Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0462
(557 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 52 1e-08
CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein... 42 1e-05
AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific tran... 30 0.059
AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific tran... 28 0.24
AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless female-s... 26 0.96
AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless male-spe... 26 0.96
DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protei... 25 1.3
DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protei... 25 1.3
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript... 24 2.9
AY823259-1|AAX18444.1| 194|Anopheles gambiae pburs protein. 23 6.8
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 52.4 bits (120), Expect = 1e-08
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHH-P 69
H EK ++C C + + + L HL +H+D K + C C + F QK LK HM +H P
Sbjct: 349 HEGEKCYRCEYCPYASISMRHLESHLLLHTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNP 408
Query: 68 D 66
D
Sbjct: 409 D 409
Score = 49.6 bits (113), Expect = 7e-08
Identities = 23/57 (40%), Positives = 31/57 (54%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
HT EK F+C C + K LT+H+ IH+ K + C +C +F Q SLK H H
Sbjct: 234 HTGEKPFQCPHCTYASPDKFKLTRHMRIHTGEKPYSCDVCFARFTQSNSLKAHKMIH 290
Score = 45.2 bits (102), Expect = 1e-06
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 9/69 (13%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQHL-WIHSDN--------KRFVCVLCEKQFAQKVSLK 93
HTD+K +KC C ++F +K+ L +H+ + H+ + K +C C++ F K +L
Sbjct: 377 HTDQKPYKCDQCAQTFRQKQLLKRHMNYYHNPDYVAPTPKAKTHICPTCKRPFRHKGNLI 436
Query: 92 CHMRSHHPD 66
HM H P+
Sbjct: 437 RHMAMHDPE 445
Score = 44.8 bits (101), Expect = 2e-06
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKR--FVCVLCEKQFAQKVSLKCHMRSHH 72
HT EK + C VC F + SL H IH + F C LC +K L+ H+++ H
Sbjct: 262 HTGEKPYSCDVCFARFTQSNSLKAHKMIHQVGNKPVFQCKLCPTTCGRKTDLRIHVQNLH 321
Score = 42.3 bits (95), Expect = 1e-05
Identities = 20/60 (33%), Positives = 27/60 (45%)
Frame = -1
Query: 254 RLGHTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
R HT E+ KC C+ + + L +H+ H+ K F C C K L HMR H
Sbjct: 203 RYRHTHERPHKCTECDYASVELSKLKRHIRTHTGEKPFQCPHCTYASPDKFKLTRHMRIH 262
Score = 41.9 bits (94), Expect = 1e-05
Identities = 17/52 (32%), Positives = 31/52 (59%)
Frame = -1
Query: 230 TFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
T+ C+ C + + L++HL HS+++ CV+CE+ F SL+ H+ +H
Sbjct: 126 TYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNHVNTH 177
Score = 41.9 bits (94), Expect = 1e-05
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHH 72
H++++ KC VCE+ F SL H+ H+ K C C+ F L H+R H
Sbjct: 149 HSEDRPHKCVVCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRH 206
Score = 39.5 bits (88), Expect = 7e-05
Identities = 19/78 (24%), Positives = 30/78 (38%)
Frame = -2
Query: 487 PFSCVYCGDRFLSWEQKQRHLVESHGRPETSYTCPECTLVFQSRKLFYNHYKVSHTDDSF 308
P C C + + +RH+ G E + CP CT + H ++ + +
Sbjct: 211 PHKCTECDYASVELSKLKRHIRTHTG--EKPFQCPHCTYASPDKFKLTRHMRIHTGEKPY 268
Query: 307 MCTCCGLRFESKNRLEDH 254
C C RF N L+ H
Sbjct: 269 SCDVCFARFTQSNSLKAH 286
Score = 31.9 bits (69), Expect = 0.015
Identities = 19/81 (23%), Positives = 28/81 (34%)
Frame = -2
Query: 496 GAWPFSCVYCGDRFLSWEQKQRHLVESHGRPETSYTCPECTLVFQSRKLFYNHYKVSHTD 317
G P C +C + F + + RH+ H E + C EC H + +
Sbjct: 179 GTKPHRCKHCDNCFTTSGELIRHIRYRHTH-ERPHKCTECDYASVELSKLKRHIRTHTGE 237
Query: 316 DSFMCTCCGLRFESKNRLEDH 254
F C C K +L H
Sbjct: 238 KPFQCPHCTYASPDKFKLTRH 258
Score = 26.2 bits (55), Expect = 0.73
Identities = 12/49 (24%), Positives = 18/49 (36%)
Frame = -2
Query: 400 TSYTCPECTLVFQSRKLFYNHYKVSHTDDSFMCTCCGLRFESKNRLEDH 254
++Y C C L H K D C C F++ L++H
Sbjct: 125 STYMCNYCNYTSNKLFLLSRHLKTHSEDRPHKCVVCERGFKTLASLQNH 173
>CR954257-11|CAJ14162.1| 415|Anopheles gambiae predicted protein
protein.
