Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0462
(557 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyce... 54 2e-08
SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces ... 46 4e-06
SPAC144.09c |sfc2||RNA polymerase III transcription factor TFIII... 44 2e-05
SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces... 44 2e-05
SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr... 43 3e-05
SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyce... 42 6e-05
SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces pom... 42 8e-05
SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces... 41 1e-04
SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyce... 40 2e-04
SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal binuc... 36 0.003
SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|ch... 31 0.087
SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces ... 31 0.087
SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces... 31 0.15
SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces pombe... 29 0.46
SPAC6B12.08 |mug185||DNAJ domain protein Jjj family|Schizosaccha... 27 1.4
SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces pomb... 27 1.9
SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|c... 27 2.5
SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr 2... 26 3.3
SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces pomb... 26 4.3
SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces... 26 4.3
SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyce... 25 5.7
SPBC1921.01c |rpl3701|rpl37-1, rpl37|60S ribosomal protein L37|S... 25 7.5
SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces... 25 10.0
>SPAC4G8.13c |prz1||transcription factor Prz1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 681
Score = 53.6 bits (123), Expect = 2e-08
Identities = 21/56 (37%), Positives = 35/56 (62%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRS 78
HT+ + F+C +C+KSF R+ +H +H+ K F CV C ++FA+ +L H +S
Sbjct: 594 HTNYRPFQCSICKKSFARQHDKRRHEQLHTGIKAFACVTCNQRFARMDALNRHYKS 649
Score = 37.9 bits (84), Expect = 0.001
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = -1
Query: 212 CEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
C K F R +L H+ H++ + F C +C+K FA++ + H + H
Sbjct: 577 CNKRFTRAYNLKSHMNTHTNYRPFQCSICKKSFARQHDKRRHEQLH 622
Score = 27.5 bits (58), Expect = 1.4
Identities = 15/52 (28%), Positives = 18/52 (34%)
Frame = -2
Query: 487 PFSCVYCGDRFLSWEQKQRHLVESHGRPETSYTCPECTLVFQSRKLFYNHYK 332
PF C C F K+RH E ++ C C F HYK
Sbjct: 599 PFQCSICKKSFARQHDKRRH--EQLHTGIKAFACVTCNQRFARMDALNRHYK 648
>SPAC3H1.11 |hsr1||transcription factor Hsr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 582
Score = 46.0 bits (104), Expect = 4e-06
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Frame = -1
Query: 233 KTFKCHVCEKSFLRKKSLTQHL-WIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
K+F C C K F R + L +H+ +H+ K FVC+ C K+F+++ +L+ H R H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCI-CGKRFSRRDNLRQHERLH 473
Score = 39.5 bits (88), Expect = 3e-04
Identities = 15/49 (30%), Positives = 24/49 (48%)
Frame = -2
Query: 397 SYTCPECTLVFQSRKLFYNHYKVSHTDDSFMCTCCGLRFESKNRLEDHD 251
S+ CPEC+ F+ + H + HT + CG RF ++ L H+
