Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0463
(658 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ973606-1|CAJ00549.1| 264|Homo sapiens polyglutamine binding p... 33 0.68
BC012358-1|AAH12358.1| 265|Homo sapiens polyglutamine binding p... 32 2.1
AJ973600-1|CAJ00544.1| 224|Homo sapiens polyglutamine binding p... 32 2.1
AJ973599-1|CAJ00543.1| 224|Homo sapiens polyglutamine binding p... 32 2.1
AJ973597-1|CAJ00541.1| 257|Homo sapiens polyglutamine binding p... 32 2.1
AJ973595-1|CAJ00539.1| 217|Homo sapiens polyglutamine binding p... 32 2.1
AJ973594-1|CAJ00538.1| 258|Homo sapiens polyglutamine binding p... 32 2.1
AJ242829-1|CAB44309.1| 265|Homo sapiens PQBP-1 protein protein. 32 2.1
AJ005893-1|CAA06750.1| 265|Homo sapiens JM26 protein. 32 2.1
AF124728-1|AAD56726.1| 614|Homo sapiens acinusS' protein. 32 2.1
AF124727-1|AAD56725.1| 583|Homo sapiens acinusS protein. 32 2.1
AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein. 32 2.1
AB041835-1|BAB16708.1| 224|Homo sapiens PQBP-1b/c protein. 32 2.1
AB041834-1|BAB16707.1| 224|Homo sapiens PQBP-1b/c protein. 32 2.1
AB041832-3|BAB16704.1| 224|Homo sapiens PQBP-1b/c protein. 32 2.1
AB041832-1|BAB16702.1| 265|Homo sapiens PQBP-1 protein. 32 2.1
AB016533-1|BAA76400.1| 265|Homo sapiens nuclear protein contain... 32 2.1
AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein. 32 2.1
AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homo... 31 2.7
U25341-1|AAC50612.1| 362|Homo sapiens Mel1b-melatonin receptor ... 31 3.6
BC069163-1|AAH69163.1| 362|Homo sapiens melatonin receptor 1B p... 31 3.6
AY521019-1|AAS00461.1| 362|Homo sapiens melatonin receptor 1B p... 31 3.6
AB033598-1|BAA92315.1| 362|Homo sapiens melatonin 1b receptor p... 31 3.6
Z84466-2|CAI42462.1| 705|Homo sapiens synapsin I protein. 31 4.8
Z84466-1|CAI42461.1| 669|Homo sapiens synapsin I protein. 31 4.8
M58378-2|AAC41931.1| 670|Homo sapiens synapsin Ib protein. 31 4.8
M58378-1|AAC41930.1| 705|Homo sapiens synapsin I protein. 31 4.8
AL009172-2|CAI42446.1| 705|Homo sapiens synapsin I protein. 31 4.8
AL009172-1|CAI42445.1| 669|Homo sapiens synapsin I protein. 31 4.8
AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein pr... 30 6.3
AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type c... 30 6.3
AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type c... 30 6.3
AL389875-2|CAO03392.1| 1794|Homo sapiens fer-1-like 4 (C. elegan... 30 6.3
AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type c... 30 6.3
AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type c... 30 6.3
AL121586-1|CAB89410.2| 1794|Homo sapiens fer-1-like 4 (C. elegan... 30 6.3
AL109827-5|CAI20117.2| 1794|Homo sapiens fer-1-like 4 (C. elegan... 30 6.3
AB083068-1|BAB88692.1| 947|Homo sapiens AMAP-1 protein. 30 6.3
AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein. 30 6.3
BC104723-1|AAI04724.2| 526|Homo sapiens Rho guanine nucleotide ... 30 8.3
BC099715-1|AAH99715.1| 324|Homo sapiens ARHGEF3 protein protein. 30 8.3
BC098272-1|AAH98272.2| 526|Homo sapiens Rho guanine nucleotide ... 30 8.3
BC098122-1|AAH98122.2| 526|Homo sapiens Rho guanine nucleotide ... 30 8.3
BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein. 30 8.3
BC068513-1|AAH68513.1| 576|Homo sapiens ARHGEF3 protein protein. 30 8.3
BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein. 30 8.3
BC054345-1|AAH54345.2| 526|Homo sapiens Rho guanine nucleotide ... 30 8.3
AK024340-1|BAB14891.1| 412|Homo sapiens protein ( Homo sapiens ... 30 8.3
AF433662-1|AAP97313.1| 558|Homo sapiens RhoGEF protein protein. 30 8.3
AF249744-1|AAF79954.1| 526|Homo sapiens RhoGEF protein. 30 8.3
AB209661-1|BAD92898.1| 537|Homo sapiens Rho guanine nucleotide ... 30 8.3
>AJ973606-1|CAJ00549.1| 264|Homo sapiens polyglutamine binding
protein variant 14 protein.
