Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0462
(557 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein ... 40 0.001
At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein ... 28 0.031
At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zin... 35 0.032
At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein ... 35 0.042
At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein ... 33 0.13
At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein ... 33 0.17
At5g54360.1 68418.m06769 zinc finger (C2H2 type) family protein-... 32 0.23
At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein ... 32 0.23
At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein ... 32 0.23
At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3) ... 32 0.23
At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein ... 32 0.30
At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein ... 31 0.39
At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein ... 31 0.39
At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein ... 31 0.52
At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein ... 31 0.52
At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein ... 31 0.69
At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein ... 31 0.69
At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1... 30 0.91
At5g67420.1 68418.m08501 LOB domain protein 37 / lateral organ b... 30 0.91
At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein ... 30 0.91
At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein ... 30 0.91
At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein ... 30 0.91
At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2) ... 30 0.91
At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein ... 30 0.91
At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein ... 30 0.91
At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein ... 30 0.91
At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein ... 30 1.2
At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein ... 30 1.2
At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein ... 25 1.5
At4g37540.1 68417.m05312 LOB domain protein 39 / lateral organ b... 29 1.6
At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein ... 29 1.6
At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein ... 29 1.6
At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein ... 29 1.6
At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein ... 29 1.6
At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein ... 29 2.1
At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4) ... 29 2.1
At2g29660.1 68415.m03605 zinc finger (C2H2 type) family protein ... 29 2.1
At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein ... 29 2.1
At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein ... 29 2.1
At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2... 25 2.7
At2g46590.1 68415.m05811 Dof zinc finger protein DAG2 / Dof affe... 29 2.8
At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5) ... 29 2.8
At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein ... 29 2.8
At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein ... 29 2.8
At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein ... 29 2.8
At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein ... 28 3.7
At5g54340.1 68418.m06767 zinc finger (C2H2 type) protein-related... 28 3.7
At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3... 28 3.7
At5g37900.1 68418.m04566 seven in absentia (SINA) family protein... 28 3.7
At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein ... 28 3.7
At4g31480.1 68417.m04472 coatomer beta subunit, putative / beta-... 28 3.7
At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein ... 28 3.7
At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein ... 28 3.7
At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein ... 28 3.7
At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein ... 28 4.5
At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein ... 28 4.9
At5g40310.1 68418.m04890 exonuclease family protein contains exo... 28 4.9
At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein ... 28 4.9
At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein ... 28 4.9
At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein ... 28 4.9
At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein ... 28 4.9
At2g17600.1 68415.m02036 DC1 domain-containing protein contains ... 28 4.9
At1g65985.1 68414.m07487 expressed protein contains Pfam profile... 28 4.9
At5g55770.1 68418.m06951 DC1 domain-containing protein contains ... 27 6.4
At5g03620.1 68418.m00321 subtilase family protein contains simil... 27 6.4
At4g31490.1 68417.m04473 coatomer beta subunit, putative / beta-... 27 6.4
