Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0465
(677 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0364 - 2834446-2834742,2834838-2835197,2835281-2835562,283... 89 2e-18
10_08_0170 + 15397381-15397418,15397519-15397681,15398419-153986... 88 7e-18
08_02_0657 - 19749835-19751942,19753123-19753561 54 1e-07
03_02_0971 - 12807981-12808094,12808949-12809053,12809236-128092... 37 0.017
04_04_0394 + 24905501-24905673,24907824-24907868,24908412-249085... 36 0.039
11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,621... 33 0.21
08_02_1076 - 24151334-24152241,24152334-24152610 33 0.21
05_07_0274 - 28873531-28873644,28873727-28873981,28874111-288741... 33 0.28
01_06_0280 + 28129750-28129868,28130677-28131145,28133605-281338... 31 0.85
12_02_1104 + 26121288-26122200,26122324-26122506,26122841-26124009 30 1.5
02_03_0391 - 18471625-18472125 30 2.0
02_05_0136 + 26174965-26175849,26176965-26177030,26177124-261772... 29 2.6
02_02_0486 - 10856842-10858104 29 2.6
10_05_0075 + 8869087-8869413,8869823-8870053,8871145-8871267,887... 29 3.4
08_01_0601 - 5268520-5271112,5272448-5272950 29 3.4
07_03_1170 - 24505743-24505875,24506087-24506475,24507133-245073... 29 3.4
12_02_0001 - 12066231-12066341,12066745-12066825,12067056-120671... 29 4.5
08_02_1195 - 25149891-25151402,25152194-25152493 29 4.5
07_03_0750 - 21226896-21227011,21227116-21227370,21227469-212287... 29 4.5
06_03_0668 + 23301578-23301791,23302102-23302199,23302233-233023... 29 4.5
03_05_0617 + 26163161-26163595,26163678-26164202 29 4.5
02_01_0789 - 5919271-5919411,5920105-5920215,5920303-5920401,592... 29 4.5
02_01_0716 + 5348720-5349115 28 6.0
01_06_1406 - 37073548-37073822,37073892-37074111,37074200-370742... 28 6.0
07_03_0743 - 21118619-21119071 28 7.9
06_02_0211 - 13043968-13044646,13044752-13045037,13045903-130459... 28 7.9
05_04_0102 + 18013994-18014049,18014236-18014335,18014499-180147... 28 7.9
04_04_0545 + 26141335-26141793,26141883-26141981 28 7.9
>03_01_0364 -
2834446-2834742,2834838-2835197,2835281-2835562,
2835634-2835705,2835798-2836019,2836105-2836871,
2837206-2837434,2838027-2838189,2838313-2838350
Length = 809
Score = 89.4 bits (212), Expect = 2e-18
Identities = 41/55 (74%), Positives = 46/55 (83%)
Frame = -2
Query: 475 MDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRF 311
M+ DE D + EI AHFEE+MK+ARRSVSD DIRKY+ FAQTLQQSRGFGT FRF
Sbjct: 726 MEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGTEFRF 780
Score = 62.5 bits (145), Expect = 3e-10
Identities = 32/62 (51%), Positives = 39/62 (62%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIEAEIHREGVASS 493
I +A LRK P+AKDVDL+ +AK TQG +ICQRACK AIR+ IE +I E
Sbjct: 662 IFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIEMEKRRKD 721
Query: 492 KP 487
P
Sbjct: 722 NP 723
Score = 36.7 bits (81), Expect = 0.017
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIE 526
+LR + + + +A+DVDL +IAK T G V +C A IR+ ++
Sbjct: 386 VLRIHTKNMKLAEDVDLEHIAKDTHGYVGADLAALCTEAALQCIREKMD 434
>10_08_0170 +
15397381-15397418,15397519-15397681,15398419-15398647,
15398777-15399543,15399650-15399871,15399961-15400032,
15400100-15400408,15400491-15400850,15401199-15401492
Length = 817
Score = 87.8 bits (208), Expect = 7e-18
Identities = 40/55 (72%), Positives = 46/55 (83%)
Frame = -2