Length = 264
Score = 33.5 bits (73), Expect = 0.68
Identities = 14/27 (51%), Positives = 18/27 (66%)
Frame = +3
Query: 3 ERERERDRGYLSDHNTRDRVRDRDQGY 83
+R+RER G + RDR RDRD+GY
Sbjct: 139 DRDRERGYGKVDRERERDRERDRDRGY 165
>BC012358-1|AAH12358.1| 265|Homo sapiens polyglutamine binding
protein 1 protein.
Length = 265
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 139 DRDRERGYDKVDRERERDRERDRDRGY 165
>AJ973600-1|CAJ00544.1| 224|Homo sapiens polyglutamine binding
protein variant 8 protein.
Length = 224
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 139 DRDRERGYDKVDRERERDRERDRDRGY 165
>AJ973599-1|CAJ00543.1| 224|Homo sapiens polyglutamine binding
protein variant 7 protein.
Length = 224
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 139 DRDRERGYDKVDRERERDRERDRDRGY 165
>AJ973597-1|CAJ00541.1| 257|Homo sapiens polyglutamine binding
protein variant 5 protein.
Length = 257
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 132 DRDRERGYDKVDRERERDRERDRDRGY 158
>AJ973595-1|CAJ00539.1| 217|Homo sapiens polyglutamine binding
protein variant 3 protein.
Length = 217
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 132 DRDRERGYDKVDRERERDRERDRDRGY 158
>AJ973594-1|CAJ00538.1| 258|Homo sapiens polyglutamine binding
protein variant 2 protein.
Length = 258
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 132 DRDRERGYDKVDRERERDRERDRDRGY 158
>AJ242829-1|CAB44309.1| 265|Homo sapiens PQBP-1 protein protein.
Length = 265
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 139 DRDRERGYDKVDRERERDRERDRDRGY 165
>AJ005893-1|CAA06750.1| 265|Homo sapiens JM26 protein.
Length = 265
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 139 DRDRERGYDKVDRERERDRERDRDRGY 165
>AF124728-1|AAD56726.1| 614|Homo sapiens acinusS' protein.
Length = 614
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 3 ERERERDRGYLSDHNTRDRVRDRDQGYLSDHQSS 104
ERERERDRG RDR RDR++G D + +
Sbjct: 565 ERERERDRG----DRDRDRERDRERGRERDRRDT 594
>AF124727-1|AAD56725.1| 583|Homo sapiens acinusS protein.
Length = 583
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 3 ERERERDRGYLSDHNTRDRVRDRDQGYLSDHQSS 104
ERERERDRG RDR RDR++G D + +
Sbjct: 534 ERERERDRG----DRDRDRERDRERGRERDRRDT 563
>AF124726-1|AAD56724.1| 1341|Homo sapiens acinusL protein.
Length = 1341
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 3 ERERERDRGYLSDHNTRDRVRDRDQGYLSDHQSS 104
ERERERDRG RDR RDR++G D + +
Sbjct: 1292 ERERERDRG----DRDRDRERDRERGRERDRRDT 1321
>AB041835-1|BAB16708.1| 224|Homo sapiens PQBP-1b/c protein.
Length = 224
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 139 DRDRERGYDKVDRERERDRERDRDRGY 165
>AB041834-1|BAB16707.1| 224|Homo sapiens PQBP-1b/c protein.
Length = 224
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 139 DRDRERGYDKVDRERERDRERDRDRGY 165
>AB041832-3|BAB16704.1| 224|Homo sapiens PQBP-1b/c protein.