At3g49940.1 68416.m05461 LOB domain protein 38 / lateral organ b... 27 6.4
At3g27970.1 68416.m03491 exonuclease family protein contains exo... 27 6.4
At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related conta... 27 6.4
At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein ... 27 8.5
At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein ... 27 8.5
At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR... 27 8.5
At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein ... 27 8.5
>At4g06634.1 68417.m01050 zinc finger (C2H2 type) family protein
contains Pfam PF00096: Zinc finger, C2H2 type
Length = 387
Score = 39.5 bits (88), Expect = 0.001
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -1
Query: 212 CEKSFLRKKSLTQHLWIHSDNKRFVCVL--CEKQFAQKVSLKCHMRSH 75
C K FL L +H IH+ + ++C C K F+ +L+ HM++H
Sbjct: 115 CGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTH 162
Score = 37.9 bits (84), Expect = 0.005
Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = -1
Query: 260 RPRLGHTDEKTFKCHV--CEKSFLRKKSLTQHLWIHSDNKRFVCVL--CEKQFAQKVSLK 93
R L HT E+ + C C K+F +L H+ HS +C C K++A + LK
Sbjct: 127 RHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSGCVKRYAHEYKLK 186
Query: 92 CHMRSHH 72
H+ ++H
Sbjct: 187 NHVAAYH 193
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = -2
Query: 469 CGDRFLSWEQKQRHLVESHGRPETSYTCPECTLVFQSRKLFYNHYKVSHTDDSFMC--TC 296
CG +FL + +RH + G T C F +H K ++ +C +
Sbjct: 115 CGKKFLDSSKLKRHYLIHTGERNYICTYEGCGKAFSLDFNLRSHMKTHSQENYHICPYSG 174
Query: 295 CGLRFESKNRLEDH 254
C R+ + +L++H
Sbjct: 175 CVKRYAHEYKLKNH 188
>At1g27730.1 68414.m03389 zinc finger (C2H2 type) family protein
(ZAT10) / salt-tolerance zinc finger protein (STZ)
identical to salt-tolerance zinc finger protein
GB:CAA64820 GI:1565227 from [Arabidopsis thaliana];
contains Pfam domain, PF00096: Zinc finger, C2H2 type;
identical to cDNA zinc finger protein STZ/ZAT10
(STZ/ZAT10) GI:9965730
Length = 227
Score = 27.9 bits (59), Expect(2) = 0.031
Identities = 13/41 (31%), Positives = 23/41 (56%)
Frame = -1
Query: 272 EPPGRPRLGHTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDN 150
+PP P + ++ ++KC VC+K+F ++L H H N
Sbjct: 68 QPPPPPAV---EKLSYKCSVCDKTFSSYQALGGHKASHRKN 105
Score = 26.2 bits (55), Expect(2) = 0.031
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -1
Query: 149 KRFVCVLCEKQFAQKVSLKCHMRSHHPDVN 60
K VC +C K F +L H R H+ N
Sbjct: 134 KSHVCTICNKSFPSGQALGGHKRCHYEGNN 163
>At1g34790.1 68414.m04337 transparent testa 1 protein (TT1) / zinc
finger (C2H2 type) protein TT1 identical to transparent
testa 1 GI:18253279 from [Arabidopsis thaliana];
contains Pfam profile PF00096: Zinc finger, C2H2 type
Length = 303
Score = 35.1 bits (77), Expect = 0.032
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHLWIHSDNKR 144
F CHVC K+F R +L H+W H R
Sbjct: 145 FSCHVCFKTFNRYNNLQMHMWGHGSQYR 172
>At4g35700.1 68417.m05067 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 275
Score = 34.7 bits (76), Expect = 0.042
Identities = 17/56 (30%), Positives = 26/56 (46%)
Frame = -2
Query: 550 GRVFRRPKRKGNT*INKNGAWPFSCVYCGDRFLSWEQKQRHLVESHGRPETSYTCP 383
G V ++P++KG+T + P C CG F SW+ HL + R + P
Sbjct: 120 GEVVKKPRKKGSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKDRGYLGFLPP 175
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -1
Query: 263 GRPRLGHTDEKTFKCHVCEKSFLRKKSLTQHLWIHSD 153
G +L H + C+VC K F K++ HL H D
Sbjct: 130 GSTQLTHLPQGPPMCNVCGKGFASWKAVFGHLRQHKD 166
>At3g29340.1 68416.m03684 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 650
Score = 33.1 bits (72), Expect = 0.13
Identities = 13/36 (36%), Positives = 21/36 (58%)
Frame = -1
Query: 266 PGRPRLGHTDEKTFKCHVCEKSFLRKKSLTQHLWIH 159
P R +L ++KC +CEKSF+ ++L H +H
Sbjct: 432 PLRRKLQKKSRSSYKCSICEKSFVCSQALGSHQRLH 467
>At5g14140.1 68418.m01654 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 427
Score = 32.7 bits (71), Expect = 0.17
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Frame = -2
Query: 469 CGDRFLSWEQKQRHLVESHGRPETSYTCPECTLVFQSR-KLFYNHY-KVSHTDDSFMCTC 296
CG +F +++ + RHL++ H P T + L + R KL H K+ H +D +
Sbjct: 216 CGLKFKTYKARHRHLIDKHKFPTTFEFFKKTQLSKKRREKLQRQHVSKLKHEEDKEAASS 275
Query: 295 CGLRFESKNRLE 260
+ E K L+
Sbjct: 276 DAMEVEDKGSLD 287
>At5g54360.1 68418.m06769 zinc finger (C2H2 type) family
protein-related contains Prosite:PS00028: Zinc finger,
C2H2 type, domain.
Length = 270
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -1
Query: 203 SFLRKKSLTQHLWIHSDNK-RFVCVLCEKQFAQKVSLKCHMRSHHPDVNLEM*RSI 39
SF RKK T + DNK C C++ F +L HM+ H + LE R I
Sbjct: 60 SFFRKKRDTVLIHPPKDNKISHTCRFCKRNFKSCFALGGHMKCHKKERELEKQRKI 115
>At2g23740.1 68415.m02834 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 907
Score = 32.3 bits (70), Expect = 0.23
