Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0467
         (665 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster calmodulin-b...    29   5.7  
AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA...    29   5.7  
AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA ...    29   5.7  

>DQ902587-1|ABI94369.1| 2009|Drosophila melanogaster
            calmodulin-binding transcriptionactivator protein.
          Length = 2009

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -2

Query: 601  LPGVTGLSASVSIIT*IPTPTLRHEPVSRASGTGAGLQHAI 479
            +P    +S SVS  T  P PT    P S  S T + LQ  I
Sbjct: 978  IPSSVSVSISVSTSTHTPAPTSISTPTSGTSSTSSSLQSII 1018


>AE014298-854|AAF46133.1| 1399|Drosophila melanogaster CG14446-PA
           protein.
          Length = 1399

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +3

Query: 12  ITGQSLGTHEKSFGNNKTNISKILLTQT*IDDLSIKVNQSST 137
           ITG+ +GT E   G++K N+SK+++    I  L + ++  +T
Sbjct: 663 ITGRVIGTKEIRVGSDKVNLSKLIVRV--ISGLQLTISPDNT 702


>AE013599-870|AAF58934.2| 1504|Drosophila melanogaster CG8809-PA
           protein.
          Length = 1504

 Score = 29.1 bits (62), Expect = 5.7
 Identities = 16/41 (39%), Positives = 19/41 (46%)
 Frame = -2

Query: 601 LPGVTGLSASVSIIT*IPTPTLRHEPVSRASGTGAGLQHAI 479
           +P    +S SVS  T  P PT    P S  S T + LQ  I
Sbjct: 429 IPSSVSVSISVSTSTPTPAPTSISTPTSGTSSTSSSLQSII 469


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,116,190
Number of Sequences: 53049
Number of extensions: 562071
Number of successful extensions: 1083
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1042
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1083
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)