Sbjct: 422 SFVCPECSKKFKRSEHLRRHIRSLHTSEKPFVCICGKRFSRRDNLRQHE 470
Score = 29.1 bits (62), Expect = 0.46
Identities = 12/26 (46%), Positives = 16/26 (61%)
Frame = -1
Query: 149 KRFVCVLCEKQFAQKVSLKCHMRSHH 72
K FVC C K+F + L+ H+RS H
Sbjct: 421 KSFVCPECSKKFKRSEHLRRHIRSLH 446
Score = 25.8 bits (54), Expect = 4.3
Identities = 20/81 (24%), Positives = 30/81 (37%)
Frame = -2
Query: 538 RRPKRKGNT*INKNGAWPFSCVYCGDRFLSWEQKQRHLVESHGRPETSYTCPECTLVFQS 359
R+P + + G F C C +F E +RH+ H E + C C F
Sbjct: 405 RQPSNRKTSVPRSPGGKSFVCPECSKKFKRSEHLRRHIRSLH-TSEKPFVC-ICGKRFSR 462
Query: 358 RKLFYNHYKVSHTDDSFMCTC 296
R H ++ H + S C
Sbjct: 463 RDNLRQHERL-HVNASPRLAC 482
>SPAC144.09c |sfc2||RNA polymerase III transcription factor
TFIIIA|Schizosaccharomyces pombe|chr 1|||Manual
Length = 374
Score = 43.6 bits (98), Expect = 2e-05
Identities = 32/103 (31%), Positives = 47/103 (45%), Gaps = 7/103 (6%)
Frame = -2
Query: 487 PFSCVY--CGDRFLSWEQKQRHLVESHGRPETSYTC--PECTLVFQSRKLFYNHYKVSHT 320
PFSC Y C +F + + +RH +E H +P+ Y C C F + +H HT
Sbjct: 82 PFSCHYDGCDAQFYTQQHLERH-IEVHRKPK-PYACTWEGCDECFSKHQQLRSHISACHT 139
Query: 319 D-DSFMCTC--CGLRFESKNRLEDHD*VTRTRKHSNVTSAKSP 200
+ CT C LRF +K +L++H R H + S P
Sbjct: 140 HLLPYPCTYQDCELRFATKQKLQNH----VNRAHEKIISYSCP 178
Score = 43.2 bits (97), Expect = 3e-05
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Frame = -1
Query: 236 EKTFKC--HVCEKSFLRKKSLTQHLWIHSDNKRFVC--VLCEKQFAQKVSLKCHMRSH 75
+K F C C K + R L QHL HS+ + FVC C K F +K LK H R H
Sbjct: 20 KKIFHCPYEECGKKYSRPSLLEQHLRTHSNERPFVCDYTGCSKAFYRKSHLKIHKRCH 77
Score = 39.5 bits (88), Expect = 3e-04
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 9/69 (13%)
Frame = -1
Query: 239 DEKTFKCHV--CEKSFLRKKSLTQHLW-IHSDNKRFVCVLCEKQFAQKVSLKCHM----- 84
+ KT+ C + C+KSF R +L +H+ IH N F C C +F K L+ H+
Sbjct: 232 ERKTYHCPMEGCKKSFTRSSALKKHISVIHEGNMAFHCDSCGTKFGYKHMLQRHLERGTC 291
Query: 83 -RSHHPDVN 60
++H P +N
Sbjct: 292 KKAHKPYIN 300
Score = 37.9 bits (84), Expect = 0.001
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Frame = -1
Query: 245 HTDEKTFKCHV--CEKSFLRKKSLTQHLWIHSDNKRFVCVL--CEKQFAQKVSLKCHMRS 78
H++E+ F C C K+F RK L H H++ K F C C+ QF + L+ H+
Sbjct: 47 HSNERPFVCDYTGCSKAFYRKSHLKIHKRCHTNVKPFSCHYDGCDAQFYTQQHLERHIEV 106
Query: 77 H 75
H
Sbjct: 107 H 107
Score = 37.1 bits (82), Expect = 0.002
Identities = 23/81 (28%), Positives = 35/81 (43%), Gaps = 5/81 (6%)
Frame = -2
Query: 481 SCVYCGDRFLSWEQKQRHLV--ESHGRPETSYTCPE--CTLVFQSRKLFYNHYKVSHTDD 314
SC CG +F + + H+V ++ +Y CP C F H V H +
Sbjct: 205 SCSICGRQFKTAAHLRHHVVLHQTTLEERKTYHCPMEGCKKSFTRSSALKKHISVIHEGN 264
Query: 313 -SFMCTCCGLRFESKNRLEDH 254
+F C CG +F K+ L+ H
Sbjct: 265 MAFHCDSCGTKFGYKHMLQRH 285
>SPBC1D7.02c |scr1||transcription factor Scr1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 565
Score = 43.6 bits (98), Expect = 2e-05
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -1
Query: 266 PGRPRLGHTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVL--CEKQFAQKVSLK 93
P R + +KC +C K+F R + T+H+ H+ K VC C K+F++ L
Sbjct: 13 PSRSTKNPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELT 72
Query: 92 CHMRSH 75
H R H
Sbjct: 73 RHARIH 78
Score = 28.3 bits (60), Expect = 0.81
Identities = 16/63 (25%), Positives = 23/63 (36%)
Frame = -2
Query: 505 NKNGAWPFSCVYCGDRFLSWEQKQRHLVESHGRPETSYTCPECTLVFQSRKLFYNHYKVS 326
