Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0479
(420 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical pr... 30 0.77
AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical ... 30 0.77
AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical... 29 1.0
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 28 3.1
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 28 3.1
U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical pr... 28 3.1
U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four) int... 28 3.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 3.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 3.1
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 28 3.1
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 28 3.1
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 28 3.1
U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family pr... 27 4.1
AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal elemen... 27 4.1
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 27 4.1
Z82278-3|CAB05255.1| 347|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 27 7.2
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 27 7.2
Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 27 7.2
U41624-7|AAF99946.3| 302|Caenorhabditis elegans Hypothetical pr... 27 7.2
Z81529-3|CAB04300.1| 224|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81529-1|CAB04294.1| 224|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical pr... 26 9.5
Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical pr... 26 9.5
U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase su... 26 9.5
AF016432-4|AAB65381.1| 501|Caenorhabditis elegans Udp-glucurono... 26 9.5
AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen prot... 26 9.5
>Z81042-1|CAB02795.1| 1657|Caenorhabditis elegans Hypothetical
protein C27H6.1 protein.
Length = 1657
Score = 29.9 bits (64), Expect = 0.77
Identities = 16/49 (32%), Positives = 21/49 (42%)
Frame = -3
Query: 343 SSAPAVAPPTGPDCVLSESDTLAAAGRSREFCIPPPPTPRTACVERRTP 197
+SAPA PP P+ + + AA R PP PR A + P
Sbjct: 683 TSAPARPPPARPEAPKKDETAVDAAAPPRPPPAARPPPPRPAPANKEKP 731
>AF038619-6|AAB92077.2| 442|Caenorhabditis elegans Hypothetical
protein F56A11.6 protein.
Length = 442
Score = 29.9 bits (64), Expect = 0.77
Identities = 22/77 (28%), Positives = 31/77 (40%)
Frame = -3
Query: 400 MVLALKGRVLILAGLLGLCSSAPAVAPPTGPDCVLSESDTLAAAGRSREFCIPPPPTPRT 221
++ L + + + LGL A A A C+L A GR+ PPP +
Sbjct: 62 VLFLLAAKPSMFSSKLGLILCAVAAASTVTAGCLLFPITATAPKGRAGSAPAPPPGSSTE 121
Query: 220 ACVERRTPAGSWAAAPL 170
V+R A S AA L
Sbjct: 122 DKVKRAAAAASPTAASL 138
>AL132898-14|CAC14406.1| 1641|Caenorhabditis elegans Hypothetical
protein Y59A8B.1a protein.
Length = 1641
Score = 29.5 bits (63), Expect = 1.0
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Frame = -3
Query: 337 APAVAPPTGPDCVLSESDTLAAAGRSREFCIPPPPTPRTACVERRTPAG--SW 185
AP + PP P V++ S AAA R+ PPPP P + + P G SW
Sbjct: 178 APIIPPPQPP--VMTAS---AAAAAYRDRLPPPPPKPPMPDLRTKEPIGIRSW 225
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 19 YCADLTIDGTVYQGYGENKLLARSAAVEQAVRDI 120
YC L ++G +Q NK A+ E VRD+
Sbjct: 139 YCCTLKVNGRTFQMESVNKKAAKQKCSELVVRDL 172
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 19 YCADLTIDGTVYQGYGENKLLARSAAVEQAVRDI 120
YC L ++G +Q NK A+ E VRD+
Sbjct: 139 YCCTLKVNGRTFQMESVNKKAAKQKCSELVVRDL 172
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 19 YCADLTIDGTVYQGYGENKLLARSAAVEQAVRDI 120
YC L ++G +Q NK A+ E VRD+
Sbjct: 205 YCCTLKVNGRTFQMESVNKKAAKQKCSELVVRDL 238
>U70856-4|AAB09167.1| 2090|Caenorhabditis elegans Hypothetical
protein F57F4.4 protein.