Query: 475 MDMDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRF 311
M+ DE D + EI AHFEE+MK+ARRSVSD DIRKY+ FAQTLQQSRGFG+ FRF
Sbjct: 735 MEEDEVDDIAEIKAAHFEESMKYARRSVSDADIRKYQAFAQTLQQSRGFGSEFRF 789
Score = 65.7 bits (153), Expect = 3e-11
Identities = 33/62 (53%), Positives = 41/62 (66%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIEAEIHREGVASS 493
I +A LRK P+AKDVDL+ +AK TQG +ICQRACK AIR+ IE +I RE +
Sbjct: 671 IFKACLRKSPVAKDVDLNALAKYTQGFSGADITEICQRACKYAIRENIEKDIERERRSKE 730
Query: 492 KP 487
P
Sbjct: 731 NP 732
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIE 526
+LR + + + +A+DVDL IAK T G V +C A IR+ ++
Sbjct: 386 VLRIHTKNMKLAEDVDLELIAKDTHGYVGADLAALCTEAALQCIREKMD 434
>08_02_0657 - 19749835-19751942,19753123-19753561
Length = 848
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/49 (48%), Positives = 34/49 (69%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIE 526
I RANLRK P+++ VDL +A T G ++ICQRACKLA+R+ ++
Sbjct: 668 IFRANLRKAPMSRHVDLPAMAASTDGFSGADIKEICQRACKLAVREVVQ 716
Score = 36.7 bits (81), Expect = 0.017
Identities = 16/29 (55%), Positives = 22/29 (75%)
Frame = -2
Query: 445 EISRAHFEEAMKFARRSVSDNDIRKYEMF 359
E++ HF+ AMK AR+SVS+ D+ KYE F
Sbjct: 731 ELTVDHFKSAMKHARKSVSELDVIKYEYF 759
Score = 35.9 bits (79), Expect = 0.030
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIE 526
ILR + + +P++ DVDL + K T G V +C A IR+ ++
Sbjct: 391 ILRIHTKNMPLSDDVDLERVGKDTHGFVGSDLASLCSEAAMQCIREKLD 439
>03_02_0971 -
12807981-12808094,12808949-12809053,12809236-12809295,
12809399-12809537,12809648-12809832,12809926-12810009,
12810093-12810215,12810617-12810796,12811017-12811092,
12811178-12811277,12811355-12811430,12812155-12812244,
12812342-12812449,12813583-12813651,12813751-12813921,
12814002-12814072,12814263-12814360,12814659-12814719,
12814935-12814971,12815217-12815308,12815428-12815549,
12816281-12816414
Length = 764
Score = 36.7 bits (81), Expect = 0.017
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIEAEIHREGVASS 493
IL L K +A DVDL +A +T+G + +C A L I+ +E E + +A +
Sbjct: 640 ILSVILAKEDLADDVDLEAVASLTEGYSGSDLKNLCITAAHLPIKDILEKEKKEKALAEA 699
Query: 492 K-PPLP 478
+ PLP
Sbjct: 700 ENRPLP 705
>04_04_0394 +
24905501-24905673,24907824-24907868,24908412-24908513,
24908700-24908799,24908963-24909247,24909318-24909487,
24909846-24909974,24910332-24910428,24910541-24910618,
24910694-24911017
Length = 500
Score = 35.5 bits (78), Expect = 0.039
Identities = 17/51 (33%), Positives = 30/51 (58%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIEAE 520
ILR + RK+P+ DVDL +A+ T+ +C+ A A+R+++ +E
Sbjct: 408 ILRIHTRKMPLGDDVDLWKVAERTELFTGADLEGLCREAGMAALRESLRSE 458
>11_01_0737 + 6211149-6211466,6212022-6212183,6212290-6213101,
6213188-6213395,6214157-6214364,6214752-6215206,
6215585-6216011,6216391-6216471,6216571-6216761,
6216855-6216998
Length = 1001
Score = 33.1 bits (72), Expect = 0.21
Identities = 14/49 (28%), Positives = 29/49 (59%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIE 526
I R + R +P + DV+L+ +A++T+G + +C+ A A+ + I+
Sbjct: 910 IFRIHTRNMPCSHDVNLNELARLTEGYTGADIKLVCREAAIAALDENID 958
>08_02_1076 - 24151334-24152241,24152334-24152610
Length = 394
Score = 33.1 bits (72), Expect = 0.21
Identities = 32/116 (27%), Positives = 47/116 (40%)
Frame = +2
Query: 122 CGGATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRRHPPPPGSGLVAR*STRAPCSSR 301