Identities = 20/71 (28%), Positives = 32/71 (45%), Gaps = 6/71 (8%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHL----WIHSDNKRFV--CVLCEKQFAQKVSLKCHMRSHHPD 66
F C +C SF+R+K L H+ + K + C+ C F K L H+++ HP
Sbjct: 496 FACAICLDSFVRRKLLEIHVEERHHVQFAEKCMLLQCIPCGSHFGDKEQLLVHVQAVHPS 555
Query: 65 VNLEM*RSIEC 33
+ + EC
Sbjct: 556 ECKSLTVASEC 566
>At1g72050.2 68414.m08328 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 412
Score = 32.3 bits (70), Expect = 0.23
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = -1
Query: 221 CHVCEKSFLRKKSLTQHLWIHSDNKRFVCVL--CEKQFAQKVSLKCHMRSH 75
C C F + L QH+ HS + F C + C + +K L H+ +H
Sbjct: 68 CQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRKDHLNRHLLTH 118
Score = 30.7 bits (66), Expect = 0.69
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = -1
Query: 221 CHVCEKSFLRKKSLTQHLWIHSDNK---RFVCVL--CEKQFAQKVSLKCHMRSHHPDV 63
C +C L KK++ +HL H ++ C + C F++ +L+ HM++ H D+
Sbjct: 277 CEICGSKHL-KKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDI 333
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -1
Query: 212 CEKSFLRKKSLTQHLWIHS--DNKRFVCVL--CEKQFAQKVSLKCHMRSHHPDVNLEM 51
C K+F L +H H D+ C C K F + LK H+RS H +N E+
Sbjct: 222 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEI 279
Score = 27.9 bits (59), Expect = 4.9
Identities = 15/66 (22%), Positives = 25/66 (37%), Gaps = 2/66 (3%)
Frame = -2
Query: 445 EQKQRHLVESHGRPETSYTCPECTLVFQSRKLFYNHYKVSHTDDSFMCTC--CGLRFESK 272
E++ E +++TC EC F+ H + + SF C C + K
Sbjct: 49 EERDDEACEVDEESSSNHTCQECGAEFKKPAHLKQHMQSHSLERSFTCYVDDCAASYRRK 108
Query: 271 NRLEDH 254
+ L H
Sbjct: 109 DHLNRH 114
>At1g08290.1 68414.m00915 zinc finger (C2H2 type) protein (WIP3)
identical to WIP3 protein [Arabidopsis thaliana]
gi|18027014|gb|AAL55723; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 32.3 bits (70), Expect = 0.23
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKR 144
H F C +C K+F R ++ H+W H R
Sbjct: 174 HVGPMQFACSICSKTFNRYNNMQMHMWGHGSEFR 207
>At2g37430.1 68415.m04590 zinc finger (C2H2 type) family protein
(ZAT11) contains Pfam domain, PF00096: Zinc finger, C2H2
type
Length = 178
Score = 31.9 bits (69), Expect = 0.30
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 215 VCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH-HPDVNLE 54
+ + S +++ L QH H+ N+ F C C K+F+ +L H SH P + +E
Sbjct: 24 LAQTSMVKQIGLNQHTESHTSNQ-FECKTCNKRFSSFQALGGHRASHKKPKLTVE 77
Score = 29.1 bits (62), Expect = 2.1
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -2
Query: 358 RKLFYNHYKVSHTDDSFMCTCCGLRFESKNRLEDH 254
+++ N + SHT + F C C RF S L H
Sbjct: 31 KQIGLNQHTESHTSNQFECKTCNKRFSSFQALGGH 65
>At3g48430.1 68416.m05287 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domains PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1354
Score = 31.5 bits (68), Expect = 0.39
Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 2/48 (4%)
Frame = -1
Query: 212 CEKSFLRKKSLTQHLWIHSDNKRFVCVL--CEKQFAQKVSLKCHMRSH 75
C K+F K L QH +HSD++ C C+ F S H+R H
Sbjct: 1267 CGKNFFSHKYLVQHQRVHSDDRPLKCPWKGCKMTFKWAWSRTEHIRVH 1314
Score = 29.5 bits (63), Expect = 1.6
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 245 HTDEKTFKC--HVCEKSFLRKKSLTQHLWIHSDNKRFVC 135
H+D++ KC C+ +F S T+H+ +H+ + +VC
Sbjct: 1284 HSDDRPLKCPWKGCKMTFKWAWSRTEHIRVHTGARPYVC 1322
>At1g13290.1 68414.m01543 zinc finger (C2H2 type) family protein
contains Pfam domian PF00096: Zinc finger, C2H2 type
Length = 302
Score = 31.5 bits (68), Expect = 0.39
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHLWIHSDNKR 144
F C VC K+F R ++ H+W H R
Sbjct: 101 FSCSVCNKTFNRFNNMQMHMWGHGSQYR 128
>At3g60580.1 68416.m06777 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 288
Score = 31.1 bits (67), Expect = 0.52
Identities = 12/28 (42%), Positives = 18/28 (64%)
Frame = -1
Query: 233 KTFKCHVCEKSFLRKKSLTQHLWIHSDN 150
+++KC VC KSF+ K+L H+ H N
Sbjct: 2 ESYKCRVCFKSFVNGKALGGHMRSHMSN 29
>At1g30970.1 68414.m03792 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 367
Score = 31.1 bits (67), Expect = 0.52
Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQH-LWIHSDN 150
H K FKCHVC K + H L +H +N
Sbjct: 30 HQKAKHFKCHVCHKKLSTASGMVIHVLQVHKEN 62
Score = 29.9 bits (64), Expect = 1.2
Identities = 14/52 (26%), Positives = 24/52 (46%)
Frame = -1
Query: 221 CHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHHPD 66
C+ C++ F +K L QH K F C +C K+ + + H+ H +
Sbjct: 14 CYYCDREFDDEKILVQH----QKAKHFKCHVCHKKLSTASGMVIHVLQVHKE 61
>At5g04240.1 68418.m00414 zinc finger (C2H2 type) family protein /
transcription factor jumonji (jmj) family protein
contains Pfam domians PF02375: jmjN domain, PF02373: jmjC
domain and PF00096: Zinc finger, C2H2 type
Length = 1327
Score = 30.7 bits (66), Expect = 0.69
Identities = 12/39 (30%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Frame = -1
Query: 245 HTDEKTFKCHV--CEKSFLRKKSLTQHLWIHSDNKRFVC 135