Length = 415
Score = 42.3 bits (95), Expect = 1e-05
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 4/62 (6%)
Frame = -1
Query: 242 TDEKTFKCHVCEKSFLRKKSLTQHLW----IHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
++ + F+C++C+ S+ K +H + I ++N C +C K F+Q+ + HMR+
Sbjct: 344 SEGQRFQCNLCDMSYRTKLQYQKHEYEVHRISNENFGIKCTICHKLFSQRQDYQLHMRAI 403
Query: 74 HP 69
HP
Sbjct: 404 HP 405
Score = 24.6 bits (51), Expect = 2.2
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = -2
Query: 394 YTCPECTLVFQSRKLFYNH 338
Y CP C +F FYNH
Sbjct: 292 YRCPACGNLFVELTNFYNH 310
Score = 24.6 bits (51), Expect = 2.2
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = -1
Query: 164 IHSDNKRFVCVLCEKQFAQKVSLKCHMRSHH 72
I S+ +RF C LC+ + K+ + H H
Sbjct: 342 ITSEGQRFQCNLCDMSYRTKLQYQKHEYEVH 372
>AY785360-1|AAV52864.1| 759|Anopheles gambiae male-specific
transcription factor FRU-MB protein.
Length = 759
Score = 29.9 bits (64), Expect = 0.059
Identities = 15/55 (27%), Positives = 24/55 (43%)
Frame = -1
Query: 224 KCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHHPDVN 60
+C +C K + H +H RF C LC + + +L+ H + HP N
Sbjct: 501 RCKLCGKVVTH---IRNHYHVHFPG-RFECPLCRATYTRSDNLRTHCKFKHPMFN 551
>AY785361-1|AAV52865.1| 960|Anopheles gambiae male-specific
transcription factor FRU-MA protein.
Length = 960
Score = 27.9 bits (59), Expect = 0.24
Identities = 13/55 (23%), Positives = 26/55 (47%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHHPDV 63
+ C C K+ + H IH C +C ++F ++ ++K H + HP++
Sbjct: 899 YSCVSCHKTVSNR---WHHANIHRPQSH-ECPVCGQKFTRRDNMKAHCKVKHPEL 949
Score = 27.1 bits (57), Expect = 0.42
Identities = 21/67 (31%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Frame = -2
Query: 508 INKNGAWP--FSCVYCGDRFLS-WEQKQRHLVESHGRPETSYTCPECTLVFQSRKLFYNH 338
I G +P +SCV C + W H RP+ S+ CP C F R H
Sbjct: 889 IQLTGTFPTLYSCVSCHKTVSNRWHHANIH------RPQ-SHECPVCGQKFTRRDNMKAH 941
Query: 337 YKVSHTD 317
KV H +
Sbjct: 942 CKVKHPE 948
>AY725820-1|AAU50568.1| 593|Anopheles gambiae fruitless
female-specific zinc-fingerC isoform protein.
Length = 593
Score = 25.8 bits (54), Expect = 0.96
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHHPD 66
++C C K + H H+ +R +C C +++ +L+ H+R H D
Sbjct: 527 WRCRSCGKEVTNR---WHHFHSHTP-QRSLCPYCPASYSRIDTLRSHLRIKHAD 576
>AY725819-1|AAU50567.1| 569|Anopheles gambiae fruitless
male-specific zinc-fingerC isoform protein.
Length = 569
Score = 25.8 bits (54), Expect = 0.96
Identities = 13/54 (24%), Positives = 25/54 (46%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHHPD 66
++C C K + H H+ +R +C C +++ +L+ H+R H D
Sbjct: 503 WRCRSCGKEVTNR---WHHFHSHTP-QRSLCPYCPASYSRIDTLRSHLRIKHAD 552
>DQ230894-1|ABD94313.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 25.4 bits (53), Expect = 1.3
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 164 IHSDNKR--FVCVLCEKQFAQKVSLKC 90
IHSD++ F C +C + F + KC
Sbjct: 236 IHSDDEELPFKCYVCRESFVDPIVTKC 262
Score = 24.6 bits (51), Expect = 2.2
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 239 DEKTFKCHVCEKSFL 195
+E FKC+VC +SF+
Sbjct: 241 EELPFKCYVCRESFV 255
>DQ230893-1|ABD94311.1| 315|Anopheles gambiae zinc finger protein
183 protein.
Length = 315
Score = 25.4 bits (53), Expect = 1.3
Identities = 10/27 (37%), Positives = 15/27 (55%), Gaps = 2/27 (7%)
Frame = -1
Query: 164 IHSDNKR--FVCVLCEKQFAQKVSLKC 90
IHSD++ F C +C + F + KC
Sbjct: 236 IHSDDEELPFKCYVCRESFVDPIVTKC 262
Score = 24.6 bits (51), Expect = 2.2
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -1
Query: 239 DEKTFKCHVCEKSFL 195
+E FKC+VC +SF+
Sbjct: 241 EELPFKCYVCRESFV 255
>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
protein.
Length = 1201
Score = 24.2 bits (50), Expect = 2.9
Identities = 11/26 (42%), Positives = 16/26 (61%)
Frame = +2
Query: 440 LFPRQEPIAAVNTREGPSTVFVDSRV 517
LFP P++ + + P+TV DSRV
Sbjct: 463 LFPTHPPVSWPVSSDAPTTVPSDSRV 488
>AY823259-1|AAX18444.1| 194|Anopheles gambiae pburs protein.
Length = 194
Score = 23.0 bits (47), Expect = 6.8
Identities = 7/15 (46%), Positives = 12/15 (80%)
Frame = -1
Query: 224 KCHVCEKSFLRKKSL 180
+C+ C +SFLR++ L
Sbjct: 139 ECYCCRESFLRERQL 153
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 584,538
Number of Sequences: 2352
Number of extensions: 11217
Number of successful extensions: 40
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 52142868
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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