Length = 224
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 139 DRDRERGYDKVDRERERDRERDRDRGY 165
>AB041832-1|BAB16702.1| 265|Homo sapiens PQBP-1 protein.
Length = 265
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 139 DRDRERGYDKVDRERERDRERDRDRGY 165
>AB016533-1|BAA76400.1| 265|Homo sapiens nuclear protein containing
a WW domain (Npw38) protein.
Length = 265
Score = 31.9 bits (69), Expect = 2.1
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 2/27 (7%)
Frame = +3
Query: 9 ERERDRGY--LSDHNTRDRVRDRDQGY 83
+R+R+RGY + RDR RDRD+GY
Sbjct: 139 DRDRERGYDKVDRERERDRERDRDRGY 165
>AB014570-1|BAA31645.2| 1286|Homo sapiens KIAA0670 protein protein.
Length = 1286
Score = 31.9 bits (69), Expect = 2.1
Identities = 17/34 (50%), Positives = 21/34 (61%)
Frame = +3
Query: 3 ERERERDRGYLSDHNTRDRVRDRDQGYLSDHQSS 104
ERERERDRG RDR RDR++G D + +
Sbjct: 1237 ERERERDRG----DRDRDRERDRERGRERDRRDT 1266
>AB209257-1|BAD92494.1| 1116|Homo sapiens suppressor of Ty 5 homolog
variant protein.
Length = 1116
Score = 31.5 bits (68), Expect = 2.7
Identities = 22/93 (23%), Positives = 39/93 (41%)
Frame = +2
Query: 221 GLTAQSPTRGQFNDSGYRSNRADSFEQRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDS 400
G + ++ RG D G R + S +QR + D +D S ++ + +S R ++A +D
Sbjct: 5 GTSGETEARGGAQDCGTRQDCCLSQQQRKMSDSED---SNFSEEEDSERSSDGEEAEVDE 61
Query: 401 TDSRICYLTSSEISDDDRMSLTTAVSDEEDPGE 499
E +D+ DEE+ E
Sbjct: 62 ERRSAAGSEKEEEPEDEEEEEEEEEYDEEEEEE 94
>U25341-1|AAC50612.1| 362|Homo sapiens Mel1b-melatonin receptor
protein.
Length = 362
Score = 31.1 bits (67), Expect = 3.6
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 255 NCPRVGDWAVSPRASGGGPAVQRRASRP 172
NC G WAV P SG G A R RP
Sbjct: 9 NCCEAGGWAVRPGWSGAGSARPSRTPRP 36
>BC069163-1|AAH69163.1| 362|Homo sapiens melatonin receptor 1B
protein.
Length = 362
Score = 31.1 bits (67), Expect = 3.6
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 255 NCPRVGDWAVSPRASGGGPAVQRRASRP 172
NC G WAV P SG G A R RP
Sbjct: 9 NCCEAGGWAVRPGWSGAGSARPSRTPRP 36
>AY521019-1|AAS00461.1| 362|Homo sapiens melatonin receptor 1B
protein.
Length = 362
Score = 31.1 bits (67), Expect = 3.6
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 255 NCPRVGDWAVSPRASGGGPAVQRRASRP 172
NC G WAV P SG G A R RP
Sbjct: 9 NCCEAGGWAVRPGWSGAGSARPSRTPRP 36
>AB033598-1|BAA92315.1| 362|Homo sapiens melatonin 1b receptor
protein.
Length = 362
Score = 31.1 bits (67), Expect = 3.6
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -2
Query: 255 NCPRVGDWAVSPRASGGGPAVQRRASRP 172
NC G WAV P SG G A R RP
Sbjct: 9 NCCEAGGWAVRPGWSGAGSARPSRTPRP 36
>Z84466-2|CAI42462.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 222 PRASGGGPAVQRRASRPSVYTRPRGPTRQ 136
P+ASG P Q+R P P GPTRQ
Sbjct: 575 PKASGAPPGGQQRQGPPQKPPGPAGPTRQ 603
>Z84466-1|CAI42461.1| 669|Homo sapiens synapsin I protein.