H DE+ F+C C +F + + T+HL +H+ + ++C
Sbjct: 1262 HKDERPFECSWKGCSMTFKWQWARTEHLRLHTGERPYIC 1300
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Frame = -1
Query: 212 CEKSFLRKKSLTQHLWIHSDNKRFVCVL--CEKQFAQKVSLKCHMRSH 75
C K F K L H +H D + F C C F + + H+R H
Sbjct: 1245 CGKKFRAHKYLVLHQRVHKDERPFECSWKGCSMTFKWQWARTEHLRLH 1292
>At1g72050.1 68414.m08329 zinc finger (C2H2 type) family protein
contains multiple zinc finger domains: PF00096: Zinc
finger, C2H2 type
Length = 324
Score = 30.7 bits (66), Expect = 0.69
Identities = 16/58 (27%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = -1
Query: 221 CHVCEKSFLRKKSLTQHLWIHSDNK---RFVCVL--CEKQFAQKVSLKCHMRSHHPDV 63
C +C L KK++ +HL H ++ C + C F++ +L+ HM++ H D+
Sbjct: 189 CEICGSKHL-KKNIKRHLRTHDEDSSPGEIKCEVEGCSSTFSKASNLQKHMKAVHDDI 245
Score = 29.1 bits (62), Expect = 2.1
Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = -1
Query: 212 CEKSFLRKKSLTQHLWIHS--DNKRFVCVL--CEKQFAQKVSLKCHMRSHHPDVNLEM 51
C K+F L +H H D+ C C K F + LK H+RS H +N E+
Sbjct: 134 CGKAFKYPSQLQKHQDSHVKLDSVEAFCSEPGCMKYFTNEECLKSHIRSCHQHINCEI 191
>At5g67450.1 68418.m08504 zinc finger (C2H2 type) protein 1 (AZF1)
identical to Cys2/His2-type zinc finger protein 1
[Arabidopsis thaliana] gi|6009887|dbj|BAA85108
Length = 245
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = -1
Query: 269 PPGRPRLGHTDEKTFKCHVCEKSFLRKKSLTQHLWIH 159
PP R +D + +KC VC KSF ++L H H
Sbjct: 83 PPLPSRASPSDHRDYKCTVCGKSFSSYQALGGHKTSH 119
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = -1
Query: 158 SDNKRFVCVLCEKQFAQKVSLKCHMRSHHPDVN 60
SD++ + C +C K F+ +L H SH N
Sbjct: 92 SDHRDYKCTVCGKSFSSYQALGGHKTSHRKPTN 124
>At5g67420.1 68418.m08501 LOB domain protein 37 / lateral organ
boundaries domain protein 37 (LBD37) identical to LOB
DOMAIN 37 [Arabidopsis thaliana] GI:17227170
Length = 250
Score = 30.3 bits (65), Expect = 0.91
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 334 CNGCRIVCVTETLMCILDTCTKFRDVRDSRLSAFVFV 444
CNGCR++ + CIL C ++ + D++ A VFV
Sbjct: 3 CNGCRVLRKGCSENCILRPCIQWIETADAQGHATVFV 39
>At5g66730.1 68418.m08412 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 500
Score = 30.3 bits (65), Expect = 0.91
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RFVC +C K F + +L+ H R H+
Sbjct: 60 RFVCEICNKGFQRDQNLQLHRRGHN 84
>At5g03150.1 68418.m00263 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 503
Score = 30.3 bits (65), Expect = 0.91
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RFVC +C K F + +L+ H R H+
Sbjct: 81 RFVCEICNKGFQRDQNLQLHRRGHN 105
>At4g02670.1 68417.m00362 zinc finger (C2H2 type) family protein
similar to potato PCP1 zinc finger protein, GenBank
accession number X82328 contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 402
Score = 30.3 bits (65), Expect = 0.91
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RFVC +C K F + +L+ H R H+
Sbjct: 81 RFVCEICNKGFQRDQNLQLHRRGHN 105
>At3g57670.1 68416.m06425 zinc finger (C2H2 type) protein (WIP2)
identical to WIP2 protein [Arabidopsis thaliana]
gi|18027012|gb|AAL55722; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 383
Score = 30.3 bits (65), Expect = 0.91
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHLWIHSDNKR 144
F C VC K+F R ++ H+W H R
Sbjct: 217 FSCPVCFKTFNRYNNMQMHMWGHGSQYR 244
>At3g50700.1 68416.m05547 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 452
Score = 30.3 bits (65), Expect = 0.91
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RFVC +C K F + +L+ H R H+
Sbjct: 62 RFVCEICNKGFQRDQNLQLHRRGHN 86
>At3g13810.1 68416.m01744 zinc finger (C2H2 type) family protein
similar to finger protein pcp1 GB:S48856 from [Solanum
tuberosum] contains Pfam domain, PF00096: Zinc finger,
C2H2 type
Length = 513
Score = 30.3 bits (65), Expect = 0.91
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RFVC +C K F + +L+ H R H+
Sbjct: 98 RFVCEICNKGFQRDQNLQLHRRGHN 122
>At2g02070.1 68415.m00143 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 602
Score = 30.3 bits (65), Expect = 0.91
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RF+C +C K F ++ +L+ H R H+
Sbjct: 80 RFICEVCNKGFQREQNLQLHRRGHN 104
>At3g53820.1 68416.m05946 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 142
Score = 29.9 bits (64), Expect = 1.2
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = -1
Query: 167 WIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHHPD 66
W S + ++C CE+ F+ +L HM H D
Sbjct: 13 WSGSQARPYICEFCERGFSNAQALGGHMNIHRKD 46
>At2g02080.1 68415.m00144 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 516
Score = 29.9 bits (64), Expect = 1.2
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RF+C +C K F ++ +L+ H R H+
Sbjct: 82 RFICDVCNKGFQREQNLQLHRRGHN 106
>At5g56200.1 68418.m07012 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 493
Score = 25.0 bits (52), Expect(2) = 1.5
