Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0465
(677 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical pr... 107 9e-24
Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical pr... 106 1e-23
Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical p... 106 1e-23
U58750-2|AAB00642.1| 615|Caenorhabditis elegans Polo kinase pro... 29 4.0
AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical ... 29 4.0
AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival... 29 4.0
AF059024-1|AAC14425.1| 615|Caenorhabditis elegans polo-like kin... 29 4.0
Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical pr... 28 7.0
AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical ... 28 7.0
AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome re... 28 7.0
AF045639-5|AAC02569.2| 937|Caenorhabditis elegans Osmotic avoid... 27 9.3
AF031408-1|AAB87064.1| 937|Caenorhabditis elegans olfactory cha... 27 9.3
AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical ... 27 9.3
>Z49886-1|CAA90050.1| 809|Caenorhabditis elegans Hypothetical
protein C06A1.1 protein.
Length = 809
Score = 107 bits (256), Expect = 9e-24
Identities = 58/98 (59%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = -2
Query: 595 FSGADLTE--DMPASLQAGHSPGHRGGDPXXXXXXXXXXXAVMDMDEEDPVPEISRAHFE 422
FSGADLTE L S +M+ D DPVPEI+RAHFE
Sbjct: 689 FSGADLTEICQRACKLAIRESIEKEIRIEKERQDRQARGEELMEDDAVDPVPEITRAHFE 748
Query: 421 EAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP 308
EAMKFARRSV+DNDIRKYEMFAQTLQQSRGFG NF+FP
Sbjct: 749 EAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 786
Score = 64.9 bits (151), Expect = 5e-11
Identities = 31/55 (56%), Positives = 42/55 (76%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIEAEIHRE 508
IL+A+LRK P++KD+DL+++AK T G +ICQRACKLAIR++IE EI E
Sbjct: 663 ILKASLRKTPLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRESIEKEIRIE 717
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/49 (34%), Positives = 24/49 (48%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIE 526
ILR + + + +A DVDL IA G V +C A IR+ +E
Sbjct: 386 ILRIHTKNMKLADDVDLEQIANECHGFVGADLASLCSEAALQQIREKME 434
>Z48334-9|CAA88314.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 106 bits (255), Expect = 1e-23
Identities = 57/98 (58%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = -2
Query: 595 FSGADLTE--DMPASLQAGHSPGHRGGDPXXXXXXXXXXXAVMDMDEEDPVPEISRAHFE 422
FSGADLTE L S +M+ + DPVPEI+RAHFE
Sbjct: 687 FSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFE 746
Query: 421 EAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP 308
EAMKFARRSV+DNDIRKYEMFAQTLQQSRGFG NF+FP
Sbjct: 747 EAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 784
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIEAEIHRE 508
I +A+LRK P++ D+DL+++AK T G +ICQRACKLAIR++IE EI +E
Sbjct: 661 IFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQE 715
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIE 526
ILR + + + + +DVDL +A G V +C A IR+ +E
Sbjct: 385 ILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKME 433
>Z48045-12|CAA88105.1| 810|Caenorhabditis elegans Hypothetical
protein C41C4.8 protein.
Length = 810
Score = 106 bits (255), Expect = 1e-23
Identities = 57/98 (58%), Positives = 63/98 (64%), Gaps = 2/98 (2%)
Frame = -2
Query: 595 FSGADLTE--DMPASLQAGHSPGHRGGDPXXXXXXXXXXXAVMDMDEEDPVPEISRAHFE 422
FSGADLTE L S +M+ + DPVPEI+RAHFE
Sbjct: 687 FSGADLTEICQRACKLAIRESIEREIRQEKERQDRSARGEELMEDELADPVPEITRAHFE 746
Query: 421 EAMKFARRSVSDNDIRKYEMFAQTLQQSRGFGTNFRFP 308
EAMKFARRSV+DNDIRKYEMFAQTLQQSRGFG NF+FP
Sbjct: 747 EAMKFARRSVTDNDIRKYEMFAQTLQQSRGFGNNFKFP 784
Score = 62.5 bits (145), Expect = 3e-10
Identities = 29/55 (52%), Positives = 41/55 (74%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIEAEIHRE 508
I +A+LRK P++ D+DL+++AK T G +ICQRACKLAIR++IE EI +E
Sbjct: 661 IFKASLRKTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRESIEREIRQE 715
Score = 31.1 bits (67), Expect = 0.76
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIE 526
ILR + + + + +DVDL +A G V +C A IR+ +E
Sbjct: 385 ILRIHTKNMKLGEDVDLEQVANECHGFVGADLASLCSEAAIQQIREKME 433
>U58750-2|AAB00642.1| 615|Caenorhabditis elegans Polo kinase
protein 3 protein.
