Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0474
         (656 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   4.5  
AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellif...    21   7.8  
AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.      21   7.8  

>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = -1

Query: 194 VLVTQTVSLANSPVFFLAIFLFTNFVSFFLR 102
           ++V  + S A    + + IFL   F+SFF R
Sbjct: 558 IIVDSSTSGATIVNYSIMIFLSAVFISFFQR 588


>AJ968562-1|CAI91546.1|  998|Apis mellifera protein ( Apis mellifera
           ORF for hypotheticalprotein. ).
          Length = 998

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/14 (57%), Positives = 10/14 (71%)
 Frame = -3

Query: 588 PFTPVILKSLSSCT 547
           PF P + KSL+S T
Sbjct: 452 PFIPAVTKSLASLT 465


>AB207270-1|BAE72137.1|  429|Apis mellifera broad-complex protein.
          Length = 429

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +3

Query: 210 PTHSSSNETIEEDEDSNTP 266
           P  +SSNE   E E ++TP
Sbjct: 274 PASASSNEHEAESEHTSTP 292


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 168,492
Number of Sequences: 438
Number of extensions: 3506
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 19734030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)