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 137 CVLCEKQFAQKVSLKCHMRSHHPD 66
C +C K+F +L HMR HPD
Sbjct: 132 CCVCYKKFTSMKALYGHMR-FHPD 154
Score = 23.0 bits (47), Expect(2) = 1.5
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 239 DEKTFKCHVCEKSFLRKKSLTQHLWIH 159
+EK C C K F+ K+L H IH
Sbjct: 75 EEKKHICCECGKRFVSGKALGGHKRIH 101
>At4g37540.1 68417.m05312 LOB domain protein 39 / lateral organ
boundaries domain protein 39 (LBD39) identical to
SP|Q9SZE8 LOB domain protein 39 {Arabidopsis thaliana}
Length = 240
Score = 29.5 bits (63), Expect = 1.6
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +1
Query: 334 CNGCRIVCVTETLMCILDTCTKFRDVRDSRLSAFVFV 444
CNGCR++ + CIL C ++ + +S+ A VFV
Sbjct: 3 CNGCRVLRKGCSETCILRPCLQWIESAESQGHATVFV 39
>At3g45260.1 68416.m04887 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 446
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RF+C +C K F + +L+ H R H+
Sbjct: 67 RFICEVCNKGFKRDQNLQLHRRGHN 91
>At2g01940.1 68415.m00129 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 439
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/28 (35%), Positives = 19/28 (67%)
Frame = -1
Query: 161 HSDNKRFVCVLCEKQFAQKVSLKCHMRS 78
HS++K++VC C K +A + K H+++
Sbjct: 139 HSNHKQWVCERCSKGYAVQSDYKAHLKT 166
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = -1
Query: 185 SLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
SL+ + SD R++C +C + F + +L+ H R H
Sbjct: 55 SLSPRTLLESD--RYICEICNQGFQRDQNLQMHRRRH 89
>At1g55110.1 68414.m06294 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RF+C +C K F + +L+ H R H+
Sbjct: 91 RFICEVCNKGFQRDQNLQLHKRGHN 115
>At1g14580.1 68414.m01734 zinc finger (C2H2 type) family protein
similar to zinc finger protein ID1 GB:AAC18941
GI:3170601 from [Zea mays] contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 467
Score = 29.5 bits (63), Expect = 1.6
Identities = 10/25 (40%), Positives = 17/25 (68%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RF+C +C K F ++ +L+ H R H+
Sbjct: 81 RFLCEVCNKGFQREQNLQLHRRGHN 105
>At5g60470.1 68418.m07584 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 392
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RF C +C K F ++ +L+ H R H+
Sbjct: 5 RFFCEICNKGFQREQNLQLHKRGHN 29
>At3g20880.1 68416.m02640 zinc finger (C2H2 type) protein (WIP4)
identical to WIP4 protein [Arabidopsis thaliana]
gi|18376500|emb|CAC86168; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 412
Score = 29.1 bits (62), Expect = 2.1
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHLWIHSDNKR 144
F C +C K+F R ++ H+W H R
Sbjct: 256 FSCPLCFKTFNRYNNMQMHMWGHGSQYR 283
>At2g29660.1 68415.m03605 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 373
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -2
Query: 337 YKVSHTDDSFMCTCCGLRFESKNRLEDH 254
+++S +D+ F C CG F N LE+H
Sbjct: 117 FEISSSDEIFPCNSCGEIFPKINLLENH 144
>At2g26940.1 68415.m03231 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 286
Score = 29.1 bits (62), Expect = 2.1
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 149 KRFVCVLCEKQFAQKVSLKCHMRSHHPDVN 60
++ CV+CEKQF+ + H+R H + N
Sbjct: 47 RKHFCVICEKQFSSGKAYGGHVRIHSIEYN 76
>At1g68130.1 68414.m07782 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 419
Score = 29.1 bits (62), Expect = 2.1
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -1
Query: 161 HSDNKRFVCVLCEKQFAQKVSLKCHMRS 78
HS++K+++C C K +A + K H+++
Sbjct: 142 HSNHKQWICERCSKGYAVQSDYKAHLKT 169
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 185 SLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
SL+ + SD R+VC +C + F + +L+ H R H
Sbjct: 58 SLSPRTLLESD--RYVCEICNQGFQRDQNLQMHRRRH 92
>At3g19580.1 68416.m02483 zinc finger (C2H2 type) protein 2 (AZF2)
identical to Cys2/His2-type zinc finger protein 2
[Arabidopsis thaliana] gi|6009885|dbj|BAA85107
Length = 273
Score = 25.4 bits (53), Expect(2) = 2.7
Identities = 10/23 (43%), Positives = 15/23 (65%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHLWIH 159
+KC+VCEK+F ++L H H
Sbjct: 106 YKCNVCEKAFPSYQALGGHKASH 128
Score = 21.8 bits (44), Expect(2) = 2.7
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -1
Query: 164 IHSDNKRFVCVLCEKQFAQKVSLKCHMRSHH 72
I + K C +C K F +L H R H+
Sbjct: 158 IAASGKIHECSICHKVFPTGQALGGHKRCHY 188
>At2g46590.1 68415.m05811 Dof zinc finger protein DAG2 / Dof
affecting germination 2 (DAG2) identical to SP|Q9ZPY0
DOF zinc finger protein DAG2 (Dof affecting germination
2) {Arabidopsis thaliana}
Length = 357
Score = 28.7 bits (61), Expect = 2.8
Identities = 18/75 (24%), Positives = 31/75 (41%)
Frame = -2
Query: 427 LVESHGRPETSYTCPECTLVFQSRKLFYNHYKVSHTDDSFMCTCCGLRFESKNRLEDHD* 248
+ E RP+ CP C ++ +YN+Y S T + C C + L +
Sbjct: 57 VAERKARPQEKLNCPRCNST-NTKFCYYNNY--SLTQPRYFCKGCRRYWTEGGSLRNVPV 113
Query: 247 VTRTRKHSNVTSAKS 203