Length = 615
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 398 LRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 270
LR R Q ++ + P P + + +Q+P ++G++ G G F+
Sbjct: 5 LRTRGNSAQDKNKKHVPNVPPIIYDDMQVPYEKGAFLGEGGFA 47
>AL117203-4|CAB55106.2| 813|Caenorhabditis elegans Hypothetical
protein Y48C3A.7 protein.
Length = 813
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 469 MDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKYE 365
++ ++ V + HF EA R SV++ D +KYE
Sbjct: 763 LENDESVKGVGMRHFREAASRIRPSVTEADRKKYE 797
>AF059715-1|AAF05624.1| 813|Caenorhabditis elegans cell survival
CED-4-interactingprotein MAC-1 protein.
Length = 813
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -2
Query: 469 MDEEDPVPEISRAHFEEAMKFARRSVSDNDIRKYE 365
++ ++ V + HF EA R SV++ D +KYE
Sbjct: 763 LENDESVKGVGMRHFREAASRIRPSVTEADRKKYE 797
>AF059024-1|AAC14425.1| 615|Caenorhabditis elegans polo-like kinase
protein.
Length = 615
Score = 28.7 bits (61), Expect = 4.0
Identities = 12/43 (27%), Positives = 24/43 (55%)
Frame = -1
Query: 398 LRVRQRHPQVRDVRADPAAEPRLRNQLQIPNKRGSYRGHGYFS 270
LR R Q ++ + P P + + +Q+P ++G++ G G F+
Sbjct: 5 LRTRGNSAQDKNKKHVPNVPPIIYDDMQVPYEKGAFLGEGGFA 47
>Z73424-7|CAA97783.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 326 NQLQIPNKRGSYRGHGYFSGRPAHFQE 246
N + P +RG +RG G GR HF +
Sbjct: 37 NDAKQPARRGGFRGRGRGRGRGGHFYQ 63
>AL023839-3|CAA19509.1| 294|Caenorhabditis elegans Hypothetical
protein Y39A1C.3 protein.
Length = 294
Score = 27.9 bits (59), Expect = 7.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Frame = -1
Query: 326 NQLQIPNKRGSYRGHGYFSGRPAHFQE 246
N + P +RG +RG G GR HF +
Sbjct: 37 NDAKQPARRGGFRGRGRGRGRGGHFYQ 63
>AF067618-3|AAC19196.1| 430|Caenorhabditis elegans Proteasome
regulatory particle,atpase-like protein 5 protein.
Length = 430
Score = 27.9 bits (59), Expect = 7.0
Identities = 13/55 (23%), Positives = 28/55 (50%)
Frame = -3
Query: 672 ILRANLRKLPIAKDVDLSYIAKVTQGSVALT*RKICQRACKLAIRQAIEAEIHRE 508
I++ + RK+ + KDV+ +A+ T + +C A +A+R+ +H +
Sbjct: 356 IMQIHSRKMNVNKDVNFEELARCTDDFNGAQCKAVCVEAGMIALRRDATEILHED 410
>AF045639-5|AAC02569.2| 937|Caenorhabditis elegans Osmotic
avoidance abnormal protein9 protein.
Length = 937
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -1
Query: 365 DVRADPAAEPRLRNQLQIPNKRGSYRGHGYFSGRPAHFQEEGGDDDLY 222
DV A L ++ NK Y+G+ Y+ P F G+ D+Y
Sbjct: 197 DVNARACGNFFLPEDFKLTNKITDYQGYAYYGEYPLAFAACFGNKDIY 244
>AF031408-1|AAB87064.1| 937|Caenorhabditis elegans olfactory
channel protein.
Length = 937
Score = 27.5 bits (58), Expect = 9.3
Identities = 14/48 (29%), Positives = 21/48 (43%)
Frame = -1
Query: 365 DVRADPAAEPRLRNQLQIPNKRGSYRGHGYFSGRPAHFQEEGGDDDLY 222
DV A L ++ NK Y+G+ Y+ P F G+ D+Y
Sbjct: 197 DVNARACGNFFLPEDFKLTNKITDYQGYAYYGEYPLAFAACFGNKDIY 244
>AF016654-1|AAB66028.1| 731|Caenorhabditis elegans Hypothetical
protein C17A2.5 protein.
Length = 731
Score = 27.5 bits (58), Expect = 9.3
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -1
Query: 128 HHTNMAPGPGRFTYAIV 78
+HT++ PGPG+F A++
Sbjct: 491 NHTSLEPGPGKFKLAVI 507
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,305,181
Number of Sequences: 27780
Number of extensions: 324397
Number of successful extensions: 917
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1539654388
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -