Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0464
(694 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75311-1|CAA99729.1| 1318|Homo sapiens RAD50 homologue hsRAD50 p... 117 5e-26
U63139-1|AAB07119.1| 1312|Homo sapiens Rad50 protein. 117 5e-26
AF057300-1|AAD50326.1| 1173|Homo sapiens truncated RAD50 protein... 117 5e-26
AF057299-1|AAD50325.1| 1312|Homo sapiens RAD50-2 protein protein. 117 5e-26
BX248518-8|CAM26017.1| 845|Homo sapiens ATP-binding cassette su... 34 0.55
BX248518-7|CAM26018.1| 238|Homo sapiens ATP-binding cassette su... 34 0.55
BX248518-6|CAM26016.1| 807|Homo sapiens ATP-binding cassette su... 34 0.55
BX119957-4|CAM25907.1| 845|Homo sapiens ATP-binding cassette su... 34 0.55
BX119957-3|CAM25908.1| 238|Homo sapiens ATP-binding cassette su... 34 0.55
BX119957-2|CAM25906.1| 807|Homo sapiens ATP-binding cassette su... 34 0.55
BX000357-8|CAI18562.1| 807|Homo sapiens ATP-binding cassette, s... 34 0.55
BX000357-7|CAM25770.1| 238|Homo sapiens ATP-binding cassette, s... 34 0.55
BX000357-6|CAI18563.1| 845|Homo sapiens ATP-binding cassette, s... 34 0.55
BC112923-1|AAI12924.1| 845|Homo sapiens ATP-binding cassette, s... 34 0.55
BC034488-1|AAH34488.1| 845|Homo sapiens ATP-binding cassette, s... 34 0.55
BA000025-75|BAB63325.1| 807|Homo sapiens TNFalpha-inducible ATP... 34 0.55
AL662825-8|CAM25037.1| 238|Homo sapiens ATP-binding cassette, s... 34 0.55
AL662825-7|CAI17837.1| 845|Homo sapiens ATP-binding cassette, s... 34 0.55
AL662825-6|CAI17836.1| 807|Homo sapiens ATP-binding cassette, s... 34 0.55
AL662800-8|CAI18158.1| 845|Homo sapiens ATP-binding cassette, s... 34 0.55
AL662800-7|CAI18159.1| 807|Homo sapiens ATP-binding cassette, s... 34 0.55
AL662800-6|CAI18157.2| 238|Homo sapiens ATP-binding cassette, s... 34 0.55
AF027302-1|AAC70891.1| 807|Homo sapiens TNF-alpha stimulated AB... 34 0.55
AB209564-1|BAD92801.1| 593|Homo sapiens ATP-binding cassette, s... 34 0.55
AB202093-1|BAE78612.1| 807|Homo sapiens ATP-binding cassette, s... 34 0.55
AB103602-1|BAF31263.1| 807|Homo sapiens ABC50 protein protein. 34 0.55
AB088096-1|BAC54928.1| 807|Homo sapiens ATP-binding cassette, s... 34 0.55
BC043423-1|AAH43423.1| 301|Homo sapiens ABCB6 protein protein. 33 1.3
BC000559-1|AAH00559.1| 842|Homo sapiens ATP-binding cassette, s... 33 1.3
AK172812-1|BAD18782.1| 571|Homo sapiens protein ( Homo sapiens ... 33 1.3
AK057026-1|BAB71347.1| 766|Homo sapiens protein ( Homo sapiens ... 33 1.3
AJ289233-1|CAB95766.2| 842|Homo sapiens ABC transporter umat pr... 33 1.3
AF308472-1|AAG33617.1| 896|Homo sapiens ATP-binding cassette ha... 33 1.3
AF076775-1|AAF75107.1| 842|Homo sapiens MT-ABC transporter prot... 33 1.3
AF070598-1|AAC28653.1| 511|Homo sapiens ABC transporter protein. 33 1.3
AB039371-1|BAA96733.1| 842|Homo sapiens mitochondrial ABC trans... 33 1.3
BC113657-1|AAI13658.1| 673|Homo sapiens ATP-binding cassette, s... 30 6.8
AF351824-1|AAK84663.1| 672|Homo sapiens sterolin-2 protein. 30 6.8
AF324494-1|AAK84078.1| 673|Homo sapiens sterolin-2 protein. 30 6.8
AF320294-1|AAG40004.1| 673|Homo sapiens ABCG8 protein. 30 6.8
AC108476-2|AAY24011.1| 673|Homo sapiens unknown protein. 30 6.8
>Z75311-1|CAA99729.1| 1318|Homo sapiens RAD50 homologue hsRAD50
protein.
