Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0471
         (694 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_05_0098 + 9148424-9148682,9148817-9148905                           30   1.5  
02_03_0285 - 17296164-17296203,17296406-17296524,17296572-172967...    28   6.1  
02_05_0488 + 29448430-29448526,29448649-29448756,29448855-294490...    28   8.1  

>10_05_0098 + 9148424-9148682,9148817-9148905
          Length = 115

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)
 Frame = +1

Query: 160 ERWREYGDGFLVLK-FTSCHHSFSFEYTYEKPHFFVSLL 273
           ERWR+   G +V + F SCH    +EY +  P   V++L
Sbjct: 52  ERWRQDAAGNVVCRRFWSCHGCLCYEYDHIVPFSKVAML 90


>02_03_0285 -
           17296164-17296203,17296406-17296524,17296572-17296742,
           17298878-17298985,17299783-17299905,17300057-17300143,
           17300765-17300884
          Length = 255

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
 Frame = +1

Query: 133 FCFIVETDGER-WREYGDGFLVLKFTSCHHSFSFEYTYEKPHFFVSLLCVLL 285
           F  I+ET+ E+ W  Y     V  F +CHHS+  +       F+  L+  L+
Sbjct: 9   FTLIMETEEEQLWWGY---LSVKHFLTCHHSYKIQCNKVFSTFYTPLIAALM 57


>02_05_0488 +
           29448430-29448526,29448649-29448756,29448855-29449000,
           29449109-29449319,29449752-29449989,29450098-29450248,
           29450353-29450682
          Length = 426

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 81  HNKVPHLKLILSVAIKCVLFHCRNGW 158
           HN +P +  IL V I C LF+C   W
Sbjct: 37  HNGMPIMVSILVVVIICTLFYCVYCW 62


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,973,561
Number of Sequences: 37544
Number of extensions: 290384
Number of successful extensions: 557
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 557
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1768474200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)