N + P+ C C F E + RH+ G T P C F H ++
Sbjct: 19 NPDAPRPYKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRHARI- 77
Query: 325 HTD 317
HT+
Sbjct: 78 HTN 80
Score = 28.3 bits (60), Expect = 0.81
Identities = 18/66 (27%), Positives = 26/66 (39%), Gaps = 2/66 (3%)
Frame = -2
Query: 394 YTCPECTLVFQSRKLFYNHYKVSHTDDSFMCTC--CGLRFESKNRLEDHD*VTRTRKHSN 221
Y CP CT F + H + + +CT C RF + L H R H+N
Sbjct: 26 YKCPLCTKAFYRLEHQTRHIRTHTGEKPHVCTFPGCAKRFSRSDELTRH-----ARIHTN 80
Query: 220 VTSAKS 203
S ++
Sbjct: 81 ANSRRN 86
Score = 27.9 bits (59), Expect = 1.1
Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
Frame = -1
Query: 245 HTDEKTFKCHV--CEKSFLRKKSLTQHLWIHSD 153
HT EK C C K F R LT+H IH++
Sbjct: 48 HTGEKPHVCTFPGCAKRFSRSDELTRHARIHTN 80
>SPAC11D3.17 |||zinc finger protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 585
Score = 43.2 bits (97), Expect = 3e-05
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = -1
Query: 236 EKTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHHPD 66
++ F C C K F R ++LT+H HS + C CE + +K LK H++ H D
Sbjct: 28 KRVFPCDQCAKRFTRHENLTRHKACHSKAEPIPCPYCEIKCKRKDLLKRHIQRFHND 84
Score = 31.9 bits (69), Expect = 0.066
Identities = 18/58 (31%), Positives = 23/58 (39%)
Frame = -2
Query: 484 FSCVYCGDRFLSWEQKQRHLVESHGRPETSYTCPECTLVFQSRKLFYNHYKVSHTDDS 311
F C C RF E RH H + E CP C + + + L H + H D S
Sbjct: 31 FPCDQCAKRFTRHENLTRHKA-CHSKAEP-IPCPYCEIKCKRKDLLKRHIQRFHNDKS 86
>SPAC6G10.12c |ace2||transcription factor Ace2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 41.9 bits (94), Expect = 6e-05
Identities = 17/53 (32%), Positives = 31/53 (58%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCH 87
H ++ ++C +C+ F+R L +HL IH + + +VC C K+F + +L H
Sbjct: 467 HLSDRPYRCDLCKAGFVRHHDLKRHLRIHENGRPYVCE-CLKRFNRLDALNRH 518
Score = 37.1 bits (82), Expect = 0.002
Identities = 15/46 (32%), Positives = 24/46 (52%)
Frame = -1
Query: 212 CEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
C K RK ++ H+ H ++ + C LC+ F + LK H+R H
Sbjct: 450 CNKRIARKYNVESHIQTHLSDRPYRCDLCKAGFVRHHDLKRHLRIH 495
>SPAC1039.05c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 781
Score = 41.5 bits (93), Expect = 8e-05
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 227 FKCHV--CEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHHPDVN 60
+KC C KSF RK+ +H H+++K F+C C F + L H+ H N
Sbjct: 17 YKCDFQGCTKSFTRKEHARRHFRSHTNSKAFICPHCSSSFTRSDVLNRHVNQKHVKQN 74
Score = 28.3 bits (60), Expect = 0.81
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQHL 168
HT+ K F C C SF R L +H+
Sbjct: 41 HTNSKAFICPHCSSSFTRSDVLNRHV 66
>SPBC1198.04c |zas1||zinc finger protein Zas1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 897
Score = 41.1 bits (92), Expect = 1e-04
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Frame = -1
Query: 260 RPRLGHTDEKTFKCHV--CEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCH 87
R R + F C C KSF RK+ L +H H + K F C C + FA+ L H
Sbjct: 15 RSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLNRH 74
Query: 86 MRSHH 72
++ H
Sbjct: 75 VQQMH 79
Score = 29.1 bits (62), Expect = 0.46
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = -2
Query: 439 KQRHLVESHGRPETSYTCPECTLVFQSRKLFYNHYKVSHTDDSFMCTCCGLRFESKNRLE 260
K+R G P T P+C F ++ H + +F C+ C F + L