Length = 1318
Score = 117 bits (281), Expect = 5e-26
Identities = 57/89 (64%), Positives = 67/89 (75%)
Frame = -1
Query: 505 KNGVEIDMRGRCSAGQKVLACLIIRLALAETFSSRFGILALDEPTTNLDQENIHSLCAAL 326
K +DMRGRCSAGQKVLA LIIRLALAETF GI+ALDEPTTNLD+ENI SL AL
Sbjct: 1196 KGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHAL 1255
Query: 325 GEIVQERMMQKNFMFIIITHDKEL*SHLG 239
EI++ R Q+NF ++ITHD++ LG
Sbjct: 1256 VEIIKSRSQQRNFQLLVITHDEDFVELLG 1284
Score = 59.7 bits (138), Expect = 1e-08
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -2
Query: 672 LWSFIERKWKISNMIIRELWRKIYRGNDIDYIEIKTEG--NLTVESERRKYDYRVVHLK 502
+ F K + N IIR+LWR YRG DI+YIEI+++ N++ +RR Y+YRVV LK
Sbjct: 1138 IMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLK 1196
>U63139-1|AAB07119.1| 1312|Homo sapiens Rad50 protein.
Length = 1312
Score = 117 bits (281), Expect = 5e-26
Identities = 57/89 (64%), Positives = 67/89 (75%)
Frame = -1
Query: 505 KNGVEIDMRGRCSAGQKVLACLIIRLALAETFSSRFGILALDEPTTNLDQENIHSLCAAL 326
K +DMRGRCSAGQKVLA LIIRLALAETF GI+ALDEPTTNLD+ENI SL AL
Sbjct: 1190 KGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHAL 1249
Query: 325 GEIVQERMMQKNFMFIIITHDKEL*SHLG 239
EI++ R Q+NF ++ITHD++ LG
Sbjct: 1250 VEIIKSRSQQRNFQLLVITHDEDFVELLG 1278
Score = 59.7 bits (138), Expect = 1e-08
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -2
Query: 672 LWSFIERKWKISNMIIRELWRKIYRGNDIDYIEIKTEG--NLTVESERRKYDYRVVHLK 502
+ F K + N IIR+LWR YRG DI+YIEI+++ N++ +RR Y+YRVV LK
Sbjct: 1132 IMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLK 1190
>AF057300-1|AAD50326.1| 1173|Homo sapiens truncated RAD50 protein
protein.
Length = 1173
Score = 117 bits (281), Expect = 5e-26
Identities = 57/89 (64%), Positives = 67/89 (75%)
Frame = -1
Query: 505 KNGVEIDMRGRCSAGQKVLACLIIRLALAETFSSRFGILALDEPTTNLDQENIHSLCAAL 326
K +DMRGRCSAGQKVLA LIIRLALAETF GI+ALDEPTTNLD+ENI SL AL
Sbjct: 1051 KGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHAL 1110
Query: 325 GEIVQERMMQKNFMFIIITHDKEL*SHLG 239
EI++ R Q+NF ++ITHD++ LG
Sbjct: 1111 VEIIKSRSQQRNFQLLVITHDEDFVELLG 1139
Score = 59.7 bits (138), Expect = 1e-08
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -2
Query: 672 LWSFIERKWKISNMIIRELWRKIYRGNDIDYIEIKTEG--NLTVESERRKYDYRVVHLK 502
+ F K + N IIR+LWR YRG DI+YIEI+++ N++ +RR Y+YRVV LK
Sbjct: 993 IMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLK 1051
>AF057299-1|AAD50325.1| 1312|Homo sapiens RAD50-2 protein protein.
