 137
Score = 51.6 bits (118), Expect = 5e-07
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETG 235
MRE + + GQ G QIG+ WE+ C EHGI P G + +G D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 236 AGKHVP 253
G++VP
Sbjct: 56 CGRYVP 61
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
+LL+ ++ +Y + L F+++P+P+VS VVEPYN S Q +E+ + NE
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS-VHQLVENADECMVLD-NEA 206
Query: 693 IYDIC 707
+YDIC
Sbjct: 207 LYDIC 211
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 89.0 bits (211), Expect = 3e-18
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 LADQCTGLQGFLIFH 480
A+ C LQGF + H
Sbjct: 123 EAENCDCLQGFQVCH 137
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/63 (34%), Positives = 33/63 (52%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 245 HVP 253
VP
Sbjct: 59 FVP 61
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
+LL+ ++ +Y + L F+++P+P+VS VVEPYN S Q +E+ + NE
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS-VHQLVENADECMVLD-NEA 206
Query: 693 IYDIC 707
+YDIC
Sbjct: 207 LYDIC 211
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 89.0 bits (211), Expect = 3e-18
Identities = 38/75 (50%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AV +DLEP +D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 LADQCTGLQGFLIFH 480
A+ C LQGF + H
Sbjct: 123 EAENCDCLQGFQVCH 137
Score = 48.0 bits (109), Expect = 6e-06
Identities = 23/63 (36%), Positives = 35/63 (55%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 245 HVP 253
+VP
Sbjct: 59 YVP 61
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
+LL+ ++ +Y + + F+++P+P+VS VVEPYN S Q +E+ + NE
Sbjct: 149 TLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLS-VHQLVENADECMVLD-NEA 206
Query: 693 IYDIC 707
+YDIC
Sbjct: 207 LYDIC 211
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 89.0 bits (211), Expect = 3e-18
Identities = 37/75 (49%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AV +DLEP +D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 64 AVLMDLEPGTMDSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 123
Query: 436 LADQCTGLQGFLIFH 480
A+ C LQGF + H
Sbjct: 124 EAENCDCLQGFQVCH 138
Score = 51.6 bits (118), Expect = 5e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + V GQ G QIG+ WE+ C EHG+ P G+ D + + N +++E G+
Sbjct: 1 MREILHVQGGQCGNQIGSKFWEVICDEHGVDPTGRYNGD-SADLQLERINVYYNEASGGR 59
Query: 245 HVP 253
+VP
Sbjct: 60 YVP 62
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
+LL+ ++ +Y + L F+++P+P+VS VVEPYN S Q +E+ + NE
Sbjct: 150 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS-VHQLVENADECMVLD-NEA 207
Query: 693 IYDIC 707
+YDIC
Sbjct: 208 LYDIC 212
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 87.4 bits (207), Expect = 8e-18
Identities = 36/75 (48%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 64 AVLMDLEPGTMDSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRK 123
Query: 436 LADQCTGLQGFLIFH 480
A+ C LQGF + H
Sbjct: 124 EAENCDCLQGFQVCH 138
Score = 50.4 bits (115), Expect = 1e-06
Identities = 24/63 (38%), Positives = 35/63 (55%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 245 HVP 253
+VP
Sbjct: 60 YVP 62
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
+LL+ ++ +Y + L F+++P+P+VS VVEPYN S Q +E+ + NE
Sbjct: 150 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS-VHQLVENADECMVLD-NEA 207
Query: 693 IYDIC 707
+YDIC
Sbjct: 208 LYDIC 212
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/75 (49%), Positives = 51/75 (68%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 LADQCTGLQGFLIFH 480
A+ C LQGF + H
Sbjct: 123 EAENCDCLQGFQVCH 137
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 245 HVP 253
VP
Sbjct: 59 FVP 61
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
+LL+ ++ +Y + L F+++P+P+VS VVEPYN S Q +E+ + NE
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS-VHQLVENADECMVLD-NEA 206
Query: 693 IYDIC 707
+YDIC
Sbjct: 207 LYDIC 211
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 86.6 bits (205), Expect = 1e-17
