Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0468
         (678 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061079-1|AAL28627.1|  583|Drosophila melanogaster LD05664p pro...    29   4.4  
AF038865-1|AAD02106.2|  583|Drosophila melanogaster zinc finger ...    29   4.4  
AE014298-1996|AAN09578.1|  236|Drosophila melanogaster CG32614-P...    29   4.4  
AE014296-2326|AAF49785.1|  583|Drosophila melanogaster CG8474-PA...    29   4.4  

>AY061079-1|AAL28627.1|  583|Drosophila melanogaster LD05664p
           protein.
          Length = 583

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -2

Query: 314 ELKLNRRLVTIER-FDSGLCVAPEQQNPTRCQNLHIHRFKKTIKEHMCNKAYY 159
           +L  +RR  T ER F   LC       PT   ++H H  +K  K   C+K +Y
Sbjct: 286 QLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFY 338


>AF038865-1|AAD02106.2|  583|Drosophila melanogaster zinc finger
           motif protein protein.
          Length = 583

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -2

Query: 314 ELKLNRRLVTIER-FDSGLCVAPEQQNPTRCQNLHIHRFKKTIKEHMCNKAYY 159
           +L  +RR  T ER F   LC       PT   ++H H  +K  K   C+K +Y
Sbjct: 286 QLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFY 338


>AE014298-1996|AAN09578.1|  236|Drosophila melanogaster CG32614-PA
           protein.
          Length = 236

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 15/39 (38%), Positives = 21/39 (53%)
 Frame = -2

Query: 641 VLAPK*ENPMSNHLKMPDSKFKCNILFIFNCNSIYGQTK 525
           +LA K    +SN + MP S +K +  F  +C   YGQ K
Sbjct: 8   MLALKGAENLSNEVDMPGSSWKPSQAFTQSCAKFYGQEK 46


>AE014296-2326|AAF49785.1|  583|Drosophila melanogaster CG8474-PA
           protein.
          Length = 583

 Score = 29.5 bits (63), Expect = 4.4
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)
 Frame = -2

Query: 314 ELKLNRRLVTIER-FDSGLCVAPEQQNPTRCQNLHIHRFKKTIKEHMCNKAYY 159
           +L  +RR  T ER F   LC       PT   ++H H  +K  K   C+K +Y
Sbjct: 286 QLTTHRRRHTGERPFKCPLCPKAYTHGPTLKSHMHTHDEEKGHKCPQCDKTFY 338


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,038,612
Number of Sequences: 53049
Number of extensions: 510631
Number of successful extensions: 1278
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1256
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1278
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2951284050
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)