Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0469
         (446 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    24   0.75 
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    23   1.7  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    22   2.3  
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    22   2.3  
EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   3.0  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.0  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    20   9.3  
EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggeri...    20   9.3  

>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 23.8 bits (49), Expect = 0.75
 Identities = 8/29 (27%), Positives = 13/29 (44%)
 Frame = +3

Query: 348 PACRTPTRPTACAVDETPRSAVPTAPASC 434
           P C+  +   +C V+  P  A+   P  C
Sbjct: 132 PDCKDESDENSCTVETDPNRALDCDPTQC 160


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 22.6 bits (46), Expect = 1.7
 Identities = 8/29 (27%), Positives = 12/29 (41%)
 Frame = +3

Query: 348 PACRTPTRPTACAVDETPRSAVPTAPASC 434
           P C+  +   +C V+  P  A    P  C
Sbjct: 139 PDCKDESDENSCTVETDPNRAPDCDPTQC 167


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 109 HRHSNKCRL*YICIK 65
           H H + CR  YIC++
Sbjct: 172 HAHPDDCRKYYICLE 186


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 109 HRHSNKCRL*YICIK 65
           H H + CR  YIC++
Sbjct: 172 HAHPDDCRKYYICLE 186


>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 3.0
 Identities = 9/28 (32%), Positives = 14/28 (50%)
 Frame = -2

Query: 337 RPPRPRHAQNHRETRTIPIVNERKQTTH 254
           R P PR  ++H    T   +N+R +  H
Sbjct: 42  RQPYPRQKKSHPPQWTWQCINQRCERRH 69


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 7.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -2

Query: 328  RPRHAQNHRETRTIPIVNERKQTT 257
            RP    NH +T+T      R  TT
Sbjct: 1175 RPPSTTNHWQTKTTTSTTTRPTTT 1198


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 345 SPACRTPTRPTACAVDETP 401
           SP+  T T  T+ A++ TP
Sbjct: 7   SPSTTTTTTTTSSALNSTP 25


>EF222293-1|ABN79653.1|  434|Tribolium castaneum ecdysis triggering
           hormone receptorisoform A protein.
          Length = 434

 Score = 20.2 bits (40), Expect = 9.3
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +3

Query: 345 SPACRTPTRPTACAVDETP 401
           SP+  T T  T+ A++ TP
Sbjct: 7   SPSTTTTTTTTSSALNSTP 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,101
Number of Sequences: 336
Number of extensions: 1388
Number of successful extensions: 8
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10090848
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)