Length = 1312
Score = 117 bits (281), Expect = 5e-26
Identities = 57/89 (64%), Positives = 67/89 (75%)
Frame = -1
Query: 505 KNGVEIDMRGRCSAGQKVLACLIIRLALAETFSSRFGILALDEPTTNLDQENIHSLCAAL 326
K +DMRGRCSAGQKVLA LIIRLALAETF GI+ALDEPTTNLD+ENI SL AL
Sbjct: 1190 KGDTALDMRGRCSAGQKVLASLIIRLALAETFCLNCGIIALDEPTTNLDRENIESLAHAL 1249
Query: 325 GEIVQERMMQKNFMFIIITHDKEL*SHLG 239
EI++ R Q+NF ++ITHD++ LG
Sbjct: 1250 VEIIKSRSQQRNFQLLVITHDEDFVELLG 1278
Score = 59.7 bits (138), Expect = 1e-08
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Frame = -2
Query: 672 LWSFIERKWKISNMIIRELWRKIYRGNDIDYIEIKTEG--NLTVESERRKYDYRVVHLK 502
+ F K + N IIR+LWR YRG DI+YIEI+++ N++ +RR Y+YRVV LK
Sbjct: 1132 IMKFHSMKMEEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLK 1190
>BX248518-8|CAM26017.1| 845|Homo sapiens ATP-binding cassette
sub-family F (GCN20) member 1 protein.
Length = 845
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 750 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 801
>BX248518-7|CAM26018.1| 238|Homo sapiens ATP-binding cassette
sub-family F (GCN20) member 1 protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 143 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 194
>BX248518-6|CAM26016.1| 807|Homo sapiens ATP-binding cassette
sub-family F (GCN20) member 1 protein.
Length = 807
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 712 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 763
>BX119957-4|CAM25907.1| 845|Homo sapiens ATP-binding cassette
sub-family F (GCN20) member 1 protein.
Length = 845
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 750 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 801
>BX119957-3|CAM25908.1| 238|Homo sapiens ATP-binding cassette
sub-family F (GCN20) member 1 protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 143 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 194
>BX119957-2|CAM25906.1| 807|Homo sapiens ATP-binding cassette
sub-family F (GCN20) member 1 protein.
Length = 807
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 712 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 763
>BX000357-8|CAI18562.1| 807|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 807
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 712 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 763
>BX000357-7|CAM25770.1| 238|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 143 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 194
>BX000357-6|CAI18563.1| 845|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 845
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 750 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 801
>BC112923-1|AAI12924.1| 845|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 845
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 750 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 801
>BC034488-1|AAH34488.1| 845|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 845
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 750 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 801
>BA000025-75|BAB63325.1| 807|Homo sapiens TNFalpha-inducible
ATP-binding protein protein.
Length = 807
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 712 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 763
>AL662825-8|CAM25037.1| 238|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 143 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 194
>AL662825-7|CAI17837.1| 845|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 845
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 750 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 801
>AL662825-6|CAI17836.1| 807|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 807
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 712 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 763
>AL662800-8|CAI18158.1| 845|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 845
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 750 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 801
>AL662800-7|CAI18159.1| 807|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 807
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 712 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 763
>AL662800-6|CAI18157.2| 238|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 238
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 143 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 194
>AF027302-1|AAC70891.1| 807|Homo sapiens TNF-alpha stimulated ABC
protein protein.
Length = 807
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 712 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 763
>AB209564-1|BAD92801.1| 593|Homo sapiens ATP-binding cassette,
sub-family F, member 1 variant protein.
Length = 593
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 498 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 549
>AB202093-1|BAE78612.1| 807|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 807
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 712 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 763
>AB103602-1|BAF31263.1| 807|Homo sapiens ABC50 protein protein.
Length = 807
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 712 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 763
>AB088096-1|BAC54928.1| 807|Homo sapiens ATP-binding cassette,
sub-family F (GCN20), member 1 protein.
Length = 807
Score = 33.9 bits (74), Expect = 0.55
Identities = 24/60 (40%), Positives = 32/60 (53%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQERMMQKNFMFIIITHDKEL 254
R+ AE +L LDEPT NLD E+I ALGE + E K + I+++HD L
Sbjct: 712 RVVFAELACREPDVLILDEPTNNLDIESID----ALGEAINE---YKGAV-IVVSHDARL 763
>BC043423-1|AAH43423.1| 301|Homo sapiens ABCB6 protein protein.
Length = 301
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQER 305
R+A+A T GI+ LDE T+ LD N ++ A+L ++ R
Sbjct: 193 RVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 235
>BC000559-1|AAH00559.1| 842|Homo sapiens ATP-binding cassette,
sub-family B (MDR/TAP), member 6 protein.