Sbjct: 13 KKRSRAHRLGDPRFYCTYPDCPKSFTRKEHLRRHERTHENVKAFSCSFCNRAFARSDVLN 72
Query: 259 DH 254
H
Sbjct: 73 RH 74
>SPBP4H10.09 |rsv1||transcription factor Rsv1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 428
Score = 40.3 bits (90), Expect = 2e-04
Identities = 17/55 (30%), Positives = 33/55 (60%), Gaps = 2/55 (3%)
Frame = -1
Query: 233 KTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVL--CEKQFAQKVSLKCHMRSH 75
K+++C C++ F R++ +H+ H+ K F C C+K+F ++ L H+R+H
Sbjct: 2 KSYECPFCKRVFHRQEHQVRHIRSHTGEKPFECSYPSCKKRFTRRDELIRHVRTH 56
Score = 29.1 bits (62), Expect = 0.46
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 3/51 (5%)
Frame = -2
Query: 397 SYTCPECTLVFQSRKLFYNHYKVSHTDDS-FMCT--CCGLRFESKNRLEDH 254
SY CP C VF ++ H + SHT + F C+ C RF ++ L H
Sbjct: 3 SYECPFCKRVFHRQEHQVRHIR-SHTGEKPFECSYPSCKKRFTRRDELIRH 52
>SPAC25B8.19c ||SPAC683.01c|transcription factor, zf-fungal
binuclear cluster type |Schizosaccharomyces pombe|chr
1|||Manual
Length = 522
Score = 36.3 bits (80), Expect = 0.003
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHLWIHSDNKRFVC--VLCEKQFAQKVSLKCHMRSH 75
++C C + F R SL H + H+ + FVC C K F + +++ H R H
Sbjct: 468 YRCTECLQGFSRPSSLKIHTYSHTGERPFVCDYAGCGKAFNVRSNMRRHQRIH 520
>SPAC144.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 249
Score = 31.5 bits (68), Expect = 0.087
Identities = 14/40 (35%), Positives = 23/40 (57%), Gaps = 2/40 (5%)
Frame = -1
Query: 185 SLTQHLWIHSDNKRFVCVL--CEKQFAQKVSLKCHMRSHH 72
+L HL H+ K F+C + C++ F + +L HMR+ H
Sbjct: 92 ALVAHLRSHTGEKPFICSVPECDRSFTRSDALAKHMRTVH 131
>SPCC550.15c |||ribosome biogenesis protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 463
Score = 31.5 bits (68), Expect = 0.087
Identities = 20/78 (25%), Positives = 30/78 (38%)
Frame = -2
Query: 487 PFSCVYCGDRFLSWEQKQRHLVESHGRPETSYTCPECTLVFQSRKLFYNHYKVSHTDDSF 308
P C++C F S++ ++H+ SH S PE + LF Y F
Sbjct: 207 PRDCLFCAASFSSFDTCKKHMKASH-----SLYIPEREYLVDEPSLF--DYLAEKISIGF 259
Query: 307 MCTCCGLRFESKNRLEDH 254
C C F+S + H
Sbjct: 260 TCLTCNREFKSLEAVRAH 277
>SPAC6F12.02 |rst2||transcription factor Rst2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 567
Score = 30.7 bits (66), Expect = 0.15
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -1
Query: 149 KRFVCVLCEKQFAQKVSLKCHMRSH 75
K++VC C + FA+ LK H+RSH
Sbjct: 68 KQYVCETCTRAFARLEHLKRHIRSH 92
Score = 24.6 bits (51), Expect = 10.0
Identities = 17/55 (30%), Positives = 24/55 (43%), Gaps = 8/55 (14%)
Frame = -2
Query: 394 YTCPECTLVFQSRKLFYNHYKVSHTDDS-FMC-------TCCGLRFESKNRLEDH 254
Y C CT F + H + SHT++ F C T CG +F ++ L H
Sbjct: 70 YVCETCTRAFARLEHLKRHIR-SHTNEKPFTCSEIDGLPTGCGRQFSRRDLLLRH 123
>SPAC19B12.07c |||human ZNF277P homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 319
Score = 29.1 bits (62), Expect = 0.46
Identities = 16/77 (20%), Positives = 36/77 (46%)
Frame = -2
Query: 334 KVSHTDDSFMCTCCGLRFESKNRLEDHD*VTRTRKHSNVTSAKSPFCVRRV*LSICGYTA 155
K+ + +SF C CC + ++K L +H ++H + S + + ++ T
Sbjct: 138 KIKNELESFRCLCCHVPCKNKKLLREH---MNNKRHFRLDPKSSEYDEFYI-INYASVTK 193
Query: 154 TINVSFAFYARNNSLRK 104
+I +S + +A N + +
Sbjct: 194 SITISHSQFAINEDINE 210
>SPAC6B12.08 |mug185||DNAJ domain protein Jjj
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 380
Score = 27.5 bits (58), Expect = 1.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = -2
