Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0478
         (699 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    37   1e-04
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    37   2e-04
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    36   4e-04
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    35   7e-04
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    35   7e-04
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    27   0.15 
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    26   0.34 
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    24   1.4  
AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxida...    22   5.5  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    21   7.3  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   7.3  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   7.3  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   7.3  

>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 37.1 bits (82), Expect = 1e-04
 Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +3

Query: 381 TCNSFLNCWDGWSFEQDCPKGLMFSGDGY-CDYAENVD 491
           +C  +  CW+G + EQ C  GL+++   + CD+ ENVD
Sbjct: 111 SCTRYWTCWNGTATEQLCIGGLLYNERTHSCDWPENVD 148



 Score = 31.5 bits (68), Expect = 0.007
 Identities = 20/95 (21%), Positives = 36/95 (37%), Gaps = 2/95 (2%)
 Frame = +3

Query: 309 PKKDPAIVSNPVC-EGKRAQVQSPLTCNSFLNCWDGWSFEQDCPKGLMFSGDGY-CDYAE 482
           P+       +P+C +     V    +CN +  C  G+   Q CP  L+F      C    
Sbjct: 144 PENVDGCQKHPLCNDDPNGNVPLGKSCNRYWQCQGGYPRLQRCPAMLVFDRRSLRCVVPP 203

Query: 483 NVDCNIRTPVNLKYRNFHNRNHSPLNQRSRRSHRF 587
             DC++ + +        + ++ P N    + H F
Sbjct: 204 TEDCDVPSTIPPPPPEEDDDSNIPQNNPKNKQHNF 238



 Score = 30.3 bits (65), Expect = 0.016
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = +3

Query: 345 CEGKRAQVQSPLTCNSFLNCWDGWSFEQDCPKGLMFSG 458
           C+ K   V     C+ +  C +G     DCP GL+F+G
Sbjct: 29  CKLKSKVVGDETYCDRYWECVNGQQELYDCPNGLVFAG 66


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 36.7 bits (81), Expect = 2e-04
 Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
 Frame = +3

Query: 315  KDPAIVSNPV-CEGKRAQVQSPLTCNSFLNCWDGWSFEQDCPKGLMFSGDGYCDYAENVD 491
            ++P + +  V C+G R  V     C  +  C  G    Q CP GL ++ D +CD+ EN +
Sbjct: 2226 QEPVLPAEVVPCQG-RLFVADDTNCAQYYLCNQGQLQLQVCPNGLFWNKD-HCDWPENTE 2283

Query: 492  CN 497
            C+
Sbjct: 2284 CH 2285



 Score = 32.3 bits (70), Expect = 0.004
 Identities = 16/50 (32%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
 Frame = +3

Query: 381  TCNSFLNCWDGWSFEQDCPKGLMFSGDGY-CDYAENVDCNIRTPVNLKYR 527
            +C+SF  C +G    Q+C  GL ++ + + CD+   V C  R  +  KY+
Sbjct: 1217 SCSSFYVCVNGHLVPQNCAPGLHYNPEEHMCDWKYKVKCVGRKQLAQKYQ 1266


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 protein.
          Length = 980

 Score = 35.5 bits (78), Expect = 4e-04
 Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
 Frame = +3

Query: 264  KIEYDPLYQQELIINP--KKDPAIVSNPVCEGKRAQVQSPLTCNSFLNCWDGWSFEQDCP 437
            K+EYD  Y+  +       KDP  V+    EG  +       C  +  C         CP
Sbjct: 889  KLEYDGPYETSISSGQYTTKDPNEVTCDEEEGHISYHPDKADCRMYYMCEGERKHHMPCP 948

