Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0479
(420 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript... 28 0.16
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren... 25 1.1
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 25 1.1
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote... 24 2.0
U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein. 24 2.6
U50475-1|AAA93477.1| 207|Anopheles gambiae protein ( Anopheles ... 24 2.6
AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein. 24 2.6
AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein. 24 2.6
AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein. 24 2.6
AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative FGF-sign... 23 6.0
CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein. 22 7.9
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi... 22 7.9
>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
protein.
Length = 1173
Score = 27.9 bits (59), Expect = 0.16
Identities = 17/37 (45%), Positives = 18/37 (48%)
Frame = -3
Query: 277 AAAGRSREFCIPPPPTPRTACVERRTPAGSWAAAPLR 167
A R E PPPP+PRT ERR A A LR
Sbjct: 1069 ATQQRQAERLPPPPPSPRT---ERRREVNRLAVARLR 1102
>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
methoprene-tolerant protein protein.
Length = 1115
Score = 25.0 bits (52), Expect = 1.1
Identities = 14/51 (27%), Positives = 22/51 (43%)
Frame = -3
Query: 289 SDTLAAAGRSREFCIPPPPTPRTACVERRTPAGSWAAAPLRRAR*CSQHIS 137
S+ AA G + E +PP P + + +P+G P+ S H S
Sbjct: 813 SEEAAAVGANVEQRVPPLPNSQHYFTQPFSPSGGTTPVPVSLLSPASSHYS 863
Score = 23.8 bits (49), Expect = 2.6
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 46 TVYQGYGENKLLARSAAVEQAVRDIIIKKI 135
++ GYGE LA A + +V+ I+K I
Sbjct: 691 SIKSGYGEGAPLAIVAPEKNSVKSAIVKSI 720
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 25.0 bits (52), Expect = 1.1
Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Frame = -3
Query: 343 SSAPAVAPPTGPDCV---LSESDTLAAAGRSREFCIPPPPTPRTACVERRT--PAGSWAA 179
++A +AP TG + + DT A E +P PP P T+ +RRT PA S AA
Sbjct: 1179 TTAAPLAPTTGNSKGGGGVVQGDTATALD---EVALPAPPAPPTSKRDRRTSGPAVSDAA 1235
>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
protein.
Length = 1645
Score = 24.2 bits (50), Expect = 2.0
Identities = 14/38 (36%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = -3
Query: 283 TLAAAGRSREFCIPPPP-TPRTACVERRTPAGSWAAAP 173
T S E +PP P T T VER P + AP
Sbjct: 1524 TAIPEANSEEDIVPPAPATATTKSVEREEPVRASGKAP 1561
>U51225-1|AAA96405.1| 692|Anopheles gambiae hexamerin protein.
Length = 692
Score = 23.8 bits (49), Expect = 2.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 156 DALSTFLDLFDDDVSDGL 103
D L T+ D FD DVS+ L
Sbjct: 458 DKLMTYFDYFDSDVSNVL 475
>U50475-1|AAA93477.1| 207|Anopheles gambiae protein ( Anopheles
gambiae putativearylphorin precursor, mRNA, partial cds.
).
Length = 207
Score = 23.8 bits (49), Expect = 2.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 156 DALSTFLDLFDDDVSDGL 103
D L T+ D FD DVS+ L
Sbjct: 126 DKLMTYFDYFDSDVSNVL 143
>AF020872-1|AAC31875.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.8 bits (49), Expect = 2.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 156 DALSTFLDLFDDDVSDGL 103
D L T+ D FD DVS+ L
Sbjct: 458 DKLMTYFDYFDSDVSNVL 475
>AF020871-1|AAC31874.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.8 bits (49), Expect = 2.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 156 DALSTFLDLFDDDVSDGL 103
D L T+ D FD DVS+ L
Sbjct: 458 DKLMTYFDYFDSDVSNVL 475
>AF020870-1|AAC31873.1| 692|Anopheles gambiae hexamerin A protein.
Length = 692
Score = 23.8 bits (49), Expect = 2.6
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -1
Query: 156 DALSTFLDLFDDDVSDGL 103
D L T+ D FD DVS+ L
Sbjct: 458 DKLMTYFDYFDSDVSNVL 475
>AJ439060-10|CAD27761.1| 1197|Anopheles gambiae putative
FGF-signaling promoter protein.
Length = 1197
Score = 22.6 bits (46), Expect = 6.0
Identities = 11/27 (40%), Positives = 16/27 (59%)
Frame = +3
Query: 288 DSESTQSGPVGGATAGADEHKPSKPAK 368
+ ++ SGP G + A EHK KPA+
Sbjct: 16 NEDAAASGPSGESAADVVEHK--KPAR 40
>CR954256-1|CAJ14142.1| 376|Anopheles gambiae actin protein.
Length = 376
Score = 22.2 bits (45), Expect = 7.9
Identities = 11/43 (25%), Positives = 20/43 (46%)
Frame = +1
Query: 49 VYQGYGENKLLARSAAVEQAVRDIIIKKIKKCAESITEPAEEE 177
+Y+GY + R + + D ++K + + S T AE E
Sbjct: 166 IYEGYALPHAILRMDLAGRDLTDYLMKILTERGYSFTTTAERE 208
>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
topoisomerase protein.
Length = 1039
Score = 22.2 bits (45), Expect = 7.9
Identities = 15/58 (25%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +3
Query: 192 PAGVLRSTQAVL--GVGGGGIQNSLLRPAAASVSDSESTQSGPVGGATAGADEHKPSK 359
P+ L V+ GVGGGG S + +++ S+ S + +G + K K
Sbjct: 932 PSNALAGNNGVIMTGVGGGGGGGSAGGAGSTISNNTNSSSSSGKKSSHSGTNSSKRKK 989
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.316 0.133 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 423,824
Number of Sequences: 2352
Number of extensions: 8540
Number of successful extensions: 36
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34632603
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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