Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0458
         (336 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.          22   2.3  
DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like recept...    22   2.3  
DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.              20   7.0  

>L10430-1|AAA27731.1|  150|Apis mellifera transposase protein.
          Length = 150

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 11/32 (34%), Positives = 19/32 (59%)
 Frame = -3

Query: 283 HIQVLSNAIRVRLREFRTRFQLNNKFTLIFNH 188
           H+  L+NAI  +      RF+L N+  ++F+H
Sbjct: 98  HLTKLNNAIEEK------RFELTNRKGVVFHH 123


>DQ869051-1|ABJ09598.1|  581|Apis mellifera pyrokinin-like receptor
           2 protein.
          Length = 581

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 10/35 (28%), Positives = 20/35 (57%)
 Frame = -2

Query: 179 IERQFQLLA*VSHQLRLDLAILVFPSVLVKLERSR 75
           IE  F++   +   L + + I+++  + +KL RSR
Sbjct: 218 IEHAFEISTMLFFVLPMTIIIVLYILIAIKLRRSR 252


>DQ435333-1|ABD92648.1|  135|Apis mellifera OBP16 protein.
          Length = 135

 Score = 20.2 bits (40), Expect = 7.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = -1

Query: 108 PICPGETG 85
           PIC GETG
Sbjct: 31  PICVGETG 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,551
Number of Sequences: 438
Number of extensions: 2050
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 50
effective length of database: 124,443
effective search space used:  7591023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)