+RK+ +S+ S
Sbjct: 114 GGSSRKNKRSSSSSS 128
>At1g51220.1 68414.m05761 zinc finger (C2H2 type) protein (WIP5)
identical to WIP5 protein [Arabidopsis thaliana]
gi|18376498|emb|CAC86167; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 337
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = -1
Query: 227 FKCHVCEKSFLRKKSLTQHLWIHSDNKR 144
F C +C K+F R ++ H+W H R
Sbjct: 178 FTCPLCFKTFNRYNNMQMHMWGHGSQYR 205
Score = 27.5 bits (58), Expect = 6.4
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = -2
Query: 340 HYKVSHTDDSFMCTCCGLRFESKNRLEDHD 251
HYK H F C CG F K H+
Sbjct: 252 HYKRKHGSKPFACRMCGKAFAVKGDWRTHE 281
Score = 27.1 bits (57), Expect = 8.5
Identities = 17/52 (32%), Positives = 24/52 (46%)
Frame = -1
Query: 233 KTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRS 78
K F C +C K+F K H + K + C C F K SLK H+++
Sbjct: 260 KPFACRMCGKAFAVKGDWRTH--EKNCGKLWYC-SCGSDFKHKRSLKDHVKA 308
>At1g34370.2 68414.m04268 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 343 NHYKVSHTDDSFMCTCC 293
NHYK +H D SF C+ C
Sbjct: 322 NHYKRTHCDKSFTCSRC 338
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 137 CVLCEKQFAQKVSLKCHMRSH 75
C +C K F + +L+ HMR H
Sbjct: 246 CTICGKGFKRDANLRMHMRGH 266
>At1g34370.1 68414.m04267 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 499
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/17 (58%), Positives = 12/17 (70%)
Frame = -2
Query: 343 NHYKVSHTDDSFMCTCC 293
NHYK +H D SF C+ C
Sbjct: 322 NHYKRTHCDKSFTCSRC 338
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = -1
Query: 137 CVLCEKQFAQKVSLKCHMRSH 75
C +C K F + +L+ HMR H
Sbjct: 246 CTICGKGFKRDANLRMHMRGH 266
>At1g26610.1 68414.m03241 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 455
Score = 28.7 bits (61), Expect = 2.8
Identities = 10/29 (34%), Positives = 17/29 (58%)
Frame = -1
Query: 224 KCHVCEKSFLRKKSLTQHLWIHSDNKRFV 138
+C C K F+ K+L H+ HS+ ++ V
Sbjct: 94 RCRECGKGFVSSKALCGHMACHSEREKIV 122
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -1
Query: 149 KRFVCVLCEKQFAQKVSLKCHMRSH 75
++FVC C K+F SL H+R+H
Sbjct: 7 RKFVCKFCSKRFPCGKSLGGHIRTH 31
>At5g61470.1 68418.m07713 zinc finger (C2H2 type) family protein
contains Pfam profile: PF00096 zinc finger, C2H2 type
Length = 304
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 236 EKTFKCHVCEKSFLRKKSLTQHLWIHS 156
+KT C VC+KSF K+L H+ H+
Sbjct: 6 KKTKICQVCKKSFSNGKALGGHMRAHT 32
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 149 KRFVCVLCEKQFAQKVSLKCHMRSH 75
K +C +C+K F+ +L HMR+H
Sbjct: 7 KTKICQVCKKSFSNGKALGGHMRAH 31
>At5g54340.1 68418.m06767 zinc finger (C2H2 type) protein-related
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 244
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 152 NKRFVCVLCEKQFAQKVSLKCHMRSHHPDVNLE 54
NK ++C LC++ F +L H +H D LE
Sbjct: 44 NKIYICYLCKRAFPTPHALGGHGTTHKEDRELE 76
>At5g43170.1 68418.m05269 zinc finger (C2H2 type) protein 3 (AZF3)
identical to Cys2/His2-type zinc finger protein 3
[Arabidopsis thaliana] gi|6009889|dbj|BAA85109
Length = 193
Score = 28.3 bits (60), Expect = 3.7
Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 15/71 (21%)
Frame = -1
Query: 239 DEKTFKCHVCEKSFLRKKSLTQHLWIH------SDN---------KRFVCVLCEKQFAQK 105
++ ++KC VC K+F ++L H H +N K VC +C K FA
Sbjct: 71 EKPSYKCGVCYKTFSSYQALGGHKASHRSLYGGGENDKSTPSTAVKSHVCSVCGKSFATG 130
Query: 104 VSLKCHMRSHH 72
+L H R H+
Sbjct: 131 QALGGHKRCHY 141
>At5g37900.1 68418.m04566 seven in absentia (SINA) family protein
similar to SIAH1 protein [Brassica napus var. napus]
GI:7657876; contains Pfam profile PF03145: Seven in
absentia protein family
Length = 241
Score = 28.3 bits (60), Expect = 3.7
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 391 TCPECTLVFQSR-KLFYNHYKVSHTDDSFMCTCC 293
+CP + R + Y+HYK++H +S+ T C
Sbjct: 90 SCPSLDCEYSGRYEDLYDHYKLTHISNSYWTTNC 123
>At5g04340.1 68418.m00426 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 238
Score = 28.3 bits (60), Expect = 3.7
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = -1
Query: 233 KTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHHPDVNLE 54
K+ C +C KSF ++L H H + K V ++ V H+ S H +L
Sbjct: 146 KSHVCSICHKSFATGQALGGHKRCHYEGKNGGGVSSSVSNSEDVGSTSHVSSGHRGFDLN 205
Query: 53 M 51
+
Sbjct: 206 I 206
>At4g31480.1 68417.m04472 coatomer beta subunit, putative /
beta-coat protein, putative / beta-COP, putative similar
to Coatomer beta subunit (Beta-coat protein) (Beta-COP)
from {Rattus norvegicus} SP|P23514, {Mus musculus}
SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 971
Score = 28.3 bits (60), Expect = 3.7
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -1
Query: 215 VCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHH 72
+C K + + +W+ S + FV ++ EKQ + LK ++ H
Sbjct: 642 LCIKLLCHRNDEMKKIWLESCRQSFVKMISEKQLREMEELKAKTQTTH 689
