Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0458
         (336 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   3.1  
AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha ...    22   7.1  
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    21   9.4  

>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 13/51 (25%), Positives = 21/51 (41%)
 Frame = -1

Query: 165  PVIGVSKPSVKTRPRYIGLPICPGETGKVSGPPVINNDKKNILVFRVFIKY 13
            P IG + P+V+   + +   I P        PP +  D + +   R F  Y
Sbjct: 1101 PRIGPA-PAVEPAKKTLVATILPNSAKPAQQPPPLRRDARELASMRSFSPY 1150


>AY027891-1|AAK15783.1|  801|Anopheles gambiae collagen IV alpha 1
           chain precursor protein.
          Length = 801

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 8/15 (53%), Positives = 9/15 (60%)
 Frame = +2

Query: 71  GPETFPVSPGQMGRP 115
           GP  FP  PG+ G P
Sbjct: 247 GPRGFPGRPGEKGVP 261


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 221 LKSCPKFPEPDANGIAQD 274
           LK C + P PD  GI  D
Sbjct: 196 LKLCQQMPAPDDFGIHYD 213


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 344,868
Number of Sequences: 2352
Number of extensions: 6546
Number of successful extensions: 56
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 56
effective length of database: 432,267
effective search space used: 23774685
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)