Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= ce--0453
         (520 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protei...    25   0.40 
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    25   0.40 
AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless pr...    24   0.70 
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    23   1.6  
DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory pro...    23   2.1  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   2.8  
U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse ...    21   5.0  
EF592536-1|ABQ95982.1|  598|Tribolium castaneum beta-N-acetylglu...    21   5.0  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.5  
AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory recept...    21   6.5  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   6.5  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   8.7  

>L01616-1|AAA30096.1|   74|Tribolium castaneum zinc finger protein
           protein.
          Length = 74

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -1

Query: 520 KPLPLHTAHDRSRRDVHLLTRHRCHNIRR 434
           KP      H R  RD HL T  R H   R
Sbjct: 8   KPFECQECHKRFTRDHHLKTHMRLHTGER 36


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 25.0 bits (52), Expect = 0.40
 Identities = 12/29 (41%), Positives = 12/29 (41%)
 Frame = -1

Query: 520 KPLPLHTAHDRSRRDVHLLTRHRCHNIRR 434
           KP      H R  RD HL T  R H   R
Sbjct: 161 KPFECQECHKRFTRDHHLKTHMRLHTGER 189


>AF228509-1|AAF69136.1|  325|Tribolium castaneum prothoraxless
           protein.
          Length = 325

 Score = 24.2 bits (50), Expect = 0.70
 Identities = 13/50 (26%), Positives = 21/50 (42%)
 Frame = +2

Query: 185 GPSPELENGGDRKGDSQSRYRRFVAAAEAHRTVIAAEALSLIVKAVTAIG 334
           GP  +++    R     S +    AA   H+T +  ++  L   AVT  G
Sbjct: 100 GPQQQMDGQEYRPDSPSSMHMANTAAPNGHQTQVVYDSCKLQAAAVTQNG 149


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 13/50 (26%), Positives = 20/50 (40%)
 Frame = +2

Query: 185 GPSPELENGGDRKGDSQSRYRRFVAAAEAHRTVIAAEALSLIVKAVTAIG 334
           GP  +++    R     S +    AA   H+T +   +  L   AVT  G
Sbjct: 98  GPQQQMDGQEYRPDSPSSMHMANTAAPNGHQTQVVYASCKLQAAAVTQNG 147


>DQ855503-1|ABH88190.1|  124|Tribolium castaneum chemosensory
           protein 17 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/28 (42%), Positives = 17/28 (60%), Gaps = 2/28 (7%)
 Frame = +2

Query: 179 KDGPS--PELENGGDRKGDSQSRYRRFV 256
           K+ PS   EL+   D KG+ +SRY  F+
Sbjct: 91  KNKPSWWQELQEKYDPKGEYKSRYNHFL 118


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 194 DSVHLFCNRLLYRSRAKPAKYLLAER 117
           D V +FCNR L R +    K   AER
Sbjct: 103 DKVTVFCNRDLGREKQFIVKLPSAER 128


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 194 DSVHLFCNRLLYRSRAKPAKYLLAER 117
           D V +FCNR L R +    K   AER
Sbjct: 103 DKVTVFCNRDLGREKQFIVKLPSAER 128


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 194 DSVHLFCNRLLYRSRAKPAKYLLAER 117
           D V +FCNR L R +    K   AER
Sbjct: 103 DKVTVFCNRDLGREKQFIVKLPSAER 128


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = -3

Query: 194 DSVHLFCNRLLYRSRAKPAKYLLAER 117
           D V +FCNR L R +    K   AER
Sbjct: 103 DKVTVFCNRDLGREKQFIVKLPSAER 128


>U09586-2|AAC47271.1|  712|Tribolium castaneum protease, reverse
           transcriptase andRNase H protein.
          Length = 712

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -1

Query: 511 PLHTAHDRSRRDVHLLTRHRC 449
           PL       R+ +HLL  +RC
Sbjct: 262 PLKIPEAEKRKLIHLLQEYRC 282


>EF592536-1|ABQ95982.1|  598|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG1 protein.
          Length = 598

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +2

Query: 461 CQKVHITPRTVVSGM 505
           CQK  ITP T  +G+
Sbjct: 34  CQKAPITPDTEATGL 48


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 224 PYGRHRSLTLDSVHLFCNRLL 162
           P GR     L S+H F N ++
Sbjct: 229 PQGRKEQKVLKSLHSFSNNVI 249


>AM292354-1|CAL23166.1|  321|Tribolium castaneum gustatory receptor
           candidate 33 protein.
          Length = 321

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/33 (27%), Positives = 16/33 (48%)
 Frame = +3

Query: 51  LSPYITQCNPLSSRLWYTSLLRPFCKKILRRFR 149
           L  Y T  N  S +LW  S++  +   ++  F+
Sbjct: 6   LEIYFTVANKFSGKLWPISIVLIYTVGVVYSFK 38


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = -3

Query: 224 PYGRHRSLTLDSVHLFCNRLL 162
           P GR     L S+H F N ++
Sbjct: 229 PQGRKEQKVLKSLHSFSNNVI 249


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -1

Query: 448 HNIRRHRYGSHAYFGSRHIV 389
           HNI  + Y SH+ + S +++
Sbjct: 340 HNIAHNPYPSHSIYPSSNLM 359


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,729
Number of Sequences: 336
Number of extensions: 2148
Number of successful extensions: 17
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)