Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0456
         (295 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_O49456 Cluster: Putative uncharacterized protein F20O9....    32   2.8  

>UniRef50_O49456 Cluster: Putative uncharacterized protein F20O9.150;
            n=1; Arabidopsis thaliana|Rep: Putative uncharacterized
            protein F20O9.150 - Arabidopsis thaliana (Mouse-ear
            cress)
          Length = 1103

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 24/91 (26%), Positives = 41/91 (45%), Gaps = 2/91 (2%)
 Frame = -1

Query: 268  IYIVYLGPVGAHRHHQRKCRYAPREMSSQFYS--TMIALPFKLKRMVPIYXXXXXXXXSI 95
            + IV     GAHR   R C Y    ++SQ +   T +A+P  L  +V +          I
Sbjct: 838  VLIVLSHNAGAHR--SRVCAYGKGSLNSQSFPLRTALAMPTALAGIVTLLHACLDMKSII 895

Query: 94   LKVDR*LLVFISVSSQPEQLLSMPARIYLVS 2
            L     +L F+ ++ QP  +L++   +  +S
Sbjct: 896  LGKYHYVLYFLVLAMQPRMMLTVDQSLKPIS 926


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 255,849,942
Number of Sequences: 1657284
Number of extensions: 3750610
Number of successful extensions: 6545
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 6465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6543
length of database: 575,637,011
effective HSP length: 75
effective length of database: 451,340,711
effective search space used: 9929495642
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)