Length = 669
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 222 PRASGGGPAVQRRASRPSVYTRPRGPTRQ 136
P+ASG P Q+R P P GPTRQ
Sbjct: 575 PKASGAPPGGQQRQGPPQKPPGPAGPTRQ 603
>M58378-2|AAC41931.1| 670|Homo sapiens synapsin Ib protein.
Length = 670
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 222 PRASGGGPAVQRRASRPSVYTRPRGPTRQ 136
P+ASG P Q+R P P GPTRQ
Sbjct: 575 PKASGAPPGGQQRQGPPQKPPGPAGPTRQ 603
>M58378-1|AAC41930.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 222 PRASGGGPAVQRRASRPSVYTRPRGPTRQ 136
P+ASG P Q+R P P GPTRQ
Sbjct: 575 PKASGAPPGGQQRQGPPQKPPGPAGPTRQ 603
>AL009172-2|CAI42446.1| 705|Homo sapiens synapsin I protein.
Length = 705
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 222 PRASGGGPAVQRRASRPSVYTRPRGPTRQ 136
P+ASG P Q+R P P GPTRQ
Sbjct: 575 PKASGAPPGGQQRQGPPQKPPGPAGPTRQ 603
>AL009172-1|CAI42445.1| 669|Homo sapiens synapsin I protein.
Length = 669
Score = 30.7 bits (66), Expect = 4.8
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 222 PRASGGGPAVQRRASRPSVYTRPRGPTRQ 136
P+ASG P Q+R P P GPTRQ
Sbjct: 575 PKASGAPPGGQQRQGPPQKPPGPAGPTRQ 603
>AY283618-1|AAP37483.1| 1564|Homo sapiens hypothetical protein
protein.
Length = 1564
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 9 ERERDRGYLSDHNTRDRVRDRDQGYLSDHQSSFVSTSRC-ASCIGESAR 152
+RER+R +SD RDR RDRD+ + S S S RC A GE R
Sbjct: 1356 DRERER-LISDSVERDRDRDRDRTFES---SQIESVKRCEAKLEGEHER 1400
>AL445232-2|CAI16506.2| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 9 ERERDRGYLSDHNTRDRVRDRDQGYLSDHQSSFVSTSRC-ASCIGESAR 152
+RER+R +SD RDR RDRD+ + S S S RC A GE R
Sbjct: 1356 DRERER-LISDSVERDRDRDRDRTFES---SQIESVKRCEAKLEGEHER 1400
>AL445232-1|CAI16505.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 9 ERERDRGYLSDHNTRDRVRDRDQGYLSDHQSSFVSTSRC-ASCIGESAR 152
+RER+R +SD RDR RDRD+ + S S S RC A GE R
Sbjct: 1356 DRERER-LISDSVERDRDRDRDRTFES---SQIESVKRCEAKLEGEHER 1400
>AL389875-2|CAO03392.1| 1794|Homo sapiens fer-1-like 4 (C. elegans)
protein.
Length = 1794
Score = 30.3 bits (65), Expect = 6.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 170 LGRLARRCTAG-PPPLALGLTAQSPTRGQFNDSGYRSNRADSFEQRGVFDRQDSVRSE 340
LG+ A+ CT+ PP L +A P+ +D Y RA ++ RGV DS S+
Sbjct: 726 LGKQAKACTSELPPDLLPEPSAGLPSSLHRDDFSYFQLRAHLYQARGVLAADDSGLSD 783
>AL157758-3|CAM13064.1| 1564|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1564
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 9 ERERDRGYLSDHNTRDRVRDRDQGYLSDHQSSFVSTSRC-ASCIGESAR 152
+RER+R +SD RDR RDRD+ + S S S RC A GE R
Sbjct: 1356 DRERER-LISDSVERDRDRDRDRTFES---SQIESVKRCEAKLEGEHER 1400
>AL157758-2|CAI10903.1| 1668|Homo sapiens zinc finger CCCH-type
containing 13 protein.