Length = 842
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQER 305
R+A+A T GI+ LDE T+ LD N ++ A+L ++ R
Sbjct: 734 RVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 776
>AK172812-1|BAD18782.1| 571|Homo sapiens protein ( Homo sapiens
cDNA FLJ23973 fis, clone HEP18305, highly similar to
ATP-binding cassette, sub-family B, member 6,
mitochondrial precursor. ).
Length = 571
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQER 305
R+A+A T GI+ LDE T+ LD N ++ A+L ++ R
Sbjct: 463 RVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 505
>AK057026-1|BAB71347.1| 766|Homo sapiens protein ( Homo sapiens
cDNA FLJ32464 fis, clone SKNMC1000251, highly similar to
Homo sapiens MT-ABC transporter (MTABC) mRNA. ).
Length = 766
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQER 305
R+A+A T GI+ LDE T+ LD N ++ A+L ++ R
Sbjct: 658 RVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 700
>AJ289233-1|CAB95766.2| 842|Homo sapiens ABC transporter umat
protein.
Length = 842
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQER 305
R+A+A T GI+ LDE T+ LD N ++ A+L ++ R
Sbjct: 734 RVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 776
>AF308472-1|AAG33617.1| 896|Homo sapiens ATP-binding cassette
half-transporter protein.
Length = 896
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQER 305
R+A+A T GI+ LDE T+ LD N ++ A+L ++ R
Sbjct: 788 RVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 830
>AF076775-1|AAF75107.1| 842|Homo sapiens MT-ABC transporter
protein.
Length = 842
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQER 305
R+A+A T GI+ LDE T+ LD N ++ A+L ++ R
Sbjct: 734 RVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 776
>AF070598-1|AAC28653.1| 511|Homo sapiens ABC transporter protein.
Length = 511
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQER 305
R+A+A T GI+ LDE T+ LD N ++ A+L ++ R
Sbjct: 403 RVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 445
>AB039371-1|BAA96733.1| 842|Homo sapiens mitochondrial ABC
transporter 3 protein.
Length = 842
Score = 32.7 bits (71), Expect = 1.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = -1
Query: 433 RLALAETFSSRFGILALDEPTTNLDQENIHSLCAALGEIVQER 305
R+A+A T GI+ LDE T+ LD N ++ A+L ++ R
Sbjct: 734 RVAIARTILKAPGIILLDEATSALDTSNERAIQASLAKVCANR 776
>BC113657-1|AAI13658.1| 673|Homo sapiens ATP-binding cassette,
sub-family G (WHITE), member 8 (sterolin 2) protein.
Length = 673
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 397 GILALDEPTTNLDQENIHSLCAALGEIVQ 311
GIL LDEPT+ LD H+L L + +
Sbjct: 232 GILILDEPTSGLDSFTAHNLVKTLSRLAK 260
>AF351824-1|AAK84663.1| 672|Homo sapiens sterolin-2 protein.
Length = 672
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 397 GILALDEPTTNLDQENIHSLCAALGEIVQ 311
GIL LDEPT+ LD H+L L + +
Sbjct: 232 GILILDEPTSGLDSFTAHNLVKTLSRLAK 260
>AF324494-1|AAK84078.1| 673|Homo sapiens sterolin-2 protein.
Length = 673
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 397 GILALDEPTTNLDQENIHSLCAALGEIVQ 311
GIL LDEPT+ LD H+L L + +
Sbjct: 232 GILILDEPTSGLDSFTAHNLVKTLSRLAK 260
>AF320294-1|AAG40004.1| 673|Homo sapiens ABCG8 protein.
Length = 673
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 397 GILALDEPTTNLDQENIHSLCAALGEIVQ 311
GIL LDEPT+ LD H+L L + +
Sbjct: 232 GILILDEPTSGLDSFTAHNLVKTLSRLAK 260
>AC108476-2|AAY24011.1| 673|Homo sapiens unknown protein.
Length = 673
Score = 30.3 bits (65), Expect = 6.8
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 397 GILALDEPTTNLDQENIHSLCAALGEIVQ 311
GIL LDEPT+ LD H+L L + +
Sbjct: 232 GILILDEPTSGLDSFTAHNLVKTLSRLAK 260
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,976,073
Number of Sequences: 237096
Number of extensions: 2001296
Number of successful extensions: 6923
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 6756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6919
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7951235188
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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