Length = 2090
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -3
Query: 361 GLLGLCSSAPAVAPPTGPDCVLSESDTLAAAGRSREFCIPPPPTPRTACVE 209
G G C P A P C SE+D A IP PR C E
Sbjct: 575 GSYGNCGQIPG-ADPQVTGCCCSETDNCLAPAGVNVTAIPARRDPRIVCYE 624
>U70856-3|AAB09166.1| 2153|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 1 protein.
Length = 2153
Score = 27.9 bits (59), Expect = 3.1
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = -3
Query: 361 GLLGLCSSAPAVAPPTGPDCVLSESDTLAAAGRSREFCIPPPPTPRTACVE 209
G G C P A P C SE+D A IP PR C E
Sbjct: 575 GSYGNCGQIPG-ADPQVTGCCCSETDNCLAPAGVNVTAIPARRDPRIVCYE 624
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = -3
Query: 334 PAVAPPTGPDCVLSE-SDTLAAAGRSREFCIPPPPTPRTACVERRTPAGSWAAAP 173
PA PP P +++ S + SR PPP PR A P S A P
Sbjct: 236 PAAPPPPVPTPSIAQMSSRFQSPAISRTLDDAPPPPPRIASKTSVAPTSSRAPLP 290
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 27.9 bits (59), Expect = 3.1
Identities = 18/55 (32%), Positives = 22/55 (40%), Gaps = 1/55 (1%)
Frame = -3
Query: 334 PAVAPPTGPDCVLSE-SDTLAAAGRSREFCIPPPPTPRTACVERRTPAGSWAAAP 173
PA PP P +++ S + SR PPP PR A P S A P
Sbjct: 238 PAAPPPPVPTPSIAQMSSRFQSPAISRTLDDAPPPPPRIASKTSVAPTSSRAPLP 292
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 19 YCADLTIDGTVYQGYGENKLLARSAAVEQAVRDI 120
YC L ++G +Q NK A+ E VRD+
Sbjct: 139 YCCTLKVNGRTFQMESVNKKAAKQKCSELVVRDL 172
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 19 YCADLTIDGTVYQGYGENKLLARSAAVEQAVRDI 120
YC L ++G +Q NK A+ E VRD+
Sbjct: 139 YCCTLKVNGRTFQMESVNKKAAKQKCSELVVRDL 172
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 27.9 bits (59), Expect = 3.1
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +1
Query: 19 YCADLTIDGTVYQGYGENKLLARSAAVEQAVRDI 120
YC L ++G +Q NK A+ E VRD+
Sbjct: 205 YCCTLKVNGRTFQMESVNKKAAKQKCSELVVRDL 238
>U11279-3|AAF99909.1| 423|Caenorhabditis elegans T box family
protein 2 protein.
Length = 423
Score = 27.5 bits (58), Expect = 4.1
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = -3
Query: 346 CSSAPAVAPPTGPDCVLSESDTLAAAG--RSREFCIPPP 236
C P+ P T S + TL+A RS +FCIPPP
Sbjct: 295 CKPEPSQTPTTS-SLSTSTTPTLSAHHPLRSPQFCIPPP 332
>AF016669-1|AAB66098.3| 1758|Caenorhabditis elegans Signal element
on autosome protein2 protein.
Length = 1758
Score = 27.5 bits (58), Expect = 4.1
Identities = 10/13 (76%), Positives = 11/13 (84%)
Frame = -3
Query: 346 CSSAPAVAPPTGP 308
C+SAP VAPPT P
Sbjct: 360 CASAPPVAPPTAP 372
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 27.5 bits (58), Expect = 4.1
Identities = 15/36 (41%), Positives = 21/36 (58%)
Frame = +3
Query: 249 QNSLLRPAAASVSDSESTQSGPVGGATAGADEHKPS 356
QNS++ ++SVS SE+TQS V DE P+
Sbjct: 477 QNSIVMMTSSSVSMSEATQSSSVTMNHHDVDEEGPA 512
>Z82278-3|CAB05255.1| 347|Caenorhabditis elegans Hypothetical
protein M162.3 protein.
