Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0467
         (665 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A2TX95 Cluster: Glycosyltransferase-like; n=1; Polariba...    33   4.7  
UniRef50_A0DDU0 Cluster: Chromosome undetermined scaffold_47, wh...    33   6.2  
UniRef50_UPI0000DB753A Cluster: PREDICTED: similar to CG30269-PA...    33   8.2  
UniRef50_A6R9H4 Cluster: Predicted protein; n=1; Ajellomyces cap...    33   8.2  

>UniRef50_A2TX95 Cluster: Glycosyltransferase-like; n=1;
           Polaribacter dokdonensis MED152|Rep:
           Glycosyltransferase-like - Polaribacter dokdonensis
           MED152
          Length = 368

 Score = 33.5 bits (73), Expect = 4.7
 Identities = 14/37 (37%), Positives = 23/37 (62%)
 Frame = -1

Query: 257 FNPSLIKSEFYLFSDAQSLSKIVTTIFMKVNLTKTSA 147
           FN S+++ + Y F  A SLSK++ T F K  + K ++
Sbjct: 303 FNSSVLEKDAYYFDSAVSLSKLIDTTFAKDEILKVNS 339


>UniRef50_A0DDU0 Cluster: Chromosome undetermined scaffold_47, whole
           genome shotgun sequence; n=2; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_47,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 421

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 12/34 (35%), Positives = 23/34 (67%)
 Frame = -2

Query: 142 FVVEDWFTLMLKSSIQVCVSKILLILVLLFPNDF 41
           F+ ED F L++ S ++VC   +L++L   +PN++
Sbjct: 236 FLAEDLFQLVMDSLLKVCKKYLLIVLCPCYPNEY 269


>UniRef50_UPI0000DB753A Cluster: PREDICTED: similar to CG30269-PA;
           n=1; Apis mellifera|Rep: PREDICTED: similar to
           CG30269-PA - Apis mellifera
          Length = 102

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 17/47 (36%), Positives = 21/47 (44%)
 Frame = -1

Query: 596 WCHRIISICKHHNVNTNTHLET*ACLTGFGHWCGITTRYTTDSFKSK 456
           +CH +I+       N  THL     L  FG WC +   Y  DS  SK
Sbjct: 41  YCHALINTRVETESNMKTHLFA-LLLCAFGFWCCVPCPYCIDSCLSK 86


>UniRef50_A6R9H4 Cluster: Predicted protein; n=1; Ajellomyces
           capsulatus NAm1|Rep: Predicted protein - Ajellomyces
           capsulatus NAm1
          Length = 654

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
 Frame = -2

Query: 565 IIT*IPTPTLRHEPVSRASGTGAGLQHAIPRIHSNLSIGLSRK--LKKLFLKYLHCLPRA 392
           +IT +   +L HE +  A+   A ++H +PR+   L+I LSR+   ++L ++ L CL   
Sbjct: 63  VITRLGARSLCHEGL--ATSKQANMKHFLPRLPEELAITLSRQWPCRELQIRQLACLLNP 120

Query: 391 NLPT 380
            LP+
Sbjct: 121 ALPS 124


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 624,796,826
Number of Sequences: 1657284
Number of extensions: 12225734
Number of successful extensions: 23301
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 22679
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23300
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 50826451017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)