Query: 438  KGLMFSGD-GYCDYAENVD 491
              L+F+ D   CD+ ENV+
Sbjct: 949  SNLVFNPDQNVCDWPENVE 967


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 34.7 bits (76), Expect = 7e-04
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 330 VSNPVCEGKRAQVQSPLTCNSFLNCWDGWSFEQDCPKGLMFSGDG-YCDYAENV 488
           +S+P CE           C+ F NCW+G +    C  GL +  +   C +A+ V
Sbjct: 90  ISSPHCERLYGIFADESKCDVFWNCWNGEASRYQCSPGLAYDREARVCMWADQV 143



 Score = 29.5 bits (63), Expect = 0.028
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 402 CWDGWSFEQDCPKGLMFSGDGYCDYAENVDCNIRT 506
           C +G +F+   PK L  +    CDY  NVDC  RT
Sbjct: 54  CGNGLAFDASDPKFLTEN----CDYIHNVDCGDRT 84


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 34.7 bits (76), Expect = 7e-04
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
 Frame = +3

Query: 330 VSNPVCEGKRAQVQSPLTCNSFLNCWDGWSFEQDCPKGLMFSGDG-YCDYAENV 488
           +S+P CE           C+ F NCW+G +    C  GL +  +   C +A+ V
Sbjct: 90  ISSPHCERLYGIFADESKCDVFWNCWNGEASRYQCSPGLAYDREARVCMWADQV 143



 Score = 29.5 bits (63), Expect = 0.028
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +3

Query: 402 CWDGWSFEQDCPKGLMFSGDGYCDYAENVDCNIRT 506
           C +G +F+   PK L  +    CDY  NVDC  RT
Sbjct: 54  CGNGLAFDASDPKFLTEN----CDYIHNVDCGDRT 84


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +3

Query: 369 QSPLTCNSFLNCWDGWSFEQDCPKGLMFSGD-GYCDYAE 482
           + P  C+ F  C DG      CP GL+++   G C + +
Sbjct: 117 EEPHICDKFYYCVDGKYNMITCPNGLVYNDKAGICSWPD 155


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 25.8 bits (54), Expect = 0.34
 Identities = 11/38 (28%), Positives = 19/38 (50%)
 Frame = +3

Query: 486 VDCNIRTPVNLKYRNFHNRNHSPLNQRSRRSHRFLKQY 599
           ++ +I +P    Y +FHN  H  +       HRFL+ +
Sbjct: 347 IESSILSPNRNYYGDFHNMGHILIGYIHDPDHRFLEPF 384


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 23.8 bits (49), Expect = 1.4
 Identities = 9/13 (69%), Positives = 11/13 (84%)
 Frame = +3

Query: 300 IINPKKDPAIVSN 338
           +I+P KDPAI SN
Sbjct: 81  VIDPAKDPAIYSN 93


>AY884064-1|AAX84205.1|  683|Tribolium castaneum pro-phenol oxidase
           subunit 2 protein.
          Length = 683

 Score = 21.8 bits (44), Expect = 5.5
 Identities = 9/38 (23%), Positives = 18/38 (47%)
 Frame = +3

Query: 486 VDCNIRTPVNLKYRNFHNRNHSPLNQRSRRSHRFLKQY 599
           ++ +I +P    Y + HN  H  ++      HR L+ +
Sbjct: 347 IESSILSPNRTYYGDLHNMGHVFISYIHDPDHRHLESF 384


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +3

Query: 432 CPKGLMFSGDGYC 470
           CP G +  GDG C
Sbjct: 117 CPDGSLACGDGNC 129


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 116 LIHIYVTWLFTL 151
           LIH+Y T +FTL
Sbjct: 112 LIHVYYTVVFTL 123


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 116 LIHIYVTWLFTL 151
           LIH+Y T +FTL
Sbjct: 112 LIHVYYTVVFTL 123


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 7.3
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 116 LIHIYVTWLFTL 151
           LIH+Y T +FTL
Sbjct: 432 LIHVYYTVVFTL 443


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,873
Number of Sequences: 336
Number of extensions: 2895
Number of successful extensions: 21
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)