Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0461
         (665 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT024986-1|ABE01216.1|  338|Drosophila melanogaster IP12106p pro...    30   3.3  
AE014298-1677|AAF48086.1|  529|Drosophila melanogaster CG15221-P...    30   3.3  

>BT024986-1|ABE01216.1|  338|Drosophila melanogaster IP12106p
           protein.
          Length = 338

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = -1

Query: 398 MKHYTLTHFCLINLHYV----WILVLLTISSSIGVRGGEVEVLSL 276
           M    LT  CL+ LHYV     +++ LT+  +IG  GG V  +++
Sbjct: 203 MAWMVLTMICLVALHYVEQFALVVIALTVVMAIGNCGGLVSTIAM 247


>AE014298-1677|AAF48086.1|  529|Drosophila melanogaster CG15221-PA
           protein.
          Length = 529

 Score = 29.9 bits (64), Expect = 3.3
 Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = -1

Query: 398 MKHYTLTHFCLINLHYV----WILVLLTISSSIGVRGGEVEVLSL 276
           M    LT  CL+ LHYV     +++ LT+  +IG  GG V  +++
Sbjct: 394 MAWMVLTMICLVALHYVEQFALVVIALTVVMAIGNCGGLVSTIAM 438


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,478,935
Number of Sequences: 53049
Number of extensions: 280050
Number of successful extensions: 495
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 493
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 495
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2868730650
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)