Length = 1668
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 9 ERERDRGYLSDHNTRDRVRDRDQGYLSDHQSSFVSTSRC-ASCIGESAR 152
+RER+R +SD RDR RDRD+ + S S S RC A GE R
Sbjct: 1356 DRERER-LISDSVERDRDRDRDRTFES---SQIESVKRCEAKLEGEHER 1400
>AL121586-1|CAB89410.2| 1794|Homo sapiens fer-1-like 4 (C. elegans)
protein.
Length = 1794
Score = 30.3 bits (65), Expect = 6.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 170 LGRLARRCTAG-PPPLALGLTAQSPTRGQFNDSGYRSNRADSFEQRGVFDRQDSVRSE 340
LG+ A+ CT+ PP L +A P+ +D Y RA ++ RGV DS S+
Sbjct: 726 LGKQAKACTSELPPDLLPEPSAGLPSSLHRDDFSYFQLRAHLYQARGVLAADDSGLSD 783
>AL109827-5|CAI20117.2| 1794|Homo sapiens fer-1-like 4 (C. elegans)
protein.
Length = 1794
Score = 30.3 bits (65), Expect = 6.3
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 1/58 (1%)
Frame = +2
Query: 170 LGRLARRCTAG-PPPLALGLTAQSPTRGQFNDSGYRSNRADSFEQRGVFDRQDSVRSE 340
LG+ A+ CT+ PP L +A P+ +D Y RA ++ RGV DS S+
Sbjct: 726 LGKQAKACTSELPPDLLPEPSAGLPSSLHRDDFSYFQLRAHLYQARGVLAADDSGLSD 783
>AB083068-1|BAB88692.1| 947|Homo sapiens AMAP-1 protein.
Length = 947
Score = 30.3 bits (65), Expect = 6.3
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -2
Query: 498 SPGSSSSDTAVVNDIRSSSDISLDV 424
S GSSS DTA + + SSSD+S+ +
Sbjct: 378 SQGSSSEDTAYLGTLASSSDVSMPI 402
>AB020660-1|BAA74876.1| 967|Homo sapiens KIAA0853 protein protein.
Length = 967
Score = 30.3 bits (65), Expect = 6.3
Identities = 22/49 (44%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Frame = +3
Query: 9 ERERDRGYLSDHNTRDRVRDRDQGYLSDHQSSFVSTSRC-ASCIGESAR 152
+RER+R +SD RDR RDRD+ + S S S RC A GE R
Sbjct: 655 DRERER-LISDSVERDRDRDRDRTFES---SQIESVKRCEAKLEGEHER 699
>BC104723-1|AAI04724.2| 526|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 3 protein.
Length = 526
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 299 QRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRI-CYLTSSEIS-DDDRMSLTTA 472
Q GV D + S + T RE G + +D +DS C + +SE+S D +RM T +
Sbjct: 457 QAGVLDSEGSFLNPTTGSRELQ--GETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDS 514
Query: 473 VSDEEDPGES 502
GES
Sbjct: 515 SCGNSRHGES 524
>BC099715-1|AAH99715.1| 324|Homo sapiens ARHGEF3 protein protein.
Length = 324
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 299 QRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRI-CYLTSSEIS-DDDRMSLTTA 472
Q GV D + S + T RE G + +D +DS C + +SE+S D +RM T +
Sbjct: 255 QAGVLDSEGSFLNPTTGSRELQ--GETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDS 312
Query: 473 VSDEEDPGES 502
GES
Sbjct: 313 SCGNSRHGES 322
>BC098272-1|AAH98272.2| 526|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 3 protein.
Length = 526
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 299 QRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRI-CYLTSSEIS-DDDRMSLTTA 472
Q GV D + S + T RE G + +D +DS C + +SE+S D +RM T +
Sbjct: 457 QAGVLDSEGSFLNPTTGSRELQ--GETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDS 514
Query: 473 VSDEEDPGES 502
GES
Sbjct: 515 SCGNSRHGES 524
>BC098122-1|AAH98122.2| 526|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 3 protein.