Identities = 37/75 (49%), Positives = 51/75 (68%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AV +DLEP +D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 LADQCTGLQGFLIFH 480
A+ C LQGF + H
Sbjct: 123 EAENCDCLQGFQVCH 137
Score = 52.4 bits (120), Expect = 3e-07
Identities = 24/63 (38%), Positives = 34/63 (53%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 245 HVP 253
VP
Sbjct: 59 FVP 61
Score = 45.2 bits (102), Expect = 4e-05
Identities = 24/65 (36%), Positives = 39/65 (60%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
+LL+ ++ +Y + L F+++P+P+VS VVEPYN S Q +E+ + NE
Sbjct: 149 TLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLS-VHQLVENADECMVLD-NEA 206
Query: 693 IYDIC 707
+YDIC
Sbjct: 207 LYDIC 211
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 86.2 bits (204), Expect = 2e-17
Identities = 36/75 (48%), Positives = 52/75 (69%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 LADQCTGLQGFLIFH 480
A+ C LQGF + H
Sbjct: 123 EAENCDCLQGFQVCH 137
Score = 52.0 bits (119), Expect = 4e-07
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 245 HVP 253
+VP
Sbjct: 59 YVP 61
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
+LL+ ++ +Y + + F+++P+P+VS VVEPYN S Q +E+ + NE
Sbjct: 149 TLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLS-VHQLVENADECMVLD-NEA 206
Query: 693 IYDIC 707
+YDIC
Sbjct: 207 LYDIC 211
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 82.2 bits (194), Expect = 3e-16
Identities = 35/75 (46%), Positives = 51/75 (68%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRK 435
AV +DLEP +D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK
Sbjct: 63 AVLMDLEPGTMDSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRK 122
Query: 436 LADQCTGLQGFLIFH 480
A+ LQGF + H
Sbjct: 123 EAENSDCLQGFQVCH 137
Score = 50.4 bits (115), Expect = 1e-06
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = +2
Query: 65 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 244
MRE + + GQ G QIG WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 245 HVP 253
+VP
Sbjct: 59 YVP 61
Score = 44.4 bits (100), Expect = 8e-05
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNFLFSPPTQTLEHF*LVLSWSTNET 692
+LL+ ++ +Y + + F+++P+P+VS VVEPYN S Q +E+ + NE
Sbjct: 149 TLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLS-VHQLVENADECMVLD-NEA 206
Query: 693 IYDIC 707
+YDIC
Sbjct: 207 LYDIC 211
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 54.8 bits (126), Expect = 5e-08
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRI 429
A+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I
Sbjct: 64 ALLIDLEPRVINGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMI 122
Query: 430 RKLADQCTGLQGFLIFH 480
+ AD L+GF++ H
Sbjct: 123 DREADGSDSLEGFVLCH 139
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +2
Query: 68 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 247
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 248 VP 253
+P
Sbjct: 61 IP 62
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNFLFSPPTQTL 650
S L+E L+ Y KK ++++P + S VV+PYN L + TL
Sbjct: 151 SYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTL 197
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 54.4 bits (125), Expect = 7e-08
Identities = 26/77 (33%), Positives = 46/77 (59%), Gaps = 2/77 (2%)
Frame = +1
Query: 256 AVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDRI 429
A+ +DLEP V++ ++ G YR L++ E + A NN+A G++ GK + + ++D I
Sbjct: 64 ALLIDLEPRVINGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMI 122
Query: 430 RKLADQCTGLQGFLIFH 480
+ AD L+GF++ H
Sbjct: 123 DREADGSDSLEGFVLCH 139
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/62 (41%), Positives = 34/62 (54%)
Frame = +2
Query: 68 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 247
RE I++ VGQ G QIG W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 248 VP 253
+P
Sbjct: 61 IP 62
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Frame = +3
