Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0458
         (336 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014298-1586|ABI30977.1|  466|Drosophila melanogaster CG34143-P...    31   0.37 
AE014298-1585|AAF48021.2|  553|Drosophila melanogaster CG34143-P...    31   0.37 

>AE014298-1586|ABI30977.1|  466|Drosophila melanogaster CG34143-PB,
           isoform B protein.
          Length = 466

 Score = 31.1 bits (67), Expect = 0.37
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +2

Query: 143 GLLTPITGIVFLFLKMVKNQCKFVV*LKSCPK--FPEPDANG 262
           GLLT +TG+ FL  +M++ +  F + L+   K  F E  ANG
Sbjct: 201 GLLTRVTGVDFLVAQMLRERLNFTMLLQQPEKKYFGERSANG 242


>AE014298-1585|AAF48021.2|  553|Drosophila melanogaster CG34143-PA,
           isoform A protein.
          Length = 553

 Score = 31.1 bits (67), Expect = 0.37
 Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
 Frame = +2

Query: 143 GLLTPITGIVFLFLKMVKNQCKFVV*LKSCPK--FPEPDANG 262
           GLLT +TG+ FL  +M++ +  F + L+   K  F E  ANG
Sbjct: 201 GLLTRVTGVDFLVAQMLRERLNFTMLLQQPEKKYFGERSANG 242


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,522,329
Number of Sequences: 53049
Number of extensions: 273241
Number of successful extensions: 549
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 520
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 549
length of database: 24,988,368
effective HSP length: 75
effective length of database: 21,009,693
effective search space used: 756348948
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)