Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0467
         (665 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    24   1.5  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   2.0  
DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein pr...    22   4.6  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    22   6.0  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    22   6.0  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   6.0  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
 Frame = +3

Query: 255 KEI*DATYLIVVWANYDFRYC*MNLWYRIT--LNMSDFI 365
           KEI      ++ W N+D +Y   N W  I+  +N SD +
Sbjct: 253 KEIKGVPTYLIKWKNWDLKY---NTWEPISNLINCSDIL 288


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 11/31 (35%), Positives = 15/31 (48%)
 Frame = +1

Query: 454 YLDLNESVV*RVVIPHQCPKPVRQAHVSRWV 546
           YLD   SV    +  HQ  +   +AH+  WV
Sbjct: 577 YLDAKSSVQNYSLAKHQLKEAFVKAHLGSWV 607


>DQ011227-1|AAY63896.1|  484|Apis mellifera Amt-1-like protein
          protein.
          Length = 484

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = +3

Query: 51 GNNKTNISKILLTQT 95
          GNN+TNI+   +T+T
Sbjct: 4  GNNETNITNSSITET 18


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 474 RGIACCNPAPVPEARETGSCLKVGVGIHVMML 569
           R +A CNP     A     C+++ VG +V+ L
Sbjct: 2   RFLAICNPLLYSVAMSQRLCIQLVVGPYVIGL 33


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 11/32 (34%), Positives = 17/32 (53%)
 Frame = +3

Query: 474 RGIACCNPAPVPEARETGSCLKVGVGIHVMML 569
           R +A CNP     A     C+++ VG +V+ L
Sbjct: 1   RYLAICNPLLYSVAMSQRLCIQLVVGPYVIGL 32


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 6.0
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -2

Query: 547 TPTLRHEPVSRASGTGAGLQHAI 479
           +PTL H P        A LQ A+
Sbjct: 599 SPTLTHSPTMYGDALNANLQAAL 621


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 181,836
Number of Sequences: 438
Number of extensions: 3975
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20099475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)