Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0458
         (336 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical pr...    31   0.27 
Z81592-9|CAB63315.1|  945|Caenorhabditis elegans Hypothetical pr...    29   0.83 
Z69794-2|CAA93681.1|  786|Caenorhabditis elegans Hypothetical pr...    26   7.7  

>Z68000-3|CAA91971.1| 1225|Caenorhabditis elegans Hypothetical
           protein C05C9.3 protein.
          Length = 1225

 Score = 30.7 bits (66), Expect = 0.27
 Identities = 13/35 (37%), Positives = 19/35 (54%)
 Frame = +3

Query: 30  ERLICFFYHY*SLVAPRPFQFHQDRWEDQYSEVES 134
           ER I   YH+  ++ P   + H  +W+  Y EVES
Sbjct: 183 ERAIVLLYHFPQIILPCIGKKHFKKWDQYYWEVES 217


>Z81592-9|CAB63315.1|  945|Caenorhabditis elegans Hypothetical
           protein T16G1.9 protein.
          Length = 945

 Score = 29.1 bits (62), Expect = 0.83
 Identities = 13/39 (33%), Positives = 20/39 (51%)
 Frame = -1

Query: 150 SKPSVKTRPRYIGLPICPGETGKVSGPPVINNDKKNILV 34
           S+P  + +    GLP  PG  G ++ PP I  D  N ++
Sbjct: 861 SQPIDRKKSFEEGLPYSPGRVGVINLPPAIRTDLANTML 899


>Z69794-2|CAA93681.1|  786|Caenorhabditis elegans Hypothetical
           protein R03G8.4 protein.
          Length = 786

 Score = 25.8 bits (54), Expect = 7.7
 Identities = 14/56 (25%), Positives = 29/56 (51%)
 Frame = -3

Query: 283 HIQVLSNAIRVRLREFRTRFQLNNKFTLIFNHFKK*KDNSSYWRK*AIS*DSTSLY 116
           +++ L    R+ + +F  R Q N+K++L     K  +D   Y+R  +   + T++Y
Sbjct: 102 NLKNLIQYFRLAITKFENRQQTNSKYSLYGKIGKIREDGEGYYRTISPGLNETTMY 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,657,517
Number of Sequences: 27780
Number of extensions: 147771
Number of successful extensions: 324
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 324
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 418861482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)