>At3g01030.1 68416.m00004 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 353
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = -2
Query: 388 CPECTLVFQSRKLFYNHYKVSHTDDS 311
C EC F K +NH +V+H+++S
Sbjct: 80 CKECGKGFLYEKCLFNHLQVTHSEES 105
Score = 27.1 bits (57), Expect = 8.5
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = -1
Query: 224 KCHVCEKSFLRKKSLTQHLWI-HSDNKRFVCVLCEKQFAQK 105
+C C K FL +K L HL + HS+ + C Q+
Sbjct: 79 RCKECGKGFLYEKCLFNHLQVTHSEESTRRSLFCRFSIVQR 119
>At1g25250.1 68414.m03133 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type, domain, PROSITE:PS00028
Length = 362
Score = 28.3 bits (60), Expect = 3.7
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 185 SLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
SL+ + SD R+VC +C + F + +L+ H R H
Sbjct: 27 SLSPRTLLESD--RYVCEICNQGFQRDQNLQMHRRRH 61
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/28 (35%), Positives = 18/28 (64%)
Frame = -1
Query: 161 HSDNKRFVCVLCEKQFAQKVSLKCHMRS 78
HS +K++VC C K +A + K H+++
Sbjct: 112 HSVHKQWVCERCSKGYAVQSDYKAHLKT 139
>At1g03840.1 68414.m00365 zinc finger (C2H2 type) family protein
contains Zinc finger,C2H2 type,domain contains Pfam
domain, PF00096: Zinc finger, C2H2 type
Length = 506
Score = 28.3 bits (60), Expect = 3.7
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RF+C +C K F + +L+ H R H+
Sbjct: 69 RFLCEICGKGFQRDQNLQLHRRGHN 93
>At1g02030.1 68414.m00123 zinc finger (C2H2 type) family protein
identical to C2H2 zinc finger protein ZAT1 [Arabidopsis
thaliana] gi|1418321|emb|CAA67227; contains Pfam domain,
PF00096: Zinc finger, C2H2 type
Length = 267
Score = 27.9 bits (59), Expect = 4.9
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = -1
Query: 167 WIHSDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
W NK F C CEK F +L H SH
Sbjct: 152 WKKKRNKWFECETCEKVFKSYQALGGHRASH 182
Score = 23.4 bits (48), Expect(2) = 4.5
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = -1
Query: 233 KTFKCHVCEKSFLRKKSLTQHLWIH 159
K F+C CEK F ++L H H
Sbjct: 158 KWFECETCEKVFKSYQALGGHRASH 182
Score = 23.0 bits (47), Expect(2) = 4.5
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = -1
Query: 158 SDNKRFVCVLCEKQFAQKVSLKCHMRSH 75
S + C +C K F +L H RSH
Sbjct: 204 STSSHHECPICAKVFTSGQALGGHKRSH 231
>At5g44160.1 68418.m05404 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 466
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/25 (40%), Positives = 16/25 (64%)
Frame = -1
Query: 146 RFVCVLCEKQFAQKVSLKCHMRSHH 72
RF+C +C K F + +L+ H R H+
Sbjct: 65 RFLCEVCGKGFQRDQNLQLHRRGHN 89
>At5g40310.1 68418.m04890 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 348
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/49 (32%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -1
Query: 224 KCHVCEKSFLRKKSLTQHLWI--HSDNKRFVCVLCEKQFAQKVSLKCHM 84
KC C + F +K+ L +H+ I HS ++ C +C K SL+ H+
Sbjct: 7 KCGGCYRQFNKKEHLVEHMRISYHSVHEP-TCGICNKHCRSFDSLREHL 54
>At5g22990.1 68418.m02687 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 324
Score = 27.9 bits (59), Expect = 4.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = -2
Query: 394 YTCPECTLVFQSRKLFYNHYKVSH 323
YTCP+C VF + + F H H
Sbjct: 246 YTCPKCNSVFDTSQKFAAHISSMH 269
>At5g22890.1 68418.m02677 zinc finger (C2H2 type) family protein
contains Pfam domain PF00096: Zinc finger, C2H2 type
Length = 373
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Frame = -2
Query: 343 NHYKVSHTDDSFMCTCCGLR-FESKNRLEDHD 251
NHYK SH +MC C ++ F + L H+
Sbjct: 295 NHYKRSHCPKMYMCRRCSVKHFSVLSDLRTHE 326
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/26 (38%), Positives = 13/26 (50%)
Frame = -1
Query: 230 TFKCHVCEKSFLRKKSLTQHLWIHSD 153
T C +C K F R +L H+ H D
Sbjct: 216 THYCQICGKGFKRDANLRMHMRAHGD 241
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 137 CVLCEKQFAQKVSLKCHMRSH 75
C +C K F + +L+ HMR+H
Sbjct: 219 CQICGKGFKRDANLRMHMRAH 239
>At5g06650.1 68418.m00751 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 191
Score = 27.9 bits (59), Expect = 4.9
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -1
Query: 236 EKTFKCHVCEKSFLRKKSLTQHLWIHSDNKR 144
EK FKCH C ++F ++L H H ++
Sbjct: 52 EKRFKCHYCFRNFPTSQALGGHQNAHKRERQ 82
>At2g41940.1 68415.m05188 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 257
Score = 27.9 bits (59), Expect = 4.9
Identities = 16/59 (27%), Positives = 30/59 (50%)
Frame = -1
Query: 245 HTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHHP 69
+ + + F+CH C ++F ++L H H KR E+Q A++ S+ ++ H P
Sbjct: 89 NNNNRRFECHYCFRNFPTSQALGGHQNAH---KR------ERQHAKRGSMTSYLHHHQP 138
>At2g17600.1 68415.m02036 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 580
Score = 27.9 bits (59), Expect = 4.9
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = -1
Query: 248 GHTDEKTFKCHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLK 93
