Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0460
         (597 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   1.5  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    23   2.6  
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    22   4.5  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    22   4.5  
AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.           22   4.5  
AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory recept...    22   4.5  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    21   7.9  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.4 bits (48), Expect = 1.5
 Identities = 8/19 (42%), Positives = 10/19 (52%)
 Frame = +3

Query: 357 SIGANEWAGSNAGASVWKV 413
           S+G N WA   A    W+V
Sbjct: 519 SLGINPWANCTASTRCWEV 537


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = +3

Query: 510 IIEYTRMFLDVTTSYNSMEPGCAHE 584
           I + T+      T Y++ EP C HE
Sbjct: 337 IFQSTQYVRHKNTPYHTPEPDCIHE 361


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/18 (38%), Positives = 8/18 (44%)
 Frame = +3

Query: 372 EWAGSNAGASVWKVRGGL 425
           +W   NAG   W    GL
Sbjct: 232 QWIAGNAGTHFWHAHTGL 249


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/18 (38%), Positives = 8/18 (44%)
 Frame = +3

Query: 372 EWAGSNAGASVWKVRGGL 425
           +W   NAG   W    GL
Sbjct: 232 QWIAGNAGTHFWHAHTGL 249


>AY321476-1|AAQ23386.1|  253|Tribolium castaneum Ash protein.
          Length = 253

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 11/26 (42%), Positives = 16/26 (61%)
 Frame = -2

Query: 491 SVILLKRQTKNTKTDRETKRYLQPTP 414
           S+I+    T+ TKT  ++KR L P P
Sbjct: 29  SIIVSGSITQPTKTVIQSKRPLAPAP 54


>AM292359-1|CAL23171.2|  436|Tribolium castaneum gustatory receptor
           candidate 38 protein.
          Length = 436

 Score = 21.8 bits (44), Expect = 4.5
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 60  AYARFRSLFPFCYYKLFIYLL 122
           A+ +   + P+CY    IYL+
Sbjct: 208 AHFKIIQVVPYCYINCLIYLI 228


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)
 Frame = -3

Query: 412 TFHTLAPALLPAHSFAPIEAAILFE 338
           T   ++   L AH FA + A +LF+
Sbjct: 283 TLKKISQFQLDAHEFACLRAIVLFK 307


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,216
Number of Sequences: 336
Number of extensions: 3021
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15039504
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)