Length = 347
Score = 26.6 bits (56), Expect = 7.2
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +1
Query: 214 HKLFSEWEGEGYKIPCFAPP 273
HK F+EWE G K P F P
Sbjct: 20 HKNFTEWEKTGQKRPYFGWP 39
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +3
Query: 72 QAASP--QRGRRASRQRHHHQKD 134
Q+ASP Q+ + S + HHHQKD
Sbjct: 1897 QSASPIPQQSSQRSAKSHHHQKD 1919
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +3
Query: 72 QAASP--QRGRRASRQRHHHQKD 134
Q+ASP Q+ + S + HHHQKD
Sbjct: 1919 QSASPIPQQSSQRSAKSHHHQKD 1941
>Z70686-8|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +3
Query: 72 QAASP--QRGRRASRQRHHHQKD 134
Q+ASP Q+ + S + HHHQKD
Sbjct: 740 QSASPIPQQSSQRSAKSHHHQKD 762
>Z70686-7|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +3
Query: 72 QAASP--QRGRRASRQRHHHQKD 134
Q+ASP Q+ + S + HHHQKD
Sbjct: 718 QSASPIPQQSSQRSAKSHHHQKD 740
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +3
Query: 72 QAASP--QRGRRASRQRHHHQKD 134
Q+ASP Q+ + S + HHHQKD
Sbjct: 1897 QSASPIPQQSSQRSAKSHHHQKD 1919
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/23 (52%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
Frame = +3
Query: 72 QAASP--QRGRRASRQRHHHQKD 134
Q+ASP Q+ + S + HHHQKD
Sbjct: 1919 QSASPIPQQSSQRSAKSHHHQKD 1941
>U41624-7|AAF99946.3| 302|Caenorhabditis elegans Hypothetical
protein F46C8.8 protein.
Length = 302
Score = 26.6 bits (56), Expect = 7.2
Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Frame = -3
Query: 307 DCVLSESDTLAAAGRSREF-CIPPPPTPR 224
D L ++ +A G + E+ +PPPPTPR
Sbjct: 120 DSFLGTGNSRSAGGGADEYENLPPPPTPR 148
>Z81529-3|CAB04300.1| 224|Caenorhabditis elegans Hypothetical
protein F35E8.4 protein.
Length = 224
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 346 CSSAPAVAPPTGPDCVLSESDTLAA 272
CS+A VAPP +C + DT A
Sbjct: 169 CSAATTVAPPVTNNCTVFPPDTRTA 193
>Z81529-1|CAB04294.1| 224|Caenorhabditis elegans Hypothetical
protein F35E8.1 protein.
Length = 224
Score = 26.2 bits (55), Expect = 9.5
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = -3
Query: 346 CSSAPAVAPPTGPDCVLSESDTLAA 272
CS+A VAPP +C + DT A
Sbjct: 169 CSAATTVAPPVTNNCTVFPPDTRTA 193
>Z81518-1|CAB04214.3| 601|Caenorhabditis elegans Hypothetical
protein F28D9.1 protein.