Query: 513 SLLMERLSVDYGKKSKLEFAIYP-APQVSTAVVEPYNFLFSPPTQTL 650
S L+E L+ Y KK ++++P + S VV+PYN L + TL
Sbjct: 151 SYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLKRLTL 197
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 2.3
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = -1
Query: 501 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYD 403
+G TEGVED S LV D ++ QI D
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRD 641
>At5g09370.1 68418.m01085 protease inhibitor/seed storage/lipid
transfer protein (LTP) family protein similar to lipid
transfer protein - Hordeum vulgare, EMBL:AF109195;
contains Pfam protease inhibitor/seed storage/LTP family
domain PF00234
Length = 158
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/42 (33%), Positives = 17/42 (40%)
Frame = -1
Query: 234 PVSLKKVLKESSPPPMVLSVGIWPSGWMPCSRQ*SSQQALPI 109
PVS L +SPP +W SGW P +PI
Sbjct: 101 PVSACDSLPPASPPTANGQAPVWGSGWAPAPSPSKGNSLIPI 142
>At2g31690.1 68415.m03868 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile PF01764: Lipase
Length = 484
Score = 28.3 bits (60), Expect = 5.3
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = -1
Query: 288 NNSRFKIDEDSRGTCLPAPVSLKKVLKESSPPPM 187
N R K S + L APV L + SSPPP+
Sbjct: 38 NPKRLKTANSSSSSSLLAPVILNSPVASSSPPPI 71
>At5g59380.1 68418.m07441 methyl-CpG-binding domain-containing
protein similar to testis specific methyl-CpG binding
protein MBD2 [Homo sapiens] GI:3800801; contains Pfam
profile PF01429: Methyl-CpG binding domain
Length = 225
Score = 27.9 bits (59), Expect = 7.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = -2
Query: 506 PEPVPPPKEWKIRNPCRPVHWS 441
P P PPP ++ +NP V WS
Sbjct: 161 PPPPPPPLDFDFKNPPDKVSWS 182
>At4g10440.1 68417.m01716 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 633
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 433 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 344
C P PN + PF+W ++ + ++P++
Sbjct: 136 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 165
>At3g43750.1 68416.m04674 zinc finger (C3HC4-type RING finger)
family protein contains a zinc finger, C3HC4 type (RING
finger), signature, PROSITE:PS00518
Length = 346
Score = 27.5 bits (58), Expect = 9.2
Identities = 15/46 (32%), Positives = 23/46 (50%)
Frame = +3
Query: 171 CPQTRPSGVETILSTLSSARPELASTYPCCLRRS*TYCC**GPHWH 308
CP R SG+ + + LS++ E ST CC++ +C WH
Sbjct: 242 CPNPRCSGLMS-KTELSTSTEEDVSTRTCCVKCGEPFCINCKVPWH 286
>At2g15480.1 68415.m01771 UDP-glucoronosyl/UDP-glucosyl transferase
family protein contains Pfam profile: PF00201
UDP-glucoronosyl and UDP-glucosyl transferase
Length = 372
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -1
Query: 657 SAQGFVWVVRIKSCRARRRQWKPE 586
S Q F+WVVR + +W PE
Sbjct: 204 SGQSFIWVVRKNENQGDNEEWLPE 227
>At1g52160.1 68414.m05887 metallo-beta-lactamase family protein
Length = 890
Score = 27.5 bits (58), Expect = 9.2
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 4/68 (5%)
Frame = -3
Query: 253 GYVLASSGLAEESVERIVSTPDGLVCGHLAIRLDAVLQAVKLPAGITD---LDSG-LANV 86
G+ + SG + E + ++ D + H A DA+++ T +D G ANV
Sbjct: 754 GWKMVYSGDSRPCPETVEASRDATILIHEATFEDALIEEALAKNHSTTKEAIDVGSAANV 813
Query: 85 YRDALTHF 62
YR LTHF
Sbjct: 814 YRIVLTHF 821
>At1g33170.1 68414.m04096 dehydration-responsive family protein
similar to early-responsive to dehydration stress ERD3
protein [Arabidopsis thaliana] GI:15320410; contains
Pfam profile PF03141: Putative methyltransferase
Length = 639
Score = 27.5 bits (58), Expect = 9.2
Identities = 8/30 (26%), Positives = 17/30 (56%)
Frame = -3
Query: 433 CGFCPKPNLRFPFQWCSDHGHSCWPHLPYQ 344
C P PN + PF+W ++ + ++P++
Sbjct: 153 CLIPPPPNYKIPFKWPQSRDYAWYDNIPHK 182
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,714,632
Number of Sequences: 28952
Number of extensions: 380646
Number of successful extensions: 1243
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1526202912
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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