C G R + + + S L CP + + C G + PPP + A +R
Sbjct: 180 CRGEERSSEAEQLFSWLDT---CP--SRSVVYVCFGSMYKPPPAQAAALGAALEAS-GAR 233
Query: 302 VCWESEVGSEAAALLQGLREHLVLADVVVGHGAARELHRLLEVSAANLRNGVFLVH 469
WE VG++AA + +GL E VV G A ++ L + G FL H
Sbjct: 234 FVWE--VGADAAVVPEGLEERTAARGRVV-RGWAPQMEILRHAAV-----GAFLTH 281
>05_07_0274 -
28873531-28873644,28873727-28873981,28874111-28874179,
28874277-28874415,28874511-28875076,28875225-28875326,
28875425-28875491,28875576-28876072,28876148-28876212,
28876470-28876567,28876652-28876694,28876870-28876963,
28877325-28877360,28877454-28877542,28877667-28877788,
28878193-28878404
Length = 855
Score = 32.7 bits (71), Expect = 0.28
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIEAEIHRE 508
ILR L K +A+D+D +A +T+G + +C A +R+ ++ E +E
Sbjct: 678 ILRTLLSKEKVAEDIDYKELATMTEGYSGSDLKNLCVTAAYRPVRELLKREREKE 732
>01_06_0280 +
28129750-28129868,28130677-28131145,28133605-28133802,
28134168-28134412,28134749-28134907,28135491-28135578,
28135983-28136264
Length = 519
Score = 31.1 bits (67), Expect = 0.85
Identities = 15/56 (26%), Positives = 29/56 (51%)
Frame = -3
Query: 675 AILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIEAEIHRE 508
A++ NL+ + +A DVD+ +A+ T+G +C+ A +R+ I + E
Sbjct: 416 ALININLKTVEVATDVDIDEVARRTEGYSGDDLTNVCRDASMNGMRRKIAGKTRDE 471
>12_02_1104 + 26121288-26122200,26122324-26122506,26122841-26124009
Length = 754
Score = 30.3 bits (65), Expect = 1.5
Identities = 24/50 (48%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Frame = +1
Query: 514 MDLRLDGLANGQLAGSLAYLPSGQRH*TLRHLGDVRQVNVLSDRQF-AKV 660
+DLRL +A Q A +LAYL S T+ H GDV+ N+L D Q+ AKV
Sbjct: 529 LDLRLK-IAT-QAAEALAYLHSSTSR-TILH-GDVKSANILMDDQYNAKV 574
>02_03_0391 - 18471625-18472125
Length = 166
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 359 RADPAAEPRLRNQLQIPNKRGSYRGHGYFSGRPAHFQEEG 240
+ADPAA PR + P GS RG+G G H Q +G
Sbjct: 114 QADPAASPRCGARFGGPAAAGSGRGYG---GHGHHHQHQG 150
>02_05_0136 +
26174965-26175849,26176965-26177030,26177124-26177258,
26177369-26177434,26177516-26177701,26177777-26177863,
26177985-26178098,26178174-26178298,26178375-26178483,
26179298-26179423,26179511-26179831,26180146-26180269,
26180405-26180529
Length = 822
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = -3
Query: 654 RKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIR 538
++LP+ KDVDLS IA +T G + A LA R
Sbjct: 533 KELPLGKDVDLSDIAAMTTGFTGADLANLVNEAALLAGR 571
>02_02_0486 - 10856842-10858104
Length = 420
Score = 29.5 bits (63), Expect = 2.6
Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = -1
Query: 377 PQVRDVRADPAAEPRLRNQL-QIPNKRGSYRGHGYFSGRPAHFQEEGGDDDLYS*TVSRS 201
P + R P P L +QL Q+PN R G+ P +++GGDD Y+ V
Sbjct: 144 PLLPPARKPPDLPPNLHSQLHQVPNDARVLRP-GWML-LPEEEEDDGGDDLSYTLVVLIR 201
Query: 200 RPRGI 186
R RG+
Sbjct: 202 RGRGL 206
>10_05_0075 +
8869087-8869413,8869823-8870053,8871145-8871267,
8871873-8872091
Length = 299
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -1
Query: 581 PDGRYASEPASWPFARPSRRRSIAKESPAASRRCRYG 471
P GR A ++ P ARP RR ++ RRC YG
Sbjct: 13 PVGRAARWSSASPRARPPRRHRRHLHQASSGRRCCYG 49
>08_01_0601 - 5268520-5271112,5272448-5272950
Length = 1031
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/44 (40%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +2