Length = 526
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 299 QRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRI-CYLTSSEIS-DDDRMSLTTA 472
Q GV D + S + T RE G + +D +DS C + +SE+S D +RM T +
Sbjct: 457 QAGVLDSEGSFLNPTTGSRELQ--GETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDS 514
Query: 473 VSDEEDPGES 502
GES
Sbjct: 515 SCGNSRHGES 524
>BC068551-1|AAH68551.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 222 PRASGGGPAVQRRASRPSVYTRPRGPTRQ 136
PRAS P VQR S Y P GP R+
Sbjct: 40 PRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>BC068513-1|AAH68513.1| 576|Homo sapiens ARHGEF3 protein protein.
Length = 576
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 299 QRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRI-CYLTSSEIS-DDDRMSLTTA 472
Q GV D + S + T RE G + +D +DS C + +SE+S D +RM T +
Sbjct: 507 QAGVLDSEGSFLNPTTGSRELQ--GETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDS 564
Query: 473 VSDEEDPGES 502
GES
Sbjct: 565 SCGNSRHGES 574
>BC059394-1|AAH59394.1| 582|Homo sapiens LYN protein protein.
Length = 582
Score = 29.9 bits (64), Expect = 8.3
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -2
Query: 222 PRASGGGPAVQRRASRPSVYTRPRGPTRQ 136
PRAS P VQR S Y P GP R+
Sbjct: 40 PRASSPSPRVQRSRPAASPYAGPAGPPRR 68
>BC054345-1|AAH54345.2| 526|Homo sapiens Rho guanine nucleotide
exchange factor (GEF) 3 protein.
Length = 526
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 299 QRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRI-CYLTSSEIS-DDDRMSLTTA 472
Q GV D + S + T RE G + +D +DS C + +SE+S D +RM T +
Sbjct: 457 QAGVLDSEGSFLNPTTGSRELQ--GETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDS 514
Query: 473 VSDEEDPGES 502
GES
Sbjct: 515 SCGNSRHGES 524
>AK024340-1|BAB14891.1| 412|Homo sapiens protein ( Homo sapiens
cDNA FLJ14278 fis, clone PLACE1005549, weakly similar to
Homo sapiens mRNA for Rho guanine nucleotide-exchange
factor, ).
Length = 412
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 299 QRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRI-CYLTSSEIS-DDDRMSLTTA 472
Q GV D + S + T RE G + +D +DS C + +SE+S D +RM T +
Sbjct: 343 QAGVLDSEGSFLNPTTGSRELQ--GETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDS 400
Query: 473 VSDEEDPGES 502
GES
Sbjct: 401 SCGNSRHGES 410
>AF433662-1|AAP97313.1| 558|Homo sapiens RhoGEF protein protein.
Length = 558
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 299 QRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRI-CYLTSSEIS-DDDRMSLTTA 472
Q GV D + S + T RE G + +D +DS C + +SE+S D +RM T +
Sbjct: 489 QAGVLDSEGSFLNPTTGSRELQ--GETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDS 546
Query: 473 VSDEEDPGES 502
GES
Sbjct: 547 SCGNSRHGES 556
>AF249744-1|AAF79954.1| 526|Homo sapiens RhoGEF protein.
Length = 526
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 299 QRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRI-CYLTSSEIS-DDDRMSLTTA 472
Q GV D + S + T RE G + +D +DS C + +SE+S D +RM T +
Sbjct: 457 QAGVLDSEGSFLNPTTGSRELQ--GETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDS 514
Query: 473 VSDEEDPGES 502
GES
Sbjct: 515 SCGNSRHGES 524
>AB209661-1|BAD92898.1| 537|Homo sapiens Rho guanine nucleotide
exchange factor 3 variant protein.
Length = 537
Score = 29.9 bits (64), Expect = 8.3
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Frame = +2
Query: 299 QRGVFDRQDSVRSEYTSDRESSRYGIVQQASIDSTDSRI-CYLTSSEIS-DDDRMSLTTA 472
Q GV D + S + T RE G + +D +DS C + +SE+S D +RM T +
Sbjct: 468 QAGVLDSEGSFLNPTTGSRELQ--GETKLEQMDQSDSESDCSMDTSEVSLDCERMEQTDS 525
Query: 473 VSDEEDPGES 502
GES
Sbjct: 526 SCGNSRHGES 535
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,377,801
Number of Sequences: 237096
Number of extensions: 1990817
Number of successful extensions: 6519
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 5838
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6469
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7366354010
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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