Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= ce--0453
(520 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|ch... 31 0.10
SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|ch... 31 0.10
SPCC622.16c |epe1||Jmjc domain chromatin associated protein Epe1... 27 1.7
SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2 |Schizo... 27 2.2
SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|... 27 2.2
SPBC839.11c |hut1||uridine diphosphate-N-acetylglucosamine trans... 27 2.2
SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces po... 26 2.9
SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces p... 26 2.9
SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyc... 25 5.1
SPCC777.14 |prp4||serine/threonine protein kinase Prp4|Schizosac... 25 6.8
>SPAC27D7.10c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 31.1 bits (67), Expect = 0.10
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -2
Query: 369 VRSVLVITTLSAPIAVTA--LTIRESASAAMTVRCASAAATKRLYRLWESPLR----SPP 208
V S +T S IA T + + +ASA T + ASAAA+ +Y L+ +R + P
Sbjct: 186 VSSSAKASTSSGAIAYTTKCVVVPVTASATATAKAASAAASSAVYPLFPHGIRLIDSANP 245
Query: 207 FSNSG 193
SNSG
Sbjct: 246 SSNSG 250
>SPAC27D7.09c |||But2 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 383
Score = 31.1 bits (67), Expect = 0.10
Identities = 24/65 (36%), Positives = 34/65 (52%), Gaps = 6/65 (9%)
Frame = -2
Query: 369 VRSVLVITTLSAPIAVTA--LTIRESASAAMTVRCASAAATKRLYRLWESPLR----SPP 208
V S +T S IA T + + +ASA T + ASAAA+ +Y L+ +R + P
Sbjct: 186 VSSSAKASTSSGAIAYTTKCVVVPVTASATATAKAASAAASSAVYPLFPHGIRLIDSANP 245
Query: 207 FSNSG 193
SNSG
Sbjct: 246 SSNSG 250
>SPCC622.16c |epe1||Jmjc domain chromatin associated protein
Epe1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 948
Score = 27.1 bits (57), Expect = 1.7
Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
Frame = +2
Query: 74 QPALVATLVHVS-VTP--VLQEDTSPVSPVTDKEDDCRKDGPSPELENGGDRKGDSQSRY 244
Q +AT H+S + P V DTSPVS T+ +D D PS + +R+ ++R
Sbjct: 60 QSTPIATKSHLSCINPQYVNPFDTSPVSVDTEFQDTYLLDAPSFAQPHFSERQSVDKTRS 119
Query: 245 R 247
R
Sbjct: 120 R 120
>SPCC1020.01c |pma2|SPCC1393.01|P-type proton ATPase Pma2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1010
Score = 26.6 bits (56), Expect = 2.2
Identities = 14/58 (24%), Positives = 28/58 (48%)
Frame = -2
Query: 429 GTVRMPILVAVILSVLKSFPVRSVLVITTLSAPIAVTALTIRESASAAMTVRCASAAA 256
GT+ + +++ +L + + RSV + L +A+T + + A +T A AA
Sbjct: 380 GTILLVLVILTLLCIYTAAFYRSVRLAALLEYTLAITIIGVPVGLPAVVTTTMAVGAA 437
>SPAC17D4.03c |||membrane transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 732
Score = 26.6 bits (56), Expect = 2.2
Identities = 10/30 (33%), Positives = 19/30 (63%)
Frame = +2
Query: 83 LVATLVHVSVTPVLQEDTSPVSPVTDKEDD 172
++A L+ VSV P++++ + VTD E +
Sbjct: 622 IIAALIFVSVLPLIKDSAKNLLSVTDPESE 651
>SPBC839.11c |hut1||uridine diphosphate-N-acetylglucosamine
transporter Hut1 |Schizosaccharomyces pombe|chr
2|||Manual
Length = 322
Score = 26.6 bits (56), Expect = 2.2
Identities = 12/66 (18%), Positives = 31/66 (46%)
Frame = -2
Query: 519 SRCLSIPLTTVLGVMCTF*HVTVAIISVATGTVRMPILVAVILSVLKSFPVRSVLVITTL 340
S +S L++ G F H++ + + +P++ + + FP L++T +
Sbjct: 82 SIAISASLSSYFGYASMF-HLSYPTVILGKSCKLLPVIALHVFVYKRKFPPHKYLIVTMI 140
Query: 339 SAPIAV 322
+A +++
Sbjct: 141 TAGVSI 146
>SPAC12G12.07c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 2.9
Identities = 11/16 (68%), Positives = 11/16 (68%)
Frame = +1
Query: 256 RGGRGAPNGHRGRGAF 303
RGGRG G RGRG F
Sbjct: 365 RGGRGFYRGGRGRGGF 380
>SPAC1002.13c |psu1||beta-glucosidase Psu1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 417
Score = 26.2 bits (55), Expect = 2.9
Identities = 29/95 (30%), Positives = 42/95 (44%), Gaps = 2/95 (2%)
Frame = -2
Query: 366 RSVLVITTLSAPIAVTALTIRESASAAMTVRCASAAATKRLYRLWESPLRS--PPFSNSG 193
R V V+T S A T +T+ +ASA T A AAT S + + P ++S
Sbjct: 31 RDVSVVT--SKVYAYTTVTLEAAASAISTNGAAKEAATAAGDAETTSSVAASVTPAASSS 88
Query: 192 LGPSFLQSSSLSVTGETGEVSSCRTGVTETCTRVA 88
+ S +S SV VSS + V ++ T A
Sbjct: 89 VAASVTPVASSSVAASVTPVSS--SAVVDSATSAA 121
>SPAPB24D3.10c |agl1|agl|alpha-glucosidase Agl1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 969
Score = 25.4 bits (53), Expect = 5.1
Identities = 13/50 (26%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -2
Query: 333 PIAVTALTIRESASAAMTVRCASAAATKRLYR--LWESPLRSPPFSNSGL 190
P+ +T E+ ++++ A+ + R LW++PL SP ++N+ L
Sbjct: 94 PLLFLNVTYEEADRVHISIKDANNTQFQFTSRKDLWDAPLYSPSYNNTNL 143
>SPCC777.14 |prp4||serine/threonine protein kinase
Prp4|Schizosaccharomyces pombe|chr 3|||Manual
Length = 477
Score = 25.0 bits (52), Expect = 6.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = +2
Query: 152 VTDKEDDCRKDGPSPELENGGDRKGDS 232
+ D EDD D PSP ++ KG S
Sbjct: 101 IEDTEDDMFADSPSPSVKRQNTGKGIS 127
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,850,862
Number of Sequences: 5004
Number of extensions: 35095
Number of successful extensions: 124
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 122
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 124
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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