Query: 365 LVLADVVVGHGAARELHR-LLEVSAANLRNGVFLVHVHNGSGGL 493
LV D G AA +H+ +L+ + A R+ FL HVH+G+ GL
Sbjct: 550 LVETDAAGGRVAAVSVHQAVLDFAQAEARDTNFL-HVHSGAAGL 592
>07_03_1170 -
24505743-24505875,24506087-24506475,24507133-24507369,
24507967-24508136,24510196-24510316
Length = 349
Score = 29.1 bits (62), Expect = 3.4
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +3
Query: 180 GGDAPRSRARHSLAVQVVVTPL 245
GGDA ++ HSL+V V+V+PL
Sbjct: 211 GGDADTTQLYHSLSVPVIVSPL 232
>12_02_0001 -
12066231-12066341,12066745-12066825,12067056-12067136,
12068017-12068097,12068337-12068417,12068492-12068572,
12068647-12068727,12070748-12070828,12070903-12070983,
12071551-12071631,12072036-12072116,12072519-12072599,
12072839-12072919,12073468-12073548,12074108-12074188,
12074428-12074508,12075076-12075156,12075396-12075476,
12075561-12075641,12076356-12076436,12076676-12076756,
12077326-12077406,12077811-12077891,12078131-12078211,
12078286-12078366,12079586-12079666,12079906-12079986,
12081341-12081421,12081793-12081873,12083074-12083154,
12083714-12083794,12084034-12084114,12084354-12084434,
12084674-12084754,12084829-12084909,12084984-12085064,
12085304-12085384,12087109-12087189,12087429-12087509,
12087584-12087664,12089204-12089284,12090339-12090419,
12090659-12090739,12091621-12091701,12092754-12092834,
12093074-12093154,12093155-12093310,12093550-12093630,
12094454-12094512,12094610-12094691,12096312-12096392,
12096789-12096869,12097768-12097907,12099296-12099377,
12100185-12100265,12100999-12101079,12101484-12101564,
12101814-12101894,12102628-12102708,12103744-12103824,
12104869-12104949,12105189-12105269,12105509-12105589,
12106322-12106402,12106477-12106557,12107448-12107528,
12108050-12108145,12109578-12109584,12110097-12110293
Length = 1929
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Frame = -3
Query: 567 CQRACKLAIRQAIEAEIHREGVASSKP---PLPLWTWTR 460
C R C+ + A +HR + S PLPLW W +
Sbjct: 30 CPRRCRGGLLMAPPLPLHRAPIPSIHSLVSPLPLWLWNK 68
>08_02_1195 - 25149891-25151402,25152194-25152493
Length = 603
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/75 (28%), Positives = 31/75 (41%)
Frame = +2
Query: 197 VASETQFSCTGRRHPPPPGSGLVAR*STRAPCSSRVCWESEVGSEAAALLQGLREHLVLA 376
+A+E S + H PP + V +TR + + +E+ + AALLQG A
Sbjct: 1 MAAEATTSSSSSTHHPPHATAAVPAPATRHEIQAAIAKATELRALHAALLQGQGAAAANA 60
Query: 377 DVVVGHGAARELHRL 421
A L RL
Sbjct: 61 GSAYSRSPAASLIRL 75
>07_03_0750 -
21226896-21227011,21227116-21227370,21227469-21228785,
21228918-21228984
Length = 584
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +2
Query: 455 VFLVHVHNGSGGLLLATPSRWISASMAWRMASLQA 559
V+ V HNG GG + T + W A+ A LQA
Sbjct: 364 VYQVDFHNGGGGNVCPTKASWCVANSAVGSTRLQA 398
>06_03_0668 +
23301578-23301791,23302102-23302199,23302233-23302301,
23302674-23302961,23303045-23303208,23303344-23303599,
23303706-23303816,23304109-23304195,23305916-23305985,
23306093-23306149,23306309-23306426,23307314-23307403,
23307492-23307671,23307816-23307893,23308016-23308088
Length = 650
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQ 535
IL+ + RK+ + + +DL IA+ G+ + +C A A+R+
Sbjct: 368 ILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 413
>03_05_0617 + 26163161-26163595,26163678-26164202
Length = 319
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = +2
Query: 242 PPPGSGLVAR*STRAPCSSRVCWESEVGSEAAALLQGL--REHLV--LADVVVGHGAARE 409