Length = 601
Score = 26.2 bits (55), Expect = 9.5
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -3
Query: 343 SSAPAVAPPTGPDCVLSESDTLAAAGRSREFCIPPPPTP--RTACVERRTPAGSWAAAPL 170
S + + +PP P S S + A R PP P R + + R+PA P
Sbjct: 350 SPSASKSPPPAPKRAKSRSKSPPARRRRSPSASKSPPAPRRRRSPSKSRSPAPKREIPPA 409
Query: 169 RRAR 158
RR R
Sbjct: 410 RRRR 413
>Z81102-6|CAB03207.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +1
Query: 250 KIPCFAPPPPVCXXXXXXXXXXXXXXXXXXTNTSPASPPRSRL 378
++P F PPPPV SPA PP +L
Sbjct: 490 ELPRFQPPPPVARVTHMPRGSLPPYSSATMGAQSPAPPPNGKL 532
>Z81102-4|CAB03204.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +1
Query: 250 KIPCFAPPPPVCXXXXXXXXXXXXXXXXXXTNTSPASPPRSRL 378
++P F PPPPV SPA PP +L
Sbjct: 558 ELPRFQPPPPVARVTHMPRGSLPPYSSATMGAQSPAPPPNGKL 600
>Z69659-7|CAA93488.2| 571|Caenorhabditis elegans Hypothetical
protein F07C6.4c protein.
Length = 571
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +1
Query: 250 KIPCFAPPPPVCXXXXXXXXXXXXXXXXXXTNTSPASPPRSRL 378
++P F PPPPV SPA PP +L
Sbjct: 490 ELPRFQPPPPVARVTHMPRGSLPPYSSATMGAQSPAPPPNGKL 532
>Z69659-6|CAA93486.2| 639|Caenorhabditis elegans Hypothetical
protein F07C6.4b protein.
Length = 639
Score = 26.2 bits (55), Expect = 9.5
Identities = 13/43 (30%), Positives = 16/43 (37%)
Frame = +1
Query: 250 KIPCFAPPPPVCXXXXXXXXXXXXXXXXXXTNTSPASPPRSRL 378
++P F PPPPV SPA PP +L
Sbjct: 558 ELPRFQPPPPVARVTHMPRGSLPPYSSATMGAQSPAPPPNGKL 600
>U10402-2|AAA19068.2| 538|Caenorhabditis elegans Atp synthase
subunit protein 2 protein.
Length = 538
Score = 26.2 bits (55), Expect = 9.5
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = -1
Query: 189 HGQRLLFGGLGDALSTFLDLFDDDVSDGLLDGRAAG*QLVLTVSLVHGAVN 37
HG +F G+G+ DL+ + + G++D + VSLV+G +N
Sbjct: 236 HGGYSVFAGVGERTREGNDLYHEMIEGGVIDLKGKN----SKVSLVYGQMN 282
>AF016432-4|AAB65381.1| 501|Caenorhabditis elegans
Udp-glucuronosyltransferase protein64 protein.
Length = 501
Score = 26.2 bits (55), Expect = 9.5
Identities = 18/72 (25%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Frame = +1
Query: 70 NKLLARSAAVEQAVRDIIIKKIKKC-AESITEPAEEEPLPMIQLASFALHKLFSEWEGEG 246
NK +E +R+++ K + AE ++P+P + A+F +LF ++ G
Sbjct: 408 NKFHLSEQYLENHIREVVEHKSYQIQAEQFLSTFTDQPMPALDEAAFKFERLF-KYNG-- 464
Query: 247 YKIPCFAPPPPV 282
K+P F P +
Sbjct: 465 -KMPKFFYPKTI 475
>AF000198-7|AAB53052.1| 418|Caenorhabditis elegans Collagen protein
50 protein.
Length = 418
Score = 26.2 bits (55), Expect = 9.5
Identities = 17/64 (26%), Positives = 22/64 (34%)
Frame = -3
Query: 364 AGLLGLCSSAPAVAPPTGPDCVLSESDTLAAAGRSREFCIPPPPTPRTACVERRTPAGSW 185
AG + A A AP P + + G + PPP P A PA +
Sbjct: 329 AGAAPEAAPAAAAAPQPAPAPAAAAAPAGGYQGGAAAGAAAPPPAPAAAAAPEPAPAPAA 388
Query: 184 AAAP 173
A P
Sbjct: 389 APPP 392
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.133 0.413
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,243,147
Number of Sequences: 27780
Number of extensions: 193150
Number of successful extensions: 1001
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 887
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 997
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 682028672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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