G EK + C VCE K L W +S NK + + E F V +K
Sbjct: 470 GEDAEKAYWCEVCE------KELNPREWFYSCNKCCITIHLECIFGSSVYIK 515
>At1g65985.1 68414.m07487 expressed protein contains Pfam profile
PF03140: Plant protein of unknown function
Length = 456
Score = 27.9 bits (59), Expect = 4.9
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 337 YKVSHTDDSFMCTCCGLRFESK 272
Y SHT DSF+ C GL+ E K
Sbjct: 182 YLDSHTLDSFILRCFGLKIEEK 203
>At5g55770.1 68418.m06951 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 695
Score = 27.5 bits (58), Expect = 6.4
Identities = 9/32 (28%), Positives = 16/32 (50%)
Frame = -1
Query: 221 CHVCEKSFLRKKSLTQHLWIHSDNKRFVCVLC 126
C +CE+ ++ K LW + R+ C +C
Sbjct: 576 CEICERKIVKVKERGNVLWNQKEALRYRCNVC 607
>At5g03620.1 68418.m00321 subtilase family protein contains
similarity to subtilisin-type serine endopeptidase XSP1
GI:6708179 from [Arabidopsis thaliana]
Length = 766
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/42 (30%), Positives = 19/42 (45%)
Frame = -2
Query: 541 FRRPKRKGNT*INKNGAWPFSCVYCGDRFLSWEQKQRHLVES 416
F RPK K N + +G W + + W+ + HLV S
Sbjct: 713 FERPKEKRNFKVVIDGVWDETMKGIVSASVEWDDSRGHLVRS 754
>At4g31490.1 68417.m04473 coatomer beta subunit, putative /
beta-coat protein, putative / beta-COP, putative similar
to Coatomer beta subunit (Beta-coat protein) (Beta-COP)
from {Rattus norvegicus} SP|P23514, {Mus musculus}
SP|Q9JIF7, {Homo sapiens} SP|P53618; contains Pfam
profile: PF01602 Adaptin N terminal region
Length = 948
Score = 27.5 bits (58), Expect = 6.4
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -1
Query: 215 VCEKSFLRKKSLTQHLWIHSDNKRFVCVLCEKQFAQKVSLKCHMRSHH 72
+C K + + +W+ S + FV ++ EKQ + LK ++ H
Sbjct: 619 LCIKLLCHRNVEMKKIWLESCRQSFVKMISEKQLREMEELKAKTQTTH 666
>At3g49940.1 68416.m05461 LOB domain protein 38 / lateral organ
boundaries domain protein 38 (LBD38) identical to
SP|Q9SN23 LOB domain protein 38 {Arabidopsis thaliana}
Length = 247
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = +1
Query: 334 CNGCRIVCVTETLMCILDTCTKFRDVRDSRLSAFVFV 444
CNGCR++ + CIL C ++ + +++ A VFV
Sbjct: 3 CNGCRVLRKGCSENCILRPCIQWIESPEAQGHATVFV 39
>At3g27970.1 68416.m03491 exonuclease family protein contains
exonuclease domain, Pfam:PF00929
Length = 354
Score = 27.5 bits (58), Expect = 6.4
Identities = 15/49 (30%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Frame = -1
Query: 224 KCHVCEKSFLRKKSLTQHLWI--HSDNKRFVCVLCEKQFAQKVSLKCHM 84
KC C + F + + L +H+ I HS ++ C +C+K SL+ H+
Sbjct: 16 KCAACYRQFNKLEHLVEHMKISYHSGHEP-TCGVCKKHCRSFESLREHL 63
>At1g55460.1 68414.m06343 Kin17 DNA-binding protein-related contains
similarity to zinc finger protein rts2 GB:U16133
GI:563244 from [Saccharomyces cerevisiae]
Length = 411
Score = 27.5 bits (58), Expect = 6.4
Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -1
Query: 209 EKSFLRKKSLTQHLWIHSDNK-RFVCVLCEKQFAQKVSLKCHMRS 78
+ FL K++ + K R+ C +C+KQ + KCH S
Sbjct: 3 KNDFLTPKAIANRIKAKGLQKLRWYCQMCQKQCRDENGFKCHCMS 47
>At5g25160.1 68418.m02983 zinc finger (C2H2 type) family protein
(ZFP3) identical to zinc finger protein, ZFP3
gi|790677|gb|AAA87299; contains Pfam domain, PF00096:
Zinc finger, C2H2 type
Length = 235
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -1
Query: 242 TDEKTFKCHVCEKSFLRKKSLTQHLWIH 159
T++K F C+ C+++F ++L H H
Sbjct: 56 TEQKLFSCNYCQRTFYSSQALGGHQNAH 83
>At5g10970.1 68418.m01275 zinc finger (C2H2 type) family protein
contains zinc finger, C2H2 type domain, Prosite:PS00028
Length = 272
Score = 27.1 bits (57), Expect = 8.5
Identities = 9/28 (32%), Positives = 17/28 (60%)
Frame = -1
Query: 242 TDEKTFKCHVCEKSFLRKKSLTQHLWIH 159
T++K F C+ C+++F ++L H H
Sbjct: 99 TEQKLFSCNYCQRTFYSSQALGGHQNAH 126
>At3g25510.1 68416.m03172 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1981
Score = 27.1 bits (57), Expect = 8.5
Identities = 10/34 (29%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = -2
Query: 352 LFYNHYKVSHTD-DSFMCTCCGLRFESKNRLEDH 254
L +++ +SH D D F+C C ++ ++E H
Sbjct: 437 LMFSYEALSHEDKDLFLCIACFFNYQKIKKVEKH 470
>At1g26590.1 68414.m03239 zinc finger (C2H2 type) family protein
contains Pfam domain, PF00096: Zinc finger, C2H2 type
Length = 361
Score = 27.1 bits (57), Expect = 8.5
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = -1
Query: 236 EKTFKCHVCEKSFLRKKSLTQHLWIHSD 153
E +F C C K+F K+L H+ IH++
Sbjct: 6 ENSFLCKYCYKTFPSGKALGGHIRIHTN 33
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,883,462
Number of Sequences: 28952
Number of extensions: 234898
Number of successful extensions: 981
Number of sequences better than 10.0: 73
Number of HSP's better than 10.0 without gapping: 783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 975
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1062855648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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