PPP + S R PC E VG A++ GL E LV V VG G R+
Sbjct: 12 PPPIQPAESMFSPRQPCFGAAAGEVVVGGAGGAVMAGLCQEEQLVQGYRQVFVGGGGVRQ 71
>02_01_0789 -
5919271-5919411,5920105-5920215,5920303-5920401,
5920486-5920642,5920774-5920937,5921017-5921079,
5921153-5921377,5922038-5922135,5923283-5923499
Length = 424
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/46 (28%), Positives = 25/46 (54%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQ 535
IL+ + RK+ + + +DL IA+ G+ + +C A A+R+
Sbjct: 346 ILKIHSRKMNLMRGIDLKKIAEKMNGASGAELKAVCTEAGMFALRE 391
>02_01_0716 + 5348720-5349115
Length = 131
Score = 28.3 bits (60), Expect = 6.0
Identities = 22/71 (30%), Positives = 28/71 (39%)
Frame = +2
Query: 89 T*TGRGQAPCWCGGATRRTNRQDVSSGLSRWWRCPEVASETQFSCTGRRHPPPPGSGLVA 268
T TG+G P W G A R R + A+ + T PPP SG +
Sbjct: 15 TGTGKGTTPAWVGKAAPNLRR-------VRQPPRSKTATAASLTWTSMVPTPPPLSGAAS 67
Query: 269 R*STRAPCSSR 301
T AP +SR
Sbjct: 68 SGPTYAPSTSR 78
>01_06_1406 -
37073548-37073822,37073892-37074111,37074200-37074246,
37074404-37074576,37075161-37075238,37075751-37075813,
37075889-37075961,37076150-37076189,37076302-37076368,
37076719-37078472,37079128-37079230,37080041-37080078,
37080221-37080347,37081944-37082152
Length = 1088
Score = 28.3 bits (60), Expect = 6.0
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +1
Query: 193 RGRERDTV*LYRSSSPPSSWKWAGRPLKYPCPL 291
RGR R T+ PS + GRP KYP P+
Sbjct: 218 RGRPRKTITTSDDHLEPSVKRPRGRPRKYPLPI 250
>07_03_0743 - 21118619-21119071
Length = 150
Score = 27.9 bits (59), Expect = 7.9
Identities = 15/44 (34%), Positives = 18/44 (40%)
Frame = +2
Query: 179 WWRCPEVASETQFSCTGRRHPPPPGSGLVAR*STRAPCSSRVCW 310
W RC + A SC P P G+ R R S+R CW
Sbjct: 59 WGRCGDGAGSCSASC-----PRPAVLGMARRRKARPAASARWCW 97
>06_02_0211 -
13043968-13044646,13044752-13045037,13045903-13045979,
13046039-13046139,13046348-13046412,13048296-13048581
Length = 497
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -1
Query: 365 DVRADPAAEPRLRNQLQIPNKRGSYRGHGYFSGRPAHFQEEGGD 234
D+ ADP A N L RG RG GY G + + GD
Sbjct: 441 DLYADPYAGRGRPNNLDDVRGRGRGRGRGYIPGGATYLGKGRGD 484
>05_04_0102 +
18013994-18014049,18014236-18014335,18014499-18014783,
18014854-18015023,18015382-18015510,18016109-18016205,
18016318-18016395,18016474-18016635,18016673-18016771
Length = 391
Score = 27.9 bits (59), Expect = 7.9
Identities = 12/25 (48%), Positives = 18/25 (72%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQ 598
ILR + RK+P+ DVDL +A+ T+
Sbjct: 320 ILRIHTRKMPLGDDVDLWKVAERTE 344
>04_04_0545 + 26141335-26141793,26141883-26141981
Length = 185
Score = 27.9 bits (59), Expect = 7.9
Identities = 16/56 (28%), Positives = 29/56 (51%)
Frame = +2
Query: 299 RVCWESEVGSEAAALLQGLREHLVLADVVVGHGAARELHRLLEVSAANLRNGVFLV 466
R+ + G EA A+++ +LV ++ + REL L SAANL+ ++ +
Sbjct: 73 RITVPEQSGEEAEAVVKLHARNLVRVKGLIDARSWRELQAALRSSAANLKQDLYAI 128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,415,952
Number of Sequences: 37544
Number of extensions: 488319
Number of successful extensions: 1789
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1721
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1789
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1726796312
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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