Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0468
         (678 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    23   2.3  
AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine 3-mon...    22   5.3  
AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.3  
AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine 3-mon...    22   5.3  

>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 23.0 bits (47), Expect = 2.3
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = -2

Query: 620 NPMSNHLKMPDSKF-KCNILFIFNCNSIYGQTKYNIPTY 507
           NPMS+HLK   S F   N  F  N      ++K +I  Y
Sbjct: 350 NPMSHHLKQEPSGFTSSNHPFSINRLLPTAESKADIKMY 388


>AY052622-1|AAL15470.1|  290|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 290

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +2

Query: 194 FS*TYVYVGSDILWDFVVQAPHTNPNQISLWSQDAYLVLAHISNSHN 334
           +S TY+  G   L       P   PN + +W +  ++++A + N  N
Sbjct: 185 YSQTYIQHGYLELVIPPENGPKMTPNHLHIWPRGQFMMIA-LPNKDN 230


>AY052393-1|AAL15467.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +2

Query: 194 FS*TYVYVGSDILWDFVVQAPHTNPNQISLWSQDAYLVLAHISNSHN 334
           +S TY+  G   L       P   PN + +W +  ++++A + N  N
Sbjct: 185 YSQTYIQHGYLELVIPPENGPKMTPNHLHIWPRGQFMMIA-LPNKDN 230


>AY052391-1|AAL15465.1|  445|Tribolium castaneum kynurenine
           3-monooxygenase protein.
          Length = 445

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 12/47 (25%), Positives = 22/47 (46%)
 Frame = +2

Query: 194 FS*TYVYVGSDILWDFVVQAPHTNPNQISLWSQDAYLVLAHISNSHN 334
           +S TY+  G   L       P   PN + +W +  ++++A + N  N
Sbjct: 185 YSQTYIQHGYLELVIPPENGPKMTPNHLHIWPRGQFMMIA-LPNKDN 230


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,418
Number of Sequences: 336
Number of extensions: 3378
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)