Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0460
         (597 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           27   0.46 
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   1.9  
AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    24   4.3  
AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA methy...    23   7.5  
AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450 CY...    23   9.9  

>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 27.1 bits (57), Expect = 0.46
 Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 542 HVQKHSRVFDNHFSFTVSVILLKRQTKNTKTDRETKRYLQPTPH-LPYTG 396
           HV +  ++ D+    TVS  +L R  K   + R  K +++PT H  P+ G
Sbjct: 116 HVSREDQLKDSS-GLTVSRAVLVRSCKEEPSKRTGKYWIKPTEHDEPFLG 164


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
 Frame = +2

Query: 287 GNTERLSKSEVAFAILLFEQNGGLDWRERMGGQQCRCQCMEGEGWAVNNASSPYQF*CF* 466
           GNT  + ++  A  I+    N  L   ERMGG            +AV+N  + Y +  + 
Sbjct: 23  GNTVEVKRAPSAEQIIFVRNNRALLIYERMGGSWSEVH-KRNNFFAVSNDDASYPWAVYD 81

Query: 467 FGVL-VRSPK 493
            G+L VR  K
Sbjct: 82  DGLLAVRKVK 91


>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 23.8 bits (49), Expect = 4.3
 Identities = 9/19 (47%), Positives = 10/19 (52%)
 Frame = +1

Query: 136 HPETRWNVRPTAPIYVPND 192
           HP   W V   AP  VP+D
Sbjct: 467 HPPVSWPVSSDAPTTVPSD 485


>AF532982-1|AAQ10289.1|  459|Anopheles gambiae putative RNA
           methylase protein.
          Length = 459

 Score = 23.0 bits (47), Expect = 7.5
 Identities = 9/30 (30%), Positives = 15/30 (50%)
 Frame = -2

Query: 227 FCGVGTRIDLASSFGTYIGAVGRTFHLVSG 138
           F G G+ +  A+ FG Y+      + +V G
Sbjct: 225 FAGSGSLLVAAAKFGAYVAGADIDYMIVHG 254


>AF487533-1|AAL93294.1|  531|Anopheles gambiae cytochrome P450
           CYP9K1 protein.
          Length = 531

 Score = 22.6 bits (46), Expect = 9.9
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 39  GLWCPISAYARFRSLFP 89
           GLW P +A  R   LFP
Sbjct: 425 GLWIPAAAIMRDPQLFP 441


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,209
Number of Sequences: 2352
Number of extensions: 13467
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 57609459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)