Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0463
         (658 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein pr...    25   1.6  
AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.       25   1.6  
AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.       25   1.6  
AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.       25   1.6  
EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calc...    24   4.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   4.9  
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   4.9  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          23   6.4  
AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase...    23   6.4  
AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.       23   8.5  

>AF387862-2|AAL56548.1|  942|Anopheles gambiae pol polyprotein
           protein.
          Length = 942

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 314 DRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRICYLTSSEISDD 448
           D  D V     S+ E S    + +  +  TDS +C  T+ +  DD
Sbjct: 333 DFDDDVGDRLESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDD 377


>AF387858-1|AAL58708.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 314 DRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRICYLTSSEISDD 448
           D  D V     S+ E S    + +  +  TDS +C  T+ +  DD
Sbjct: 103 DFDDDVGDRLESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDD 147


>AF387857-1|AAL58707.1|  215|Anopheles gambiae integrase protein.
          Length = 215

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 314 DRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRICYLTSSEISDD 448
           D  D V     S+ E S    + +  +  TDS +C  T+ +  DD
Sbjct: 109 DFDDDVGDRLESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDD 153


>AF387850-1|AAL58705.1|  209|Anopheles gambiae integrase protein.
          Length = 209

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 13/45 (28%), Positives = 20/45 (44%)
 Frame = +2

Query: 314 DRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRICYLTSSEISDD 448
           D  D V     S+ E S    + +  +  TDS +C  T+ +  DD
Sbjct: 103 DFDDDVGDRLESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDD 147


>EF990671-1|ABS30732.1| 1256|Anopheles gambiae voltage-gated calcium
            channel alpha2-delta subunit 1 protein.
          Length = 1256

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 13/50 (26%), Positives = 27/50 (54%)
 Frame = -1

Query: 403  GTVDGSLLHDPVARRLPVTCVFGAHTVLPIKHTPLFEAVRSVAPIAGVVE 254
            GT+  SL+ D + RR+P+    G  +     +T   E ++ V P++ +++
Sbjct: 981  GTIMDSLVQDRIYRRVPLMDYQGICSDRDNPYTGAGEPLKPVRPMSWLLQ 1030


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
            methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 11/27 (40%), Positives = 15/27 (55%)
 Frame = +3

Query: 21   DRGYLSDHNTRDRVRDRDQGYLSDHQS 101
            D+  L+   T   +RDR  GY S H+S
Sbjct: 965  DQSLLTMETTTTIIRDRVSGYSSLHES 991


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 4.9
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = -2

Query: 210 GGGPAVQRRASRPSVYTRPRG 148
           GG P    +  RP+ Y RP G
Sbjct: 306 GGAPGGPPQGMRPNFYNRPMG 326


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = +3

Query: 30  YLSDHNTRDRVRDRDQ 77
           ++ +H+ RDR RDRD+
Sbjct: 577 FVVEHSRRDRDRDRDR 592


>AY280612-1|AAQ21365.1|  309|Anopheles gambiae carbonic anhydrase
           protein.
          Length = 309

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 13/24 (54%), Positives = 16/24 (66%), Gaps = 5/24 (20%)
 Frame = +3

Query: 213 SPWDSLPS-----LRHEGSSTTPA 269
           SP++ LPS      R+EGS TTPA
Sbjct: 197 SPYNLLPSNRTSFYRYEGSLTTPA 220


>AY135184-1|AAN17505.1| 1009|Anopheles gambiae laccase 1 protein.
          Length = 1009

 Score = 23.0 bits (47), Expect = 8.5
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 540 NRSIFQLHRRSQEGRIPKR 596
           N +I  + R  +EGR+P+R
Sbjct: 886 NTTIEDIRRMDEEGRLPRR 904


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 683,436
Number of Sequences: 2352
Number of extensions: 14220
Number of successful extensions: 62
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 62
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 65232180
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)