Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0458
         (336 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   3.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   6.0  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     20   6.0  
AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450 ...    20   6.0  

>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.0 bits (42), Expect = 3.5
 Identities = 10/24 (41%), Positives = 14/24 (58%), Gaps = 1/24 (4%)
 Frame = -2

Query: 308 QC-LCNKILSYTSLEQCHSRQAPG 240
           QC +C+++LS  S  Q H R   G
Sbjct: 136 QCVICHRVLSCKSALQMHYRTHTG 159


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 72  APRPFQFHQDRW 107
           A  PF +H D+W
Sbjct: 927 ATGPFAYHGDQW 938


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 6/13 (46%), Positives = 10/13 (76%)
 Frame = -3

Query: 142 IS*DSTSLYWSSH 104
           +S DST+++W  H
Sbjct: 126 LSSDSTTIHWHGH 138


>AF263515-1|AAF74207.1|  126|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 126

 Score = 20.2 bits (40), Expect = 6.0
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 54  HY*SLVAPRPFQFHQDRW 107
           HY  ++ P P +F  DR+
Sbjct: 95  HYNPVIYPEPEKFDPDRF 112


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,671
Number of Sequences: 336
Number of extensions: 1566
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  6579502
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)