Query: 307 MCTCCGLRFESKNRLEDHD*VTRTRKH 227
MC C F S+N+LE+H+ ++KH
Sbjct: 271 MCMVCNKNFRSQNQLENHE---NSKKH 294
>SPAC1B1.01 |||transcription factor Rdp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 478
Score = 27.1 bits (57), Expect = 1.9
Identities = 16/68 (23%), Positives = 29/68 (42%), Gaps = 18/68 (26%)
Frame = -1
Query: 230 TFKCHVCEKSFLRKKSLTQH------------------LWIHSDNKRFVCVLCEKQFAQK 105
TF+C C+ F+++ LT H +W ++N RF CV + + +
Sbjct: 138 TFRCDKCDMMFVKQSGLTNHKRTYHQVETVVIIGHRRYVWRRNENGRFQCVCGRQNWRRP 197
Query: 104 VSLKCHMR 81
V+ H +
Sbjct: 198 VNFASHAK 205
>SPAC23C11.16 |plo1||Polo kinase Plo1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 683
Score = 26.6 bits (56), Expect = 2.5
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +1
Query: 115 NCFSHRTQTKRLLSLCIHKC*VRLFLRRKDFSQ 213
+CF T +L LC HK + L +RK ++
Sbjct: 105 DCFEDSTNIYLILELCEHKSLMELLRKRKQLTE 137
>SPBC365.09c |||human KIN homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 304
Score = 26.2 bits (55), Expect = 3.3
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRS 78
R+ C C+KQ + KCH +S
Sbjct: 25 RWYCSACQKQMRDENGFKCHTQS 47
>SPCC594.05c |||COMPASS complex subunit |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 424
Score = 25.8 bits (54), Expect = 4.3
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 499 NGAWPFSCVYCGDRFLSWEQKQRHLVESHGRPETSYTCPECT 374
+G+W C C D F ++ ES+ Y CP+CT
Sbjct: 128 DGSWMLGCDGCEDWF---HGTCVNIPESYNDLTVQYFCPKCT 166
>SPAC16.05c |sfp1||transcription factor Sfp1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 442
Score = 25.8 bits (54), Expect = 4.3
Identities = 10/33 (30%), Positives = 17/33 (51%)
Frame = -1
Query: 155 DNKRFVCVLCEKQFAQKVSLKCHMRSHHPDVNL 57
+NK + C +C K++ LK H H V++
Sbjct: 395 ENKPYRCEVCSKRYKNLNGLKYHRTHSHLQVSM 427
>SPBP35G2.10 |mit1||SHREC complex subunit Mit1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1418
Score = 25.4 bits (53), Expect = 5.7
Identities = 8/26 (30%), Positives = 15/26 (57%)
Frame = -2
Query: 361 SRKLFYNHYKVSHTDDSFMCTCCGLR 284
S+ + N + +S D+ C CCG++
Sbjct: 1292 SKAVLDNFFLLSSLSDNVRCRCCGIK 1317
>SPBC1921.01c |rpl3701|rpl37-1, rpl37|60S ribosomal protein
L37|Schizosaccharomyces pombe|chr 2|||Manual
Length = 108
Score = 25.0 bits (52), Expect = 7.5
Identities = 9/24 (37%), Positives = 12/24 (50%)
Frame = -3
Query: 285 GSSLRTAWKTTIRSHGRENIQMSR 214
GS +R W T R HG + +R
Sbjct: 62 GSKIRVIWGTVSRPHGNSGVVRAR 85
>SPBC649.03 |rhp14||XP-A family homolog Rhp14|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 289
Score = 24.6 bits (51), Expect = 10.0
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
Frame = -2
Query: 442 QKQRHLVESHGRPETSYTCPECTLVFQSRKLF-YNHYKVSHT 320
QK+ L + PET+ C EC + K F H +V HT
Sbjct: 98 QKKLRLAPLNLDPETAPKCFECDSIELDTKYFDIFHCRVCHT 139
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,268,451
Number of Sequences: 5004
Number of extensions: 44913
Number of successful extensions: 218
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 163
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 209
length of database: 2,362,478
effective HSP length: 69
effective length of database: 2